Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A32:A172
Extra
PDB:
ATOM 1 O3' G A 31 58.629 130.326 24.282 1.00 49.68 O
ATOM 2 P C A 32 59.433 129.700 23.041 1.00 48.01 P
ATOM 3 OP1 C A 32 59.376 130.775 22.032 1.00 48.10 O
ATOM 4 OP2 C A 32 58.915 128.347 22.712 1.00 46.87 O
ATOM 5 O5' C A 32 60.946 129.567 23.541 1.00 47.83 O
ATOM 6 C5' C A 32 61.859 130.708 23.510 1.00 47.27 C
ATOM 7 C4' C A 32 61.634 131.589 24.717 1.00 45.78 C
ATOM 8 O4' C A 32 61.911 130.841 25.918 1.00 44.63 O
ATOM 9 C3' C A 32 62.513 132.817 24.859 1.00 46.40 C
ATOM 10 O3' C A 32 62.030 133.873 24.046 1.00 50.48 O
ATOM 11 C2' C A 32 62.366 133.128 26.342 1.00 44.94 C
ATOM 12 O2' C A 32 61.128 133.723 26.682 1.00 45.93 O
ATOM 13 C1' C A 32 62.370 131.719 26.928 1.00 44.12 C
ATOM 14 N1 C A 32 63.711 131.287 27.346 1.00 43.17 N
ATOM 15 C2 C A 32 64.236 131.765 28.551 1.00 43.46 C
ATOM 16 O2 C A 32 63.562 132.562 29.228 1.00 43.59 O
ATOM 17 N3 C A 32 65.465 131.351 28.938 1.00 43.35 N
ATOM 18 C4 C A 32 66.159 130.503 28.170 1.00 43.91 C
ATOM 19 N4 C A 32 67.356 130.091 28.599 1.00 44.53 N
ATOM 20 C5 C A 32 65.654 130.027 26.935 1.00 43.50 C
ATOM 21 C6 C A 32 64.438 130.435 26.568 1.00 42.18 C
ATOM 22 P U A 33 63.065 134.897 23.369 1.00 53.02 P
ATOM 23 OP1 U A 33 62.273 135.709 22.402 1.00 51.04 O
ATOM 24 OP2 U A 33 64.245 134.113 22.890 1.00 52.47 O
ATOM 25 O5' U A 33 63.486 135.826 24.587 1.00 51.19 O
TER
ATOM 1 O3' A B 171 71.068 127.093 25.962 1.00 47.31 O
ATOM 2 P G B 172 69.866 128.120 25.725 1.00 48.54 P
ATOM 3 OP1 G B 172 70.196 128.925 24.518 1.00 48.58 O
ATOM 4 OP2 G B 172 69.640 128.813 27.018 1.00 46.43 O
ATOM 5 O5' G B 172 68.597 127.189 25.432 1.00 48.93 O
ATOM 6 C5' G B 172 68.600 126.169 24.409 1.00 47.62 C
ATOM 7 C4' G B 172 67.364 125.301 24.541 1.00 47.87 C
ATOM 8 O4' G B 172 67.389 124.597 25.816 1.00 48.17 O
ATOM 9 C3' G B 172 66.027 126.038 24.546 1.00 47.88 C
ATOM 10 O3' G B 172 65.593 126.341 23.224 1.00 47.05 O
ATOM 11 C2' G B 172 65.109 125.068 25.296 1.00 48.58 C
ATOM 12 O2' G B 172 64.586 123.980 24.563 1.00 48.70 O
ATOM 13 C1' G B 172 66.067 124.499 26.336 1.00 48.80 C
ATOM 14 N9 G B 172 66.007 125.258 27.574 1.00 50.35 N
ATOM 15 C8 G B 172 66.728 126.382 27.892 1.00 50.74 C
ATOM 16 N7 G B 172 66.495 126.808 29.100 1.00 50.74 N
ATOM 17 C5 G B 172 65.562 125.909 29.607 1.00 50.21 C
ATOM 18 C6 G B 172 64.968 125.828 30.884 1.00 49.96 C
ATOM 19 O6 G B 172 65.189 126.525 31.876 1.00 50.66 O
ATOM 20 N1 G B 172 64.056 124.786 30.960 1.00 50.31 N
ATOM 21 C2 G B 172 63.773 123.912 29.948 1.00 51.31 C
ATOM 22 N2 G B 172 62.846 122.971 30.214 1.00 51.98 N
ATOM 23 N3 G B 172 64.351 123.954 28.761 1.00 51.28 N
ATOM 24 C4 G B 172 65.228 124.970 28.664 1.00 50.49 C
