Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2H1M:B9:B10
Extra
PDB:
ATOM 1 O3' A A 8 -8.549 22.841 -5.366 1.00 51.62 O
ATOM 2 P A A 9 -9.105 23.031 -6.852 1.00 52.30 P
ATOM 3 OP1 A A 9 -8.125 22.399 -7.764 1.00 52.40 O
ATOM 4 OP2 A A 9 -9.461 24.457 -7.042 1.00 52.17 O
ATOM 5 O5' A A 9 -10.460 22.174 -6.839 1.00 52.43 O
ATOM 6 C5' A A 9 -10.415 20.755 -6.695 1.00 52.90 C
ATOM 7 C4' A A 9 -11.769 20.191 -6.308 1.00 53.31 C
ATOM 8 O4' A A 9 -12.246 20.846 -5.109 1.00 53.55 O
ATOM 9 C3' A A 9 -12.886 20.436 -7.311 1.00 53.63 C
ATOM 10 O3' A A 9 -12.856 19.483 -8.362 1.00 53.95 O
ATOM 11 C2' A A 9 -14.133 20.308 -6.439 1.00 53.70 C
ATOM 12 O2' A A 9 -14.512 18.972 -6.157 1.00 53.79 O
ATOM 13 C1' A A 9 -13.656 21.009 -5.171 1.00 53.62 C
ATOM 14 N9 A A 9 -13.999 22.434 -5.122 1.00 53.57 N
ATOM 15 C8 A A 9 -13.188 23.500 -5.405 1.00 53.58 C
ATOM 16 N7 A A 9 -13.770 24.669 -5.269 1.00 53.52 N
ATOM 17 C5 A A 9 -15.056 24.349 -4.870 1.00 53.52 C
ATOM 18 C6 A A 9 -16.182 25.141 -4.556 1.00 53.55 C
ATOM 19 N6 A A 9 -16.175 26.476 -4.605 1.00 53.62 N
ATOM 20 N1 A A 9 -17.321 24.511 -4.191 1.00 53.56 N
ATOM 21 C2 A A 9 -17.331 23.171 -4.143 1.00 53.57 C
ATOM 22 N3 A A 9 -16.337 22.321 -4.413 1.00 53.56 N
ATOM 23 C4 A A 9 -15.217 22.977 -4.775 1.00 53.54 C
ATOM 24 P A A 10 -13.271 19.941 -9.839 1.00 54.29 P
ATOM 25 OP1 A A 10 -12.813 18.884 -10.771 1.00 54.18 O
ATOM 26 OP2 A A 10 -12.810 21.337 -10.038 1.00 53.99 O
ATOM 27 O5' A A 10 -14.878 19.956 -9.774 1.00 54.24 O
TER
ATOM 1 O3' A B 9 -12.856 19.483 -8.362 1.00 53.95 O
ATOM 2 P A B 10 -13.271 19.941 -9.839 1.00 54.29 P
ATOM 3 OP1 A B 10 -12.813 18.884 -10.771 1.00 54.18 O
ATOM 4 OP2 A B 10 -12.810 21.337 -10.038 1.00 53.99 O
ATOM 5 O5' A B 10 -14.878 19.956 -9.774 1.00 54.24 O
ATOM 6 C5' A B 10 -15.649 18.764 -10.006 1.00 53.78 C
ATOM 7 C4' A B 10 -17.091 18.888 -9.534 1.00 53.08 C
ATOM 8 O4' A B 10 -17.129 19.363 -8.161 1.00 53.18 O
ATOM 9 C3' A B 10 -17.965 19.903 -10.264 1.00 52.32 C
ATOM 10 O3' A B 10 -18.458 19.444 -11.509 1.00 50.81 O
ATOM 11 C2' A B 10 -19.075 20.103 -9.241 1.00 52.71 C
ATOM 12 O2' A B 10 -19.934 18.987 -9.104 1.00 52.87 O
ATOM 13 C1' A B 10 -18.200 20.282 -8.010 1.00 53.25 C
ATOM 14 N9 A B 10 -17.690 21.651 -7.936 1.00 53.42 N
ATOM 15 C8 A B 10 -16.428 22.100 -8.223 1.00 53.52 C
ATOM 16 N7 A B 10 -16.265 23.392 -8.077 1.00 53.50 N
ATOM 17 C5 A B 10 -17.513 23.822 -7.672 1.00 53.46 C
ATOM 18 C6 A B 10 -18.010 25.097 -7.349 1.00 53.49 C
ATOM 19 N6 A B 10 -17.252 26.197 -7.397 1.00 53.49 N
ATOM 20 N1 A B 10 -19.309 25.194 -6.979 1.00 53.55 N
ATOM 21 C2 A B 10 -20.061 24.084 -6.939 1.00 53.54 C
ATOM 22 N3 A B 10 -19.702 22.830 -7.220 1.00 53.46 N
ATOM 23 C4 A B 10 -18.406 22.768 -7.583 1.00 53.46 C
ATOM 24 P U B 11 -18.624 20.513 -12.689 1.00 49.67 P
