ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:F4:F5

Extra

PDB:
ATOM 1 O3' A A 3 20.268 -3.409 6.067 1.00 53.15 O
ATOM 2 P A A 4 20.261 -2.905 7.577 1.00 52.70 P
ATOM 3 OP1 A A 4 21.083 -1.665 7.601 1.00 53.51 O
ATOM 4 OP2 A A 4 20.545 -4.080 8.434 1.00 51.54 O
ATOM 5 O5' A A 4 18.744 -2.530 7.847 1.00 52.70 O
ATOM 6 C5' A A 4 17.800 -3.550 7.735 1.00 52.59 C
ATOM 7 C4' A A 4 16.480 -2.972 7.310 1.00 53.57 C
ATOM 8 O4' A A 4 16.298 -3.186 5.898 1.00 53.21 O
ATOM 9 C3' A A 4 15.301 -3.634 7.992 1.00 54.93 C
ATOM 10 O3' A A 4 15.026 -2.898 9.173 1.00 56.57 O
ATOM 11 C2' A A 4 14.206 -3.453 6.955 1.00 55.61 C
ATOM 12 O2' A A 4 13.641 -2.161 7.036 1.00 58.89 O
ATOM 13 C1' A A 4 14.972 -3.611 5.644 1.00 54.82 C
ATOM 14 N9 A A 4 14.979 -4.988 5.119 1.00 53.82 N
ATOM 15 C8 A A 4 15.985 -5.907 5.232 1.00 53.04 C
ATOM 16 N7 A A 4 15.717 -7.062 4.673 1.00 52.09 N
ATOM 17 C5 A A 4 14.461 -6.889 4.141 1.00 52.70 C
ATOM 18 C6 A A 4 13.613 -7.753 3.420 1.00 53.85 C
ATOM 19 N6 A A 4 13.946 -9.004 3.099 1.00 54.37 N
ATOM 20 N1 A A 4 12.403 -7.287 3.043 1.00 55.16 N
ATOM 21 C2 A A 4 12.080 -6.031 3.370 1.00 55.59 C
ATOM 22 N3 A A 4 12.795 -5.131 4.044 1.00 55.11 N
ATOM 23 C4 A A 4 13.986 -5.623 4.407 1.00 53.49 C
ATOM 24 P A A 5 14.356 -3.552 10.457 1.00 56.48 P
ATOM 25 OP1 A A 5 14.172 -2.427 11.414 1.00 60.85 O
ATOM 26 OP2 A A 5 15.133 -4.738 10.872 1.00 54.64 O
ATOM 27 O5' A A 5 12.936 -4.057 9.914 1.00 56.37 O
TER

ATOM 1 O3' A B 4 15.026 -2.898 9.173 1.00 56.57 O
ATOM 2 P A B 5 14.356 -3.552 10.457 1.00 56.48 P
ATOM 3 OP1 A B 5 14.172 -2.427 11.414 1.00 60.85 O
ATOM 4 OP2 A B 5 15.133 -4.738 10.872 1.00 54.64 O
ATOM 5 O5' A B 5 12.936 -4.057 9.914 1.00 56.37 O
ATOM 6 C5' A B 5 11.973 -3.077 9.561 1.00 57.35 C
ATOM 7 C4' A B 5 10.796 -3.630 8.778 1.00 57.32 C
ATOM 8 O4' A B 5 11.168 -4.099 7.457 1.00 55.61 O
ATOM 9 C3' A B 5 10.059 -4.803 9.404 1.00 56.66 C
ATOM 10 O3' A B 5 9.249 -4.289 10.484 1.00 60.92 O
ATOM 11 C2' A B 5 9.238 -5.257 8.201 1.00 55.55 C
ATOM 12 O2' A B 5 8.055 -4.500 8.027 1.00 56.60 O
ATOM 13 C1' A B 5 10.196 -5.035 7.027 1.00 54.49 C
ATOM 14 N9 A B 5 10.858 -6.277 6.646 1.00 51.03 N
ATOM 15 C8 A B 5 12.108 -6.674 7.016 1.00 50.32 C
ATOM 16 N7 A B 5 12.455 -7.857 6.559 1.00 50.21 N
ATOM 17 C5 A B 5 11.350 -8.266 5.831 1.00 49.72 C
ATOM 18 C6 A B 5 11.079 -9.441 5.082 1.00 48.57 C
ATOM 19 N6 A B 5 11.957 -10.442 4.952 1.00 47.49 N
ATOM 20 N1 A B 5 9.870 -9.546 4.473 1.00 49.16 N
ATOM 21 C2 A B 5 9.005 -8.538 4.614 1.00 50.75 C
ATOM 22 N3 A B 5 9.152 -7.388 5.294 1.00 52.49 N
ATOM 23 C4 A B 5 10.355 -7.304 5.880 1.00 50.72 C
ATOM 24 P A B 6 8.191 -5.180 11.290 1.00 62.36 P
ATOM 25 OP1 A B 6 7.359 -4.234 12.064 1.00 64.69 O
ATOM 26 OP2 A B 6 8.934 -6.269 11.964 1.00 60.32 O
ATOM 27 O5' A B 6 7.286 -5.834 10.158 1.00 61.27 O
TER

Atoms:
OP1: (21.083,-1.665,7.601)
OP2: (20.545,-4.080,8.434)
C3': (15.301,-3.634,7.992)
C1': (14.972,-3.611,5.644)
C5': (17.800,-3.550,7.735)
O4': (16.298,-3.186,5.898)
C8: (15.985,-5.907,5.232)
O2': (13.641,-2.161,7.036)
C6: (13.613,-7.753,3.420)
C5: (14.461,-6.889,4.141)
C4: (13.986,-5.623,4.407)
P: (20.261,-2.905,7.577)
C4': (16.480,-2.972,7.310)
C2': (14.206,-3.453,6.955)
C2: (12.080,-6.031,3.370)
N1: (12.403,-7.287,3.043)
N3: (12.795,-5.131,4.044)
N6: (13.946,-9.004,3.099)
N7: (15.717,-7.062,4.673)
N9: (14.979,-4.988,5.119)
O5': (18.744,-2.530,7.847)
O3': (15.026,-2.898,9.173)
OP1: (14.172,-2.427,11.414)
OP2: (15.133,-4.738,10.872)
C3': (10.059,-4.803,9.404)
C1': (10.196,-5.035,7.027)
C5': (11.973,-3.077,9.561)
O4': (11.168,-4.099,7.457)
C8: (12.108,-6.674,7.016)
O2': (8.055,-4.500,8.027)
C6: (11.079,-9.441,5.082)
C5: (11.350,-8.266,5.831)
C4: (10.355,-7.304,5.880)
P: (14.356,-3.552,10.457)
C4': (10.796,-3.630,8.778)
C2': (9.238,-5.257,8.201)
C2: (9.005,-8.538,4.614)
N1: (9.870,-9.546,4.473)
N3: (9.152,-7.388,5.294)
N6: (11.957,-10.442,4.952)
N7: (12.455,-7.857,6.559)
N9: (10.858,-6.277,6.646)
O5': (12.936,-4.057,9.914)
O3': (9.249,-4.289,10.484)
Image (generated by PyMOL):
PyMOL image
show in jmol