Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01237:01239
Extra
PDB:
ATOM 1 O3' C A1236 10.260 86.842 58.737 1.00 50.48 O
ATOM 2 P A A1237 10.269 86.705 60.333 1.00 50.69 P
ATOM 3 OP1 A A1237 11.443 85.879 60.682 1.00 48.69 O
ATOM 4 OP2 A A1237 8.917 86.285 60.784 1.00 52.45 O
ATOM 5 O5' A A1237 10.511 88.193 60.841 1.00 54.07 O
ATOM 6 C5' A A1237 11.771 88.859 60.627 1.00 58.21 C
ATOM 7 C4' A A1237 11.657 90.312 61.012 1.00 61.57 C
ATOM 8 O4' A A1237 10.738 90.978 60.110 1.00 61.08 O
ATOM 9 C3' A A1237 11.073 90.560 62.391 1.00 65.12 C
ATOM 10 O3' A A1237 12.070 90.454 63.392 1.00 71.44 O
ATOM 11 C2' A A1237 10.516 91.972 62.264 1.00 63.36 C
ATOM 12 O2' A A1237 11.499 92.975 62.416 1.00 63.90 O
ATOM 13 C1' A A1237 10.004 91.961 60.820 1.00 61.75 C
ATOM 14 N9 A A1237 8.586 91.629 60.720 1.00 61.06 N
ATOM 15 C8 A A1237 8.005 90.388 60.786 1.00 61.04 C
ATOM 16 N7 A A1237 6.701 90.411 60.686 1.00 60.42 N
ATOM 17 C5 A A1237 6.402 91.755 60.539 1.00 61.40 C
ATOM 18 C6 A A1237 5.185 92.441 60.393 1.00 62.92 C
ATOM 19 N6 A A1237 3.991 91.839 60.384 1.00 62.56 N
ATOM 20 N1 A A1237 5.234 93.785 60.262 1.00 63.67 N
ATOM 21 C2 A A1237 6.431 94.386 60.285 1.00 63.04 C
ATOM 22 N3 A A1237 7.642 93.851 60.425 1.00 61.89 N
ATOM 23 C4 A A1237 7.555 92.517 60.548 1.00 61.17 C
ATOM 24 P U A1238 11.733 89.727 64.786 1.00 77.02 P
ATOM 25 OP1 U A1238 11.924 88.269 64.574 1.00 74.63 O
ATOM 26 OP2 U A1238 10.423 90.233 65.285 1.00 75.65 O
ATOM 27 O5' U A1238 12.897 90.244 65.749 1.00 82.04 O
TER
ATOM 1 O3' U B1238 12.336 94.599 65.925 1.00 94.63 O
ATOM 2 P A B1239 10.728 94.686 65.914 1.00 94.73 P
ATOM 3 OP1 A B1239 10.347 95.683 66.948 1.00 95.15 O
ATOM 4 OP2 A B1239 10.176 93.306 65.992 1.00 95.35 O
ATOM 5 O5' A B1239 10.362 95.295 64.487 1.00 91.74 O
ATOM 6 C5' A B1239 10.270 96.720 64.287 1.00 88.63 C
ATOM 7 C4' A B1239 8.823 97.134 64.123 1.00 86.38 C
ATOM 8 O4' A B1239 8.225 96.340 63.063 1.00 85.91 O
ATOM 9 C3' A B1239 7.915 96.893 65.320 1.00 85.21 C
ATOM 10 O3' A B1239 7.996 97.951 66.272 1.00 84.75 O
ATOM 11 C2' A B1239 6.539 96.803 64.673 1.00 84.73 C
ATOM 12 O2' A B1239 5.977 98.062 64.354 1.00 84.13 O
ATOM 13 C1' A B1239 6.869 96.052 63.382 1.00 83.95 C
ATOM 14 N9 A B1239 6.727 94.601 63.526 1.00 81.16 N
ATOM 15 C8 A B1239 7.718 93.661 63.684 1.00 80.19 C
ATOM 16 N7 A B1239 7.272 92.435 63.800 1.00 78.74 N
ATOM 17 C5 A B1239 5.895 92.574 63.711 1.00 78.52 C
ATOM 18 C6 A B1239 4.852 91.641 63.764 1.00 77.94 C
ATOM 19 N6 A B1239 5.041 90.331 63.927 1.00 77.34 N
ATOM 20 N1 A B1239 3.590 92.105 63.642 1.00 78.32 N
ATOM 21 C2 A B1239 3.403 93.422 63.481 1.00 78.82 C
ATOM 22 N3 A B1239 4.303 94.398 63.417 1.00 78.88 N
ATOM 23 C4 A B1239 5.545 93.901 63.540 1.00 79.33 C
