Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A122:A121
Extra
PDB:
ATOM 1 O3' C A 121 108.325 61.878 -12.172 1.00 67.18 O
ATOM 2 P U A 122 107.165 61.961 -11.065 1.00 67.29 P
ATOM 3 OP1 U A 122 106.772 60.563 -10.779 1.00 67.99 O
ATOM 4 OP2 U A 122 106.139 62.939 -11.517 1.00 67.02 O
ATOM 5 O5' U A 122 107.913 62.514 -9.791 1.00 64.58 O
ATOM 6 C5' U A 122 108.935 61.743 -9.172 1.00 64.03 C
ATOM 7 C4' U A 122 109.540 62.520 -8.049 1.00 64.84 C
ATOM 8 O4' U A 122 110.126 63.720 -8.596 1.00 65.97 O
ATOM 9 C3' U A 122 108.555 63.037 -7.015 1.00 66.02 C
ATOM 10 O3' U A 122 108.249 62.079 -6.041 1.00 67.72 O
ATOM 11 C2' U A 122 109.282 64.237 -6.430 1.00 65.15 C
ATOM 12 O2' U A 122 110.244 63.888 -5.462 1.00 65.19 O
ATOM 13 C1' U A 122 109.997 64.783 -7.662 1.00 64.62 C
ATOM 14 N1 U A 122 109.250 65.890 -8.280 1.00 62.46 N
ATOM 15 C2 U A 122 109.263 67.102 -7.612 1.00 60.82 C
ATOM 16 O2 U A 122 109.854 67.274 -6.567 1.00 58.52 O
ATOM 17 N3 U A 122 108.553 68.104 -8.214 1.00 60.70 N
ATOM 18 C4 U A 122 107.842 68.029 -9.382 1.00 60.49 C
ATOM 19 O4 U A 122 107.244 69.030 -9.778 1.00 62.57 O
ATOM 20 C5 U A 122 107.868 66.745 -10.023 1.00 59.93 C
ATOM 21 C6 U A 122 108.555 65.744 -9.467 1.00 61.02 C
ATOM 22 P A A 123 106.725 61.879 -5.584 1.00 68.08 P
ATOM 23 OP1 A A 123 105.985 61.224 -6.725 1.00 66.32 O
ATOM 24 OP2 A A 123 106.276 63.188 -5.034 1.00 66.83 O
ATOM 25 O5' A A 123 106.850 60.836 -4.392 1.00 68.14 O
TER
ATOM 1 O3' C B 120 108.035 65.001 -17.476 1.00 63.55 O
ATOM 2 P C B 121 106.891 64.910 -16.348 1.00 64.97 P
ATOM 3 OP1 C B 121 105.937 63.906 -16.896 1.00 64.87 O
ATOM 4 OP2 C B 121 106.448 66.280 -16.016 1.00 63.01 O
ATOM 5 O5' C B 121 107.635 64.292 -15.084 1.00 65.72 O
ATOM 6 C5' C B 121 108.325 63.032 -15.196 1.00 67.00 C
ATOM 7 C4' C B 121 109.372 62.896 -14.115 1.00 66.48 C
ATOM 8 O4' C B 121 110.386 63.914 -14.283 1.00 65.52 O
ATOM 9 C3' C B 121 108.888 63.070 -12.685 1.00 66.54 C
ATOM 10 O3' C B 121 108.325 61.878 -12.172 1.00 67.18 O
ATOM 11 C2' C B 121 110.164 63.466 -11.955 1.00 65.79 C
ATOM 12 O2' C B 121 110.979 62.363 -11.618 1.00 65.19 O
ATOM 13 C1' C B 121 110.869 64.315 -13.014 1.00 65.17 C
ATOM 14 N1 C B 121 110.574 65.746 -12.832 1.00 64.17 N
ATOM 15 C2 C B 121 111.150 66.420 -11.737 1.00 64.03 C
ATOM 16 O2 C B 121 111.925 65.798 -10.981 1.00 63.22 O
ATOM 17 N3 C B 121 110.852 67.723 -11.536 1.00 61.82 N
ATOM 18 C4 C B 121 110.037 68.356 -12.378 1.00 61.71 C
ATOM 19 N4 C B 121 109.769 69.639 -12.137 1.00 63.35 N
ATOM 20 C5 C B 121 109.456 67.703 -13.505 1.00 61.65 C
ATOM 21 C6 C B 121 109.748 66.412 -13.692 1.00 61.97 C
