ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A879:A880

Extra

PDB:
ATOM 1 O3' G A 878 -68.623 16.459 -23.465 1.00 10.47 O
ATOM 2 P A A 879 -69.979 17.258 -23.755 1.00 42.14 P
ATOM 3 OP1 A A 879 -69.917 17.683 -25.175 1.00 24.22 O
ATOM 4 OP2 A A 879 -70.185 18.266 -22.673 1.00 19.73 O
ATOM 5 O5' A A 879 -71.109 16.149 -23.611 1.00 45.07 O
ATOM 6 C5' A A 879 -72.036 15.884 -24.677 1.00 46.13 C
ATOM 7 C4' A A 879 -71.646 14.620 -25.407 1.00 46.08 C
ATOM 8 O4' A A 879 -71.393 13.547 -24.464 1.00 46.82 O
ATOM 9 C3' A A 879 -72.730 14.092 -26.325 1.00 46.51 C
ATOM 10 O3' A A 879 -72.683 14.741 -27.597 1.00 47.23 O
ATOM 11 C2' A A 879 -72.410 12.607 -26.394 1.00 46.92 C
ATOM 12 O2' A A 879 -71.404 12.320 -27.336 1.00 47.67 O
ATOM 13 C1' A A 879 -71.881 12.331 -24.984 1.00 46.97 C
ATOM 14 N9 A A 879 -72.940 11.847 -24.102 1.00 21.93 N
ATOM 15 C8 A A 879 -73.347 12.338 -22.889 1.00 21.19 C
ATOM 16 N7 A A 879 -74.360 11.688 -22.372 1.00 20.88 N
ATOM 17 C5 A A 879 -74.629 10.699 -23.304 1.00 20.24 C
ATOM 18 C6 A A 879 -75.587 9.684 -23.349 1.00 20.25 C
ATOM 19 N6 A A 879 -76.499 9.483 -22.411 1.00 19.94 N
ATOM 20 N1 A A 879 -75.585 8.867 -24.409 1.00 19.94 N
ATOM 21 C2 A A 879 -74.680 9.072 -25.360 1.00 19.94 C
ATOM 22 N3 A A 879 -73.732 9.994 -25.438 1.00 19.94 N
ATOM 23 C4 A A 879 -73.761 10.783 -24.364 1.00 19.95 C
ATOM 24 P A A 880 -74.017 15.421 -28.199 1.00 59.45 P
ATOM 25 OP1 A A 880 -73.591 16.315 -29.310 1.00 63.81 O
ATOM 26 OP2 A A 880 -74.839 15.971 -27.078 1.00 59.45 O
ATOM 27 O5' A A 880 -74.806 14.195 -28.841 1.00 29.07 O
TER

ATOM 1 O3' A B 879 -72.683 14.741 -27.597 1.00 47.23 O
ATOM 2 P A B 880 -74.017 15.421 -28.199 1.00 59.45 P
ATOM 3 OP1 A B 880 -73.591 16.315 -29.310 1.00 63.81 O
ATOM 4 OP2 A B 880 -74.839 15.971 -27.078 1.00 59.45 O
ATOM 5 O5' A B 880 -74.806 14.195 -28.841 1.00 29.07 O
ATOM 6 C5' A B 880 -74.168 13.331 -29.795 1.00 27.22 C
ATOM 7 C4' A B 880 -74.896 12.015 -29.869 1.00 27.90 C
ATOM 8 O4' A B 880 -74.801 11.332 -28.594 1.00 28.07 O
ATOM 9 C3' A B 880 -76.383 12.123 -30.141 1.00 29.14 C
ATOM 10 O3' A B 880 -76.622 12.235 -31.540 1.00 31.16 O
ATOM 11 C2' A B 880 -76.938 10.837 -29.535 1.00 28.71 C
ATOM 12 O2' A B 880 -76.879 9.734 -30.411 1.00 28.33 O
ATOM 13 C1' A B 880 -75.986 10.597 -28.357 1.00 27.38 C
ATOM 14 N9 A B 880 -76.525 10.992 -27.056 1.00 12.34 N
ATOM 15 C8 A B 880 -76.097 12.007 -26.253 1.00 12.85 C
ATOM 16 N7 A B 880 -76.782 12.124 -25.144 1.00 11.19 N
ATOM 17 C5 A B 880 -77.727 11.118 -25.222 1.00 9.38 C
ATOM 18 C6 A B 880 -78.763 10.721 -24.354 1.00 9.86 C
ATOM 19 N6 A B 880 -79.023 11.306 -23.182 1.00 12.28 N
ATOM 20 N1 A B 880 -79.533 9.686 -24.733 1.00 8.55 N
ATOM 21 C2 A B 880 -79.262 9.089 -25.899 1.00 8.78 C
ATOM 22 N3 A B 880 -78.316 9.366 -26.795 1.00 10.77 N
ATOM 23 C4 A B 880 -77.577 10.408 -26.392 1.00 10.23 C
ATOM 24 P A B 881 -77.968 12.933 -32.065 1.00 53.83 P
ATOM 25 OP1 A B 881 -77.767 13.173 -33.513 1.00 51.47 O
ATOM 26 OP2 A B 881 -78.348 14.065 -31.178 1.00 48.00 O
ATOM 27 O5' A B 881 -79.067 11.804 -31.868 1.00 19.46 O
TER

Atoms:
OP1: (-69.917,17.683,-25.175)
OP2: (-70.185,18.266,-22.673)
C3': (-72.730,14.092,-26.325)
C1': (-71.881,12.331,-24.984)
C5': (-72.036,15.884,-24.677)
O4': (-71.393,13.547,-24.464)
C8: (-73.347,12.338,-22.889)
O2': (-71.404,12.320,-27.336)
C6: (-75.587,9.684,-23.349)
C5: (-74.629,10.699,-23.304)
C4: (-73.761,10.783,-24.364)
P: (-69.979,17.258,-23.755)
C4': (-71.646,14.620,-25.407)
C2': (-72.410,12.607,-26.394)
C2: (-74.680,9.072,-25.360)
N1: (-75.585,8.867,-24.409)
N3: (-73.732,9.994,-25.438)
N6: (-76.499,9.483,-22.411)
N7: (-74.360,11.688,-22.372)
N9: (-72.940,11.847,-24.102)
O5': (-71.109,16.149,-23.611)
O3': (-72.683,14.741,-27.597)
OP1: (-73.591,16.315,-29.310)
OP2: (-74.839,15.971,-27.078)
C3': (-76.383,12.123,-30.141)
C1': (-75.986,10.597,-28.357)
C5': (-74.168,13.331,-29.795)
O4': (-74.801,11.332,-28.594)
C8: (-76.097,12.007,-26.253)
O2': (-76.879,9.734,-30.411)
C6: (-78.763,10.721,-24.354)
C5: (-77.727,11.118,-25.222)
C4: (-77.577,10.408,-26.392)
P: (-74.017,15.421,-28.199)
C4': (-74.896,12.015,-29.869)
C2': (-76.938,10.837,-29.535)
C2: (-79.262,9.089,-25.899)
N1: (-79.533,9.686,-24.733)
N3: (-78.316,9.366,-26.795)
N6: (-79.023,11.306,-23.182)
N7: (-76.782,12.124,-25.144)
N9: (-76.525,10.992,-27.056)
O5': (-74.806,14.195,-28.841)
O3': (-76.622,12.235,-31.540)
Image (generated by PyMOL):
PyMOL image
show in jmol