ATOM 24 P C B1240 7.379 97.751 67.746 1.00 84.65 P
ATOM 25 OP1 C B1240 7.448 99.061 68.443 1.00 84.66 O
ATOM 26 OP2 C B1240 7.984 96.549 68.378 1.00 84.29 O
ATOM 27 O5' C B1240 5.843 97.439 67.486 1.00 82.06 O
TER
ATOM 2 P A A1237 10.269 86.705 60.333 1.00 50.69 P
ATOM 3 OP1 A A1237 11.443 85.879 60.682 1.00 48.69 O
ATOM 4 OP2 A A1237 8.917 86.285 60.784 1.00 52.45 O
ATOM 5 O5' A A1237 10.511 88.193 60.841 1.00 54.07 O
ATOM 6 C5' A A1237 11.771 88.859 60.627 1.00 58.21 C
ATOM 7 C4' A A1237 11.657 90.312 61.012 1.00 61.57 C
ATOM 8 O4' A A1237 10.738 90.978 60.110 1.00 61.08 O
ATOM 9 C3' A A1237 11.073 90.560 62.391 1.00 65.12 C
ATOM 10 O3' A A1237 12.070 90.454 63.392 1.00 71.44 O
ATOM 11 C2' A A1237 10.516 91.972 62.264 1.00 63.36 C
ATOM 12 O2' A A1237 11.499 92.975 62.416 1.00 63.90 O
ATOM 13 C1' A A1237 10.004 91.961 60.820 1.00 61.75 C
ATOM 14 N9 A A1237 8.586 91.629 60.720 1.00 61.06 N
ATOM 15 C8 A A1237 8.005 90.388 60.786 1.00 61.04 C
ATOM 16 N7 A A1237 6.701 90.411 60.686 1.00 60.42 N
ATOM 17 C5 A A1237 6.402 91.755 60.539 1.00 61.40 C
ATOM 18 C6 A A1237 5.185 92.441 60.393 1.00 62.92 C
ATOM 19 N6 A A1237 3.991 91.839 60.384 1.00 62.56 N
ATOM 20 N1 A A1237 5.234 93.785 60.262 1.00 63.67 N
ATOM 21 C2 A A1237 6.431 94.386 60.285 1.00 63.04 C
ATOM 22 N3 A A1237 7.642 93.851 60.425 1.00 61.89 N
ATOM 23 C4 A A1237 7.555 92.517 60.548 1.00 61.17 C
ATOM 24 P U A1238 11.733 89.727 64.786 1.00 77.02 P
ATOM 25 OP1 U A1238 11.924 88.269 64.574 1.00 74.63 O
ATOM 26 OP2 U A1238 10.423 90.233 65.285 1.00 75.65 O
ATOM 27 O5' U A1238 12.897 90.244 65.749 1.00 82.04 O
TER
ATOM 1 O3' U B1238 12.336 94.599 65.925 1.00 94.63 O
ATOM 2 P A B1239 10.728 94.686 65.914 1.00 94.73 P
ATOM 3 OP1 A B1239 10.347 95.683 66.948 1.00 95.15 O
ATOM 4 OP2 A B1239 10.176 93.306 65.992 1.00 95.35 O
ATOM 5 O5' A B1239 10.362 95.295 64.487 1.00 91.74 O
ATOM 6 C5' A B1239 10.270 96.720 64.287 1.00 88.63 C
ATOM 7 C4' A B1239 8.823 97.134 64.123 1.00 86.38 C
ATOM 8 O4' A B1239 8.225 96.340 63.063 1.00 85.91 O
ATOM 9 C3' A B1239 7.915 96.893 65.320 1.00 85.21 C
ATOM 10 O3' A B1239 7.996 97.951 66.272 1.00 84.75 O
ATOM 11 C2' A B1239 6.539 96.803 64.673 1.00 84.73 C
ATOM 12 O2' A B1239 5.977 98.062 64.354 1.00 84.13 O
ATOM 13 C1' A B1239 6.869 96.052 63.382 1.00 83.95 C
ATOM 14 N9 A B1239 6.727 94.601 63.526 1.00 81.16 N
ATOM 15 C8 A B1239 7.718 93.661 63.684 1.00 80.19 C
ATOM 16 N7 A B1239 7.272 92.435 63.800 1.00 78.74 N
ATOM 17 C5 A B1239 5.895 92.574 63.711 1.00 78.52 C
ATOM 18 C6 A B1239 4.852 91.641 63.764 1.00 77.94 C
ATOM 19 N6 A B1239 5.041 90.331 63.927 1.00 77.34 N
ATOM 20 N1 A B1239 3.590 92.105 63.642 1.00 78.32 N