ATOM 22 P U B 122 107.165 61.961 -11.065 1.00 67.29 P
ATOM 23 OP1 U B 122 106.772 60.563 -10.779 1.00 67.99 O
ATOM 24 OP2 U B 122 106.139 62.939 -11.517 1.00 67.02 O
ATOM 25 O5' U B 122 107.913 62.514 -9.791 1.00 64.58 O
TER
ATOM 2 P U A 122 107.165 61.961 -11.065 1.00 67.29 P
ATOM 3 OP1 U A 122 106.772 60.563 -10.779 1.00 67.99 O
ATOM 4 OP2 U A 122 106.139 62.939 -11.517 1.00 67.02 O
ATOM 5 O5' U A 122 107.913 62.514 -9.791 1.00 64.58 O
ATOM 6 C5' U A 122 108.935 61.743 -9.172 1.00 64.03 C
ATOM 7 C4' U A 122 109.540 62.520 -8.049 1.00 64.84 C
ATOM 8 O4' U A 122 110.126 63.720 -8.596 1.00 65.97 O
ATOM 9 C3' U A 122 108.555 63.037 -7.015 1.00 66.02 C
ATOM 10 O3' U A 122 108.249 62.079 -6.041 1.00 67.72 O
ATOM 11 C2' U A 122 109.282 64.237 -6.430 1.00 65.15 C
ATOM 12 O2' U A 122 110.244 63.888 -5.462 1.00 65.19 O
ATOM 13 C1' U A 122 109.997 64.783 -7.662 1.00 64.62 C
ATOM 14 N1 U A 122 109.250 65.890 -8.280 1.00 62.46 N
ATOM 15 C2 U A 122 109.263 67.102 -7.612 1.00 60.82 C
ATOM 16 O2 U A 122 109.854 67.274 -6.567 1.00 58.52 O
ATOM 17 N3 U A 122 108.553 68.104 -8.214 1.00 60.70 N
ATOM 18 C4 U A 122 107.842 68.029 -9.382 1.00 60.49 C
ATOM 19 O4 U A 122 107.244 69.030 -9.778 1.00 62.57 O
ATOM 20 C5 U A 122 107.868 66.745 -10.023 1.00 59.93 C
ATOM 21 C6 U A 122 108.555 65.744 -9.467 1.00 61.02 C
ATOM 22 P A A 123 106.725 61.879 -5.584 1.00 68.08 P
ATOM 23 OP1 A A 123 105.985 61.224 -6.725 1.00 66.32 O
ATOM 24 OP2 A A 123 106.276 63.188 -5.034 1.00 66.83 O
ATOM 25 O5' A A 123 106.850 60.836 -4.392 1.00 68.14 O
TER
ATOM 1 O3' C B 120 108.035 65.001 -17.476 1.00 63.55 O
ATOM 2 P C B 121 106.891 64.910 -16.348 1.00 64.97 P
ATOM 3 OP1 C B 121 105.937 63.906 -16.896 1.00 64.87 O
ATOM 4 OP2 C B 121 106.448 66.280 -16.016 1.00 63.01 O
ATOM 5 O5' C B 121 107.635 64.292 -15.084 1.00 65.72 O
ATOM 6 C5' C B 121 108.325 63.032 -15.196 1.00 67.00 C
ATOM 7 C4' C B 121 109.372 62.896 -14.115 1.00 66.48 C
ATOM 8 O4' C B 121 110.386 63.914 -14.283 1.00 65.52 O
ATOM 9 C3' C B 121 108.888 63.070 -12.685 1.00 66.54 C
ATOM 10 O3' C B 121 108.325 61.878 -12.172 1.00 67.18 O
ATOM 11 C2' C B 121 110.164 63.466 -11.955 1.00 65.79 C
ATOM 12 O2' C B 121 110.979 62.363 -11.618 1.00 65.19 O
ATOM 13 C1' C B 121 110.869 64.315 -13.014 1.00 65.17 C
ATOM 14 N1 C B 121 110.574 65.746 -12.832 1.00 64.17 N
ATOM 15 C2 C B 121 111.150 66.420 -11.737 1.00 64.03 C
ATOM 16 O2 C B 121 111.925 65.798 -10.981 1.00 63.22 O
ATOM 17 N3 C B 121 110.852 67.723 -11.536 1.00 61.82 N
ATOM 18 C4 C B 121 110.037 68.356 -12.378 1.00 61.71 C
ATOM 19 N4 C B 121 109.769 69.639 -12.137 1.00 63.35 N
ATOM 20 C5 C B 121 109.456 67.703 -13.505 1.00 61.65 C