ATOM 25 P G B 173 64.601 127.579 22.952 1.00 47.48 P
ATOM 26 OP1 G B 173 64.736 127.832 21.498 1.00 48.13 O
ATOM 27 OP2 G B 173 64.820 128.694 23.905 1.00 46.70 O
ATOM 28 O5' G B 173 63.143 126.977 23.209 1.00 49.78 O
TER
ATOM 2 P C A 32 59.433 129.700 23.041 1.00 48.01 P
ATOM 3 OP1 C A 32 59.376 130.775 22.032 1.00 48.10 O
ATOM 4 OP2 C A 32 58.915 128.347 22.712 1.00 46.87 O
ATOM 5 O5' C A 32 60.946 129.567 23.541 1.00 47.83 O
ATOM 6 C5' C A 32 61.859 130.708 23.510 1.00 47.27 C
ATOM 7 C4' C A 32 61.634 131.589 24.717 1.00 45.78 C
ATOM 8 O4' C A 32 61.911 130.841 25.918 1.00 44.63 O
ATOM 9 C3' C A 32 62.513 132.817 24.859 1.00 46.40 C
ATOM 10 O3' C A 32 62.030 133.873 24.046 1.00 50.48 O
ATOM 11 C2' C A 32 62.366 133.128 26.342 1.00 44.94 C
ATOM 12 O2' C A 32 61.128 133.723 26.682 1.00 45.93 O
ATOM 13 C1' C A 32 62.370 131.719 26.928 1.00 44.12 C
ATOM 14 N1 C A 32 63.711 131.287 27.346 1.00 43.17 N
ATOM 15 C2 C A 32 64.236 131.765 28.551 1.00 43.46 C
ATOM 16 O2 C A 32 63.562 132.562 29.228 1.00 43.59 O
ATOM 17 N3 C A 32 65.465 131.351 28.938 1.00 43.35 N
ATOM 18 C4 C A 32 66.159 130.503 28.170 1.00 43.91 C
ATOM 19 N4 C A 32 67.356 130.091 28.599 1.00 44.53 N
ATOM 20 C5 C A 32 65.654 130.027 26.935 1.00 43.50 C
ATOM 21 C6 C A 32 64.438 130.435 26.568 1.00 42.18 C
ATOM 22 P U A 33 63.065 134.897 23.369 1.00 53.02 P
ATOM 23 OP1 U A 33 62.273 135.709 22.402 1.00 51.04 O
ATOM 24 OP2 U A 33 64.245 134.113 22.890 1.00 52.47 O
ATOM 25 O5' U A 33 63.486 135.826 24.587 1.00 51.19 O
TER
ATOM 1 O3' A B 171 71.068 127.093 25.962 1.00 47.31 O
ATOM 2 P G B 172 69.866 128.120 25.725 1.00 48.54 P
ATOM 3 OP1 G B 172 70.196 128.925 24.518 1.00 48.58 O
ATOM 4 OP2 G B 172 69.640 128.813 27.018 1.00 46.43 O
ATOM 5 O5' G B 172 68.597 127.189 25.432 1.00 48.93 O
ATOM 6 C5' G B 172 68.600 126.169 24.409 1.00 47.62 C
ATOM 7 C4' G B 172 67.364 125.301 24.541 1.00 47.87 C
ATOM 8 O4' G B 172 67.389 124.597 25.816 1.00 48.17 O
ATOM 9 C3' G B 172 66.027 126.038 24.546 1.00 47.88 C
ATOM 10 O3' G B 172 65.593 126.341 23.224 1.00 47.05 O
ATOM 11 C2' G B 172 65.109 125.068 25.296 1.00 48.58 C
ATOM 12 O2' G B 172 64.586 123.980 24.563 1.00 48.70 O
ATOM 13 C1' G B 172 66.067 124.499 26.336 1.00 48.80 C
ATOM 14 N9 G B 172 66.007 125.258 27.574 1.00 50.35 N
ATOM 15 C8 G B 172 66.728 126.382 27.892 1.00 50.74 C
ATOM 16 N7 G B 172 66.495 126.808 29.100 1.00 50.74 N
ATOM 17 C5 G B 172 65.562 125.909 29.607 1.00 50.21 C
ATOM 18 C6 G B 172 64.968 125.828 30.884 1.00 49.96 C
ATOM 19 O6 G B 172 65.189 126.525 31.876 1.00 50.66 O
ATOM 20 N1 G B 172 64.056 124.786 30.960 1.00 50.31 N
ATOM 21 C2 G B 172 63.773 123.912 29.948 1.00 51.31 C
ATOM 22 N2 G B 172 62.846 122.971 30.214 1.00 51.98 N
ATOM 23 N3 G B 172 64.351 123.954 28.761 1.00 51.28 N