ATOM 21 C2 A B1239 3.403 93.422 63.481 1.00 78.82 C
ATOM 22 N3 A B1239 4.303 94.398 63.417 1.00 78.88 N
ATOM 23 C4 A B1239 5.545 93.901 63.540 1.00 79.33 C
ATOM 24 P C B1240 7.379 97.751 67.746 1.00 84.65 P
ATOM 25 OP1 C B1240 7.448 99.061 68.443 1.00 84.66 O
ATOM 26 OP2 C B1240 7.984 96.549 68.378 1.00 84.29 O
ATOM 27 O5' C B1240 5.843 97.439 67.486 1.00 82.06 O
TER
Atoms:
OP1: (11.443,85.879,60.682)
OP2: (8.917,86.285,60.784)
C3': (11.073,90.560,62.391)
C1': (10.004,91.961,60.820)
C5': (11.771,88.859,60.627)
O4': (10.738,90.978,60.110)
C8: (8.005,90.388,60.786)
O2': (11.499,92.975,62.416)
C6: (5.185,92.441,60.393)
C5: (6.402,91.755,60.539)
C4: (7.555,92.517,60.548)
P: (10.269,86.705,60.333)
C4': (11.657,90.312,61.012)
C2': (10.516,91.972,62.264)
C2: (6.431,94.386,60.285)
N1: (5.234,93.785,60.262)
N3: (7.642,93.851,60.425)
N6: (3.991,91.839,60.384)
N7: (6.701,90.411,60.686)
N9: (8.586,91.629,60.720)
O5': (10.511,88.193,60.841)
O3': (12.070,90.454,63.392)
OP2: (8.917,86.285,60.784)
C3': (11.073,90.560,62.391)
C1': (10.004,91.961,60.820)
C5': (11.771,88.859,60.627)
O4': (10.738,90.978,60.110)
C8: (8.005,90.388,60.786)
O2': (11.499,92.975,62.416)
C6: (5.185,92.441,60.393)
C5: (6.402,91.755,60.539)
C4: (7.555,92.517,60.548)
P: (10.269,86.705,60.333)
C4': (11.657,90.312,61.012)
C2': (10.516,91.972,62.264)
C2: (6.431,94.386,60.285)
N1: (5.234,93.785,60.262)
N3: (7.642,93.851,60.425)
N6: (3.991,91.839,60.384)
N7: (6.701,90.411,60.686)
N9: (8.586,91.629,60.720)
O5': (10.511,88.193,60.841)
O3': (12.070,90.454,63.392)
OP1: (10.347,95.683,66.948)
OP2: (10.176,93.306,65.992)
C3': (7.915,96.893,65.320)
C1': (6.869,96.052,63.382)
C5': (10.270,96.720,64.287)
O4': (8.225,96.340,63.063)
C8: (7.718,93.661,63.684)
O2': (5.977,98.062,64.354)
C6: (4.852,91.641,63.764)
C5: (5.895,92.574,63.711)
C4: (5.545,93.901,63.540)
P: (10.728,94.686,65.914)
C4': (8.823,97.134,64.123)
C2': (6.539,96.803,64.673)
C2: (3.403,93.422,63.481)
N1: (3.590,92.105,63.642)
N3: (4.303,94.398,63.417)
N6: (5.041,90.331,63.927)
N7: (7.272,92.435,63.800)
N9: (6.727,94.601,63.526)
O5': (10.362,95.295,64.487)
O3': (7.996,97.951,66.272)
OP2: (10.176,93.306,65.992)
C3': (7.915,96.893,65.320)
C1': (6.869,96.052,63.382)
C5': (10.270,96.720,64.287)
O4': (8.225,96.340,63.063)
C8: (7.718,93.661,63.684)
O2': (5.977,98.062,64.354)
C6: (4.852,91.641,63.764)
C5: (5.895,92.574,63.711)
C4: (5.545,93.901,63.540)
P: (10.728,94.686,65.914)
C4': (8.823,97.134,64.123)
C2': (6.539,96.803,64.673)
C2: (3.403,93.422,63.481)
N1: (3.590,92.105,63.642)
N3: (4.303,94.398,63.417)
N6: (5.041,90.331,63.927)
N7: (7.272,92.435,63.800)
N9: (6.727,94.601,63.526)
O5': (10.362,95.295,64.487)
O3': (7.996,97.951,66.272)
Image (generated by PyMOL):