ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A890:A891

Extra

PDB:
ATOM 1 O3' G A 889 172.799 111.900 -22.437 1.00 24.33 O
ATOM 2 P A A 890 174.056 112.862 -22.635 1.00 23.79 P
ATOM 3 OP1 A A 890 174.165 113.222 -24.089 1.00 22.46 O
ATOM 4 OP2 A A 890 175.185 112.222 -21.909 1.00 23.72 O
ATOM 5 O5' A A 890 173.636 114.163 -21.854 1.00 24.60 O
ATOM 6 C5' A A 890 172.651 115.052 -22.398 1.00 24.86 C
ATOM 7 C4' A A 890 172.336 116.142 -21.407 1.00 25.56 C
ATOM 8 O4' A A 890 171.869 115.553 -20.164 1.00 25.48 O
ATOM 9 C3' A A 890 173.495 117.028 -20.984 1.00 25.21 C
ATOM 10 O3' A A 890 173.674 118.074 -21.918 1.00 25.54 O
ATOM 11 C2' A A 890 173.014 117.562 -19.642 1.00 24.50 C
ATOM 12 O2' A A 890 172.075 118.605 -19.804 1.00 24.86 O
ATOM 13 C1' A A 890 172.264 116.362 -19.079 1.00 23.31 C
ATOM 14 N9 A A 890 173.080 115.561 -18.179 1.00 22.13 N
ATOM 15 C8 A A 890 173.856 114.480 -18.481 1.00 23.19 C
ATOM 16 N7 A A 890 174.481 113.975 -17.440 1.00 25.55 N
ATOM 17 C5 A A 890 174.083 114.782 -16.387 1.00 23.42 C
ATOM 18 C6 A A 890 174.394 114.772 -15.015 1.00 23.50 C
ATOM 19 N6 A A 890 175.201 113.885 -14.450 1.00 23.30 N
ATOM 20 N1 A A 890 173.836 115.715 -14.236 1.00 23.42 N
ATOM 21 C2 A A 890 173.015 116.598 -14.803 1.00 25.45 C
ATOM 22 N3 A A 890 172.638 116.709 -16.079 1.00 25.40 N
ATOM 23 C4 A A 890 173.219 115.760 -16.827 1.00 23.21 C
ATOM 24 P A A 891 175.046 118.889 -21.938 1.00 25.10 P
ATOM 25 OP1 A A 891 174.907 119.868 -23.060 1.00 22.72 O
ATOM 26 OP2 A A 891 176.138 117.901 -21.916 1.00 25.51 O
ATOM 27 O5' A A 891 175.097 119.650 -20.521 1.00 25.88 O
TER

ATOM 1 O3' A B 890 173.674 118.074 -21.918 1.00 25.54 O
ATOM 2 P A B 891 175.046 118.889 -21.938 1.00 25.10 P
ATOM 3 OP1 A B 891 174.907 119.868 -23.060 1.00 22.72 O
ATOM 4 OP2 A B 891 176.138 117.901 -21.916 1.00 25.51 O
ATOM 5 O5' A B 891 175.097 119.650 -20.521 1.00 25.88 O
ATOM 6 C5' A B 891 174.468 120.937 -20.321 1.00 25.55 C
ATOM 7 C4' A B 891 174.386 121.251 -18.842 1.00 25.71 C
ATOM 8 O4' A B 891 173.935 120.054 -18.155 1.00 25.66 O
ATOM 9 C3' A B 891 175.689 121.596 -18.137 1.00 26.65 C
ATOM 10 O3' A B 891 176.008 122.957 -18.246 1.00 28.28 O
ATOM 11 C2' A B 891 175.422 121.186 -16.690 1.00 26.22 C
ATOM 12 O2' A B 891 174.693 122.125 -15.917 1.00 27.06 O
ATOM 13 C1' A B 891 174.568 119.946 -16.891 1.00 25.04 C
ATOM 14 N9 A B 891 175.417 118.766 -16.910 1.00 24.57 N
ATOM 15 C8 A B 891 175.861 118.050 -17.991 1.00 24.92 C
ATOM 16 N7 A B 891 176.641 117.048 -17.669 1.00 25.66 N
ATOM 17 C5 A B 891 176.711 117.109 -16.288 1.00 23.93 C
ATOM 18 C6 A B 891 177.373 116.323 -15.349 1.00 25.57 C
ATOM 19 N6 A B 891 178.132 115.280 -15.670 1.00 25.60 N
ATOM 20 N1 A B 891 177.228 116.643 -14.044 1.00 27.39 N
ATOM 21 C2 A B 891 176.462 117.690 -13.726 1.00 26.50 C
ATOM 22 N3 A B 891 175.788 118.508 -14.525 1.00 25.66 N
ATOM 23 C4 A B 891 175.956 118.157 -15.808 1.00 25.23 C
ATOM 24 P U B 892 177.518 123.434 -17.988 1.00 30.21 P
ATOM 25 OP1 U B 892 177.522 124.906 -18.226 1.00 30.02 O
ATOM 26 OP2 U B 892 178.398 122.544 -18.779 1.00 32.32 O
ATOM 27 O5' U B 892 177.773 123.169 -16.442 1.00 27.32 O
TER

Atoms:
OP1: (174.165,113.222,-24.089)
OP2: (175.185,112.222,-21.909)
C3': (173.495,117.028,-20.984)
C1': (172.264,116.362,-19.079)
C5': (172.651,115.052,-22.398)
O4': (171.869,115.553,-20.164)
C8: (173.856,114.480,-18.481)
O2': (172.075,118.605,-19.804)
C6: (174.394,114.772,-15.015)
C5: (174.083,114.782,-16.387)
C4: (173.219,115.760,-16.827)
P: (174.056,112.862,-22.635)
C4': (172.336,116.142,-21.407)
C2': (173.014,117.562,-19.642)
C2: (173.015,116.598,-14.803)
N1: (173.836,115.715,-14.236)
N3: (172.638,116.709,-16.079)
N6: (175.201,113.885,-14.450)
N7: (174.481,113.975,-17.440)
N9: (173.080,115.561,-18.179)
O5': (173.636,114.163,-21.854)
O3': (173.674,118.074,-21.918)
OP1: (174.907,119.868,-23.060)
OP2: (176.138,117.901,-21.916)
C3': (175.689,121.596,-18.137)
C1': (174.568,119.946,-16.891)
C5': (174.468,120.937,-20.321)
O4': (173.935,120.054,-18.155)
C8: (175.861,118.050,-17.991)
O2': (174.693,122.125,-15.917)
C6: (177.373,116.323,-15.349)
C5: (176.711,117.109,-16.288)
C4: (175.956,118.157,-15.808)
P: (175.046,118.889,-21.938)
C4': (174.386,121.251,-18.842)
C2': (175.422,121.186,-16.690)
C2: (176.462,117.690,-13.726)
N1: (177.228,116.643,-14.044)
N3: (175.788,118.508,-14.525)
N6: (178.132,115.280,-15.670)
N7: (176.641,117.048,-17.669)
N9: (175.417,118.766,-16.910)
O5': (175.097,119.650,-20.521)
O3': (176.008,122.957,-18.246)
Image (generated by PyMOL):
PyMOL image
show in jmol