ATOM 24 C4 G B 172 65.228 124.970 28.664 1.00 50.49 C
ATOM 25 P G B 173 64.601 127.579 22.952 1.00 47.48 P
ATOM 26 OP1 G B 173 64.736 127.832 21.498 1.00 48.13 O
ATOM 27 OP2 G B 173 64.820 128.694 23.905 1.00 46.70 O
ATOM 28 O5' G B 173 63.143 126.977 23.209 1.00 49.78 O
TER
Atoms:
C2: (64.236,131.765,28.551)
OP1: (59.376,130.775,22.032)
OP2: (58.915,128.347,22.712)
C4: (66.159,130.503,28.170)
O5': (60.946,129.567,23.541)
C3': (62.513,132.817,24.859)
C1': (62.370,131.719,26.928)
O4': (61.911,130.841,25.918)
C5': (61.859,130.708,23.510)
P: (59.433,129.700,23.041)
O2: (63.562,132.562,29.228)
C4': (61.634,131.589,24.717)
C2': (62.366,133.128,26.342)
O2': (61.128,133.723,26.682)
N1: (63.711,131.287,27.346)
N3: (65.465,131.351,28.938)
N4: (67.356,130.091,28.599)
C6: (64.438,130.435,26.568)
C5: (65.654,130.027,26.935)
O3': (62.030,133.873,24.046)
OP1: (59.376,130.775,22.032)
OP2: (58.915,128.347,22.712)
C4: (66.159,130.503,28.170)
O5': (60.946,129.567,23.541)
C3': (62.513,132.817,24.859)
C1': (62.370,131.719,26.928)
O4': (61.911,130.841,25.918)
C5': (61.859,130.708,23.510)
P: (59.433,129.700,23.041)
O2: (63.562,132.562,29.228)
C4': (61.634,131.589,24.717)
C2': (62.366,133.128,26.342)
O2': (61.128,133.723,26.682)
N1: (63.711,131.287,27.346)
N3: (65.465,131.351,28.938)
N4: (67.356,130.091,28.599)
C6: (64.438,130.435,26.568)
C5: (65.654,130.027,26.935)
O3': (62.030,133.873,24.046)
OP1: (70.196,128.925,24.518)
OP2: (69.640,128.813,27.018)
C3': (66.027,126.038,24.546)
C1': (66.067,124.499,26.336)
C5': (68.600,126.169,24.409)
O6: (65.189,126.525,31.876)
O4': (67.389,124.597,25.816)
C8: (66.728,126.382,27.892)
C2: (63.773,123.912,29.948)
C6: (64.968,125.828,30.884)
C5: (65.562,125.909,29.607)
C4: (65.228,124.970,28.664)
P: (69.866,128.120,25.725)
C4': (67.364,125.301,24.541)
C2': (65.109,125.068,25.296)
O2': (64.586,123.980,24.563)
N1: (64.056,124.786,30.960)
N2: (62.846,122.971,30.214)
N3: (64.351,123.954,28.761)
N7: (66.495,126.808,29.100)
N9: (66.007,125.258,27.574)
O5': (68.597,127.189,25.432)
O3': (65.593,126.341,23.224)
OP2: (69.640,128.813,27.018)
C3': (66.027,126.038,24.546)
C1': (66.067,124.499,26.336)
C5': (68.600,126.169,24.409)
O6: (65.189,126.525,31.876)
O4': (67.389,124.597,25.816)
C8: (66.728,126.382,27.892)
C2: (63.773,123.912,29.948)
C6: (64.968,125.828,30.884)
C5: (65.562,125.909,29.607)
C4: (65.228,124.970,28.664)
P: (69.866,128.120,25.725)
C4': (67.364,125.301,24.541)
C2': (65.109,125.068,25.296)
O2': (64.586,123.980,24.563)
N1: (64.056,124.786,30.960)
N2: (62.846,122.971,30.214)
N3: (64.351,123.954,28.761)
N7: (66.495,126.808,29.100)
N9: (66.007,125.258,27.574)
O5': (68.597,127.189,25.432)
O3': (65.593,126.341,23.224)
Image (generated by PyMOL):