ATOM 25 OP1 U B 11 -18.877 19.747 -13.931 1.00 49.50 O
ATOM 26 OP2 U B 11 -17.493 21.468 -12.622 1.00 49.70 O
ATOM 27 O5' U B 11 -19.934 21.340 -12.283 1.00 48.36 O
TER
ATOM 2 P A A 9 -9.105 23.031 -6.852 1.00 52.30 P
ATOM 3 OP1 A A 9 -8.125 22.399 -7.764 1.00 52.40 O
ATOM 4 OP2 A A 9 -9.461 24.457 -7.042 1.00 52.17 O
ATOM 5 O5' A A 9 -10.460 22.174 -6.839 1.00 52.43 O
ATOM 6 C5' A A 9 -10.415 20.755 -6.695 1.00 52.90 C
ATOM 7 C4' A A 9 -11.769 20.191 -6.308 1.00 53.31 C
ATOM 8 O4' A A 9 -12.246 20.846 -5.109 1.00 53.55 O
ATOM 9 C3' A A 9 -12.886 20.436 -7.311 1.00 53.63 C
ATOM 10 O3' A A 9 -12.856 19.483 -8.362 1.00 53.95 O
ATOM 11 C2' A A 9 -14.133 20.308 -6.439 1.00 53.70 C
ATOM 12 O2' A A 9 -14.512 18.972 -6.157 1.00 53.79 O
ATOM 13 C1' A A 9 -13.656 21.009 -5.171 1.00 53.62 C
ATOM 14 N9 A A 9 -13.999 22.434 -5.122 1.00 53.57 N
ATOM 15 C8 A A 9 -13.188 23.500 -5.405 1.00 53.58 C
ATOM 16 N7 A A 9 -13.770 24.669 -5.269 1.00 53.52 N
ATOM 17 C5 A A 9 -15.056 24.349 -4.870 1.00 53.52 C
ATOM 18 C6 A A 9 -16.182 25.141 -4.556 1.00 53.55 C
ATOM 19 N6 A A 9 -16.175 26.476 -4.605 1.00 53.62 N
ATOM 20 N1 A A 9 -17.321 24.511 -4.191 1.00 53.56 N
ATOM 21 C2 A A 9 -17.331 23.171 -4.143 1.00 53.57 C
ATOM 22 N3 A A 9 -16.337 22.321 -4.413 1.00 53.56 N
ATOM 23 C4 A A 9 -15.217 22.977 -4.775 1.00 53.54 C
ATOM 24 P A A 10 -13.271 19.941 -9.839 1.00 54.29 P
ATOM 25 OP1 A A 10 -12.813 18.884 -10.771 1.00 54.18 O
ATOM 26 OP2 A A 10 -12.810 21.337 -10.038 1.00 53.99 O
ATOM 27 O5' A A 10 -14.878 19.956 -9.774 1.00 54.24 O
TER
ATOM 1 O3' A B 9 -12.856 19.483 -8.362 1.00 53.95 O
ATOM 2 P A B 10 -13.271 19.941 -9.839 1.00 54.29 P
ATOM 3 OP1 A B 10 -12.813 18.884 -10.771 1.00 54.18 O
ATOM 4 OP2 A B 10 -12.810 21.337 -10.038 1.00 53.99 O
ATOM 5 O5' A B 10 -14.878 19.956 -9.774 1.00 54.24 O
ATOM 6 C5' A B 10 -15.649 18.764 -10.006 1.00 53.78 C
ATOM 7 C4' A B 10 -17.091 18.888 -9.534 1.00 53.08 C
ATOM 8 O4' A B 10 -17.129 19.363 -8.161 1.00 53.18 O
ATOM 9 C3' A B 10 -17.965 19.903 -10.264 1.00 52.32 C
ATOM 10 O3' A B 10 -18.458 19.444 -11.509 1.00 50.81 O
ATOM 11 C2' A B 10 -19.075 20.103 -9.241 1.00 52.71 C
ATOM 12 O2' A B 10 -19.934 18.987 -9.104 1.00 52.87 O
ATOM 13 C1' A B 10 -18.200 20.282 -8.010 1.00 53.25 C
ATOM 14 N9 A B 10 -17.690 21.651 -7.936 1.00 53.42 N
ATOM 15 C8 A B 10 -16.428 22.100 -8.223 1.00 53.52 C
ATOM 16 N7 A B 10 -16.265 23.392 -8.077 1.00 53.50 N
ATOM 17 C5 A B 10 -17.513 23.822 -7.672 1.00 53.46 C
ATOM 18 C6 A B 10 -18.010 25.097 -7.349 1.00 53.49 C
ATOM 19 N6 A B 10 -17.252 26.197 -7.397 1.00 53.49 N
ATOM 20 N1 A B 10 -19.309 25.194 -6.979 1.00 53.55 N
ATOM 21 C2 A B 10 -20.061 24.084 -6.939 1.00 53.54 C
ATOM 22 N3 A B 10 -19.702 22.830 -7.220 1.00 53.46 N
