ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:0617:0618

Extra

PDB:
ATOM 1 P A A 617 39.053 112.688 95.588 1.00 39.09 P
ATOM 2 OP1 A A 617 38.734 111.551 96.471 1.00 37.25 O
ATOM 3 OP2 A A 617 38.408 112.774 94.261 1.00 38.73 O
ATOM 4 O5' A A 617 38.767 114.030 96.399 1.00 35.96 O
ATOM 5 C5' A A 617 38.269 115.209 95.745 1.00 36.01 C
ATOM 6 C4' A A 617 38.813 116.452 96.416 1.00 37.49 C
ATOM 7 O4' A A 617 38.458 116.420 97.822 1.00 37.20 O
ATOM 8 C3' A A 617 40.329 116.613 96.409 1.00 38.22 C
ATOM 9 O3' A A 617 40.776 117.275 95.234 1.00 37.42 O
ATOM 10 C2' A A 617 40.567 117.504 97.615 1.00 37.86 C
ATOM 11 O2' A A 617 40.307 118.855 97.303 1.00 37.39 O
ATOM 12 C1' A A 617 39.509 116.986 98.592 1.00 38.24 C
ATOM 13 N9 A A 617 40.001 115.968 99.527 1.00 39.21 N
ATOM 14 C8 A A 617 39.561 114.671 99.657 1.00 40.35 C
ATOM 15 N7 A A 617 40.183 113.992 100.584 1.00 37.88 N
ATOM 16 C5 A A 617 41.094 114.895 101.105 1.00 39.19 C
ATOM 17 C6 A A 617 42.059 114.780 102.117 1.00 39.80 C
ATOM 18 N6 A A 617 42.269 113.661 102.815 1.00 40.07 N
ATOM 19 N1 A A 617 42.811 115.862 102.388 1.00 37.97 N
ATOM 20 C2 A A 617 42.596 116.981 101.688 1.00 37.53 C
ATOM 21 N3 A A 617 41.723 117.214 100.717 1.00 35.95 N
ATOM 22 C4 A A 617 40.995 116.117 100.465 1.00 38.19 C
ATOM 23 P A A 618 42.086 116.760 94.465 1.00 38.01 P
ATOM 24 OP1 A A 618 42.152 117.579 93.243 1.00 38.42 O
ATOM 25 OP2 A A 618 42.037 115.282 94.351 1.00 41.29 O
ATOM 26 O5' A A 618 43.324 117.086 95.422 1.00 39.05 O
TER

ATOM 1 O3' A B 617 40.776 117.275 95.234 1.00 37.42 O
ATOM 2 P A B 618 42.086 116.760 94.465 1.00 38.01 P
ATOM 3 OP1 A B 618 42.152 117.579 93.243 1.00 38.42 O
ATOM 4 OP2 A B 618 42.037 115.282 94.351 1.00 41.29 O
ATOM 5 O5' A B 618 43.324 117.086 95.422 1.00 39.05 O
ATOM 6 C5' A B 618 43.560 118.400 95.932 1.00 36.62 C
ATOM 7 C4' A B 618 44.323 118.347 97.254 1.00 38.88 C
ATOM 8 O4' A B 618 43.671 117.420 98.171 1.00 39.32 O
ATOM 9 C3' A B 618 45.812 117.987 97.261 1.00 36.42 C
ATOM 10 O3' A B 618 46.490 118.811 98.211 1.00 36.13 O
ATOM 11 C2' A B 618 45.818 116.543 97.765 1.00 38.27 C
ATOM 12 O2' A B 618 46.977 116.203 98.507 1.00 35.85 O
ATOM 13 C1' A B 618 44.624 116.527 98.717 1.00 38.52 C
ATOM 14 N9 A B 618 44.012 115.198 98.811 1.00 37.74 N
ATOM 15 C8 A B 618 43.051 114.678 97.982 1.00 38.75 C
ATOM 16 N7 A B 618 42.696 113.456 98.283 1.00 37.58 N
ATOM 17 C5 A B 618 43.467 113.146 99.386 1.00 36.17 C
ATOM 18 C6 A B 618 43.560 111.993 100.163 1.00 36.71 C
ATOM 19 N6 A B 618 42.839 110.899 99.929 1.00 34.65 N
ATOM 20 N1 A B 618 44.434 111.994 101.197 1.00 38.02 N
ATOM 21 C2 A B 618 45.161 113.096 101.415 1.00 37.80 C
ATOM 22 N3 A B 618 45.162 114.249 100.748 1.00 38.42 N
ATOM 23 C4 A B 618 44.283 114.210 99.730 1.00 37.79 C
ATOM 24 P A B 619 46.519 120.414 98.010 1.00 38.00 P
ATOM 25 OP1 A B 619 45.378 120.960 98.778 1.00 39.17 O
ATOM 26 OP2 A B 619 46.638 120.737 96.565 1.00 36.60 O
ATOM 27 O5' A B 619 47.859 120.878 98.741 1.00 37.55 O
TER

Atoms:
OP1: (38.734,111.551,96.471)
OP2: (38.408,112.774,94.261)
C3': (40.329,116.613,96.409)
C1': (39.509,116.986,98.592)
C5': (38.269,115.209,95.745)
O4': (38.458,116.420,97.822)
C8: (39.561,114.671,99.657)
O2': (40.307,118.855,97.303)
C6: (42.059,114.780,102.117)
C5: (41.094,114.895,101.105)
C4: (40.995,116.117,100.465)
P: (39.053,112.688,95.588)
C4': (38.813,116.452,96.416)
C2': (40.567,117.504,97.615)
C2: (42.596,116.981,101.688)
N1: (42.811,115.862,102.388)
N3: (41.723,117.214,100.717)
N6: (42.269,113.661,102.815)
N7: (40.183,113.992,100.584)
N9: (40.001,115.968,99.527)
O5': (38.767,114.030,96.399)
O3': (40.776,117.275,95.234)
OP1: (42.152,117.579,93.243)
OP2: (42.037,115.282,94.351)
C3': (45.812,117.987,97.261)
C1': (44.624,116.527,98.717)
C5': (43.560,118.400,95.932)
O4': (43.671,117.420,98.171)
C8: (43.051,114.678,97.982)
O2': (46.977,116.203,98.507)
C6: (43.560,111.993,100.163)
C5: (43.467,113.146,99.386)
C4: (44.283,114.210,99.730)
P: (42.086,116.760,94.465)
C4': (44.323,118.347,97.254)
C2': (45.818,116.543,97.765)
C2: (45.161,113.096,101.415)
N1: (44.434,111.994,101.197)
N3: (45.162,114.249,100.748)
N6: (42.839,110.899,99.929)
N7: (42.696,113.456,98.283)
N9: (44.012,115.198,98.811)
O5': (43.324,117.086,95.422)
O3': (46.490,118.811,98.211)
Image (generated by PyMOL):
PyMOL image
show in jmol