ATOM 21 C6 C B 121 109.748 66.412 -13.692 1.00 61.97 C
ATOM 22 P U B 122 107.165 61.961 -11.065 1.00 67.29 P
ATOM 23 OP1 U B 122 106.772 60.563 -10.779 1.00 67.99 O
ATOM 24 OP2 U B 122 106.139 62.939 -11.517 1.00 67.02 O
ATOM 25 O5' U B 122 107.913 62.514 -9.791 1.00 64.58 O
TER
Atoms:
C4: (107.842,68.029,-9.382)
N3: (108.553,68.104,-8.214)
OP1: (106.772,60.563,-10.779)
OP2: (106.139,62.939,-11.517)
C2: (109.263,67.102,-7.612)
C1': (109.997,64.783,-7.662)
C3': (108.555,63.037,-7.015)
O5': (107.913,62.514,-9.791)
O4': (110.126,63.720,-8.596)
C5': (108.935,61.743,-9.172)
P: (107.165,61.961,-11.065)
C4': (109.540,62.520,-8.049)
C2': (109.282,64.237,-6.430)
O2': (110.244,63.888,-5.462)
N1: (109.250,65.890,-8.280)
O4: (107.244,69.030,-9.778)
O2: (109.854,67.274,-6.567)
C6: (108.555,65.744,-9.467)
C5: (107.868,66.745,-10.023)
O3': (108.249,62.079,-6.041)
N3: (108.553,68.104,-8.214)
OP1: (106.772,60.563,-10.779)
OP2: (106.139,62.939,-11.517)
C2: (109.263,67.102,-7.612)
C1': (109.997,64.783,-7.662)
C3': (108.555,63.037,-7.015)
O5': (107.913,62.514,-9.791)
O4': (110.126,63.720,-8.596)
C5': (108.935,61.743,-9.172)
P: (107.165,61.961,-11.065)
C4': (109.540,62.520,-8.049)
C2': (109.282,64.237,-6.430)
O2': (110.244,63.888,-5.462)
N1: (109.250,65.890,-8.280)
O4: (107.244,69.030,-9.778)
O2: (109.854,67.274,-6.567)
C6: (108.555,65.744,-9.467)
C5: (107.868,66.745,-10.023)
O3': (108.249,62.079,-6.041)
C2: (111.150,66.420,-11.737)
OP1: (105.937,63.906,-16.896)
OP2: (106.448,66.280,-16.016)
C4: (110.037,68.356,-12.378)
O5': (107.635,64.292,-15.084)
C3': (108.888,63.070,-12.685)
C1': (110.869,64.315,-13.014)
O4': (110.386,63.914,-14.283)
C5': (108.325,63.032,-15.196)
P: (106.891,64.910,-16.348)
O2: (111.925,65.798,-10.981)
C4': (109.372,62.896,-14.115)
C2': (110.164,63.466,-11.955)
O2': (110.979,62.363,-11.618)
N1: (110.574,65.746,-12.832)
N3: (110.852,67.723,-11.536)
N4: (109.769,69.639,-12.137)
C6: (109.748,66.412,-13.692)
C5: (109.456,67.703,-13.505)
O3': (108.325,61.878,-12.172)
OP1: (105.937,63.906,-16.896)
OP2: (106.448,66.280,-16.016)
C4: (110.037,68.356,-12.378)
O5': (107.635,64.292,-15.084)
C3': (108.888,63.070,-12.685)
C1': (110.869,64.315,-13.014)
O4': (110.386,63.914,-14.283)
C5': (108.325,63.032,-15.196)
P: (106.891,64.910,-16.348)
O2: (111.925,65.798,-10.981)
C4': (109.372,62.896,-14.115)
C2': (110.164,63.466,-11.955)
O2': (110.979,62.363,-11.618)
N1: (110.574,65.746,-12.832)
N3: (110.852,67.723,-11.536)
N4: (109.769,69.639,-12.137)
C6: (109.748,66.412,-13.692)
C5: (109.456,67.703,-13.505)
O3': (108.325,61.878,-12.172)
Image (generated by PyMOL):