ATOM 23 C4 A B 10 -18.406 22.768 -7.583 1.00 53.46 C
ATOM 24 P U B 11 -18.624 20.513 -12.689 1.00 49.67 P
ATOM 25 OP1 U B 11 -18.877 19.747 -13.931 1.00 49.50 O
ATOM 26 OP2 U B 11 -17.493 21.468 -12.622 1.00 49.70 O
ATOM 27 O5' U B 11 -19.934 21.340 -12.283 1.00 48.36 O
TER
Atoms:
OP1: (-8.125,22.399,-7.764)
OP2: (-9.461,24.457,-7.042)
C3': (-12.886,20.436,-7.311)
C1': (-13.656,21.009,-5.171)
C5': (-10.415,20.755,-6.695)
O4': (-12.246,20.846,-5.109)
C8: (-13.188,23.500,-5.405)
O2': (-14.512,18.972,-6.157)
C6: (-16.182,25.141,-4.556)
C5: (-15.056,24.349,-4.870)
C4: (-15.217,22.977,-4.775)
P: (-9.105,23.031,-6.852)
C4': (-11.769,20.191,-6.308)
C2': (-14.133,20.308,-6.439)
C2: (-17.331,23.171,-4.143)
N1: (-17.321,24.511,-4.191)
N3: (-16.337,22.321,-4.413)
N6: (-16.175,26.476,-4.605)
N7: (-13.770,24.669,-5.269)
N9: (-13.999,22.434,-5.122)
O5': (-10.460,22.174,-6.839)
O3': (-12.856,19.483,-8.362)
OP2: (-9.461,24.457,-7.042)
C3': (-12.886,20.436,-7.311)
C1': (-13.656,21.009,-5.171)
C5': (-10.415,20.755,-6.695)
O4': (-12.246,20.846,-5.109)
C8: (-13.188,23.500,-5.405)
O2': (-14.512,18.972,-6.157)
C6: (-16.182,25.141,-4.556)
C5: (-15.056,24.349,-4.870)
C4: (-15.217,22.977,-4.775)
P: (-9.105,23.031,-6.852)
C4': (-11.769,20.191,-6.308)
C2': (-14.133,20.308,-6.439)
C2: (-17.331,23.171,-4.143)
N1: (-17.321,24.511,-4.191)
N3: (-16.337,22.321,-4.413)
N6: (-16.175,26.476,-4.605)
N7: (-13.770,24.669,-5.269)
N9: (-13.999,22.434,-5.122)
O5': (-10.460,22.174,-6.839)
O3': (-12.856,19.483,-8.362)
OP1: (-12.813,18.884,-10.771)
OP2: (-12.810,21.337,-10.038)
C3': (-17.965,19.903,-10.264)
C1': (-18.200,20.282,-8.010)
C5': (-15.649,18.764,-10.006)
O4': (-17.129,19.363,-8.161)
C8: (-16.428,22.100,-8.223)
O2': (-19.934,18.987,-9.104)
C6: (-18.010,25.097,-7.349)
C5: (-17.513,23.822,-7.672)
C4: (-18.406,22.768,-7.583)
P: (-13.271,19.941,-9.839)
C4': (-17.091,18.888,-9.534)
C2': (-19.075,20.103,-9.241)
C2: (-20.061,24.084,-6.939)
N1: (-19.309,25.194,-6.979)
N3: (-19.702,22.830,-7.220)
N6: (-17.252,26.197,-7.397)
N7: (-16.265,23.392,-8.077)
N9: (-17.690,21.651,-7.936)
O5': (-14.878,19.956,-9.774)
O3': (-18.458,19.444,-11.509)
OP2: (-12.810,21.337,-10.038)
C3': (-17.965,19.903,-10.264)
C1': (-18.200,20.282,-8.010)
C5': (-15.649,18.764,-10.006)
O4': (-17.129,19.363,-8.161)
C8: (-16.428,22.100,-8.223)
O2': (-19.934,18.987,-9.104)
C6: (-18.010,25.097,-7.349)
C5: (-17.513,23.822,-7.672)
C4: (-18.406,22.768,-7.583)
P: (-13.271,19.941,-9.839)
C4': (-17.091,18.888,-9.534)
C2': (-19.075,20.103,-9.241)
C2: (-20.061,24.084,-6.939)
N1: (-19.309,25.194,-6.979)
N3: (-19.702,22.830,-7.220)
N6: (-17.252,26.197,-7.397)
N7: (-16.265,23.392,-8.077)
N9: (-17.690,21.651,-7.936)
O5': (-14.878,19.956,-9.774)
O3': (-18.458,19.444,-11.509)
Image (generated by PyMOL):