ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01197:01200

Extra

PDB:
ATOM 1 O3' U A1196 39.518 110.496 126.172 1.00 48.38 O
ATOM 2 P C A1197 40.211 109.091 125.830 1.00 49.68 P
ATOM 3 OP1 C A1197 40.791 108.628 127.120 1.00 51.59 O
ATOM 4 OP2 C A1197 41.073 109.193 124.629 1.00 49.42 O
ATOM 5 O5' C A1197 38.998 108.131 125.467 1.00 49.90 O
ATOM 6 C5' C A1197 38.189 108.347 124.298 1.00 45.14 C
ATOM 7 C4' C A1197 37.007 107.415 124.337 1.00 43.33 C
ATOM 8 O4' C A1197 36.246 107.666 125.544 1.00 40.27 O
ATOM 9 C3' C A1197 35.988 107.549 123.225 1.00 42.33 C
ATOM 10 O3' C A1197 36.409 106.774 122.111 1.00 50.22 O
ATOM 11 C2' C A1197 34.755 106.911 123.857 1.00 41.06 C
ATOM 12 O2' C A1197 34.803 105.496 123.823 1.00 38.93 O
ATOM 13 C1' C A1197 34.883 107.363 125.317 1.00 37.50 C
ATOM 14 N1 C A1197 34.061 108.544 125.651 1.00 33.86 N
ATOM 15 C2 C A1197 32.676 108.392 125.699 1.00 32.18 C
ATOM 16 O2 C A1197 32.194 107.270 125.526 1.00 34.49 O
ATOM 17 N3 C A1197 31.901 109.466 125.939 1.00 29.78 N
ATOM 18 C4 C A1197 32.461 110.656 126.143 1.00 28.83 C
ATOM 19 N4 C A1197 31.649 111.690 126.349 1.00 28.82 N
ATOM 20 C5 C A1197 33.873 110.836 126.137 1.00 25.67 C
ATOM 21 C6 C A1197 34.627 109.766 125.893 1.00 28.44 C
ATOM 22 P G A1198 36.865 107.490 120.746 1.00 53.64 P
ATOM 23 OP1 G A1198 36.628 106.500 119.656 1.00 51.91 O
ATOM 24 OP2 G A1198 38.229 108.067 120.941 1.00 52.16 O
ATOM 25 O5' G A1198 35.858 108.708 120.582 1.00 48.51 O
TER

ATOM 1 O3' G B1199 32.966 116.113 124.813 1.00 33.96 O
ATOM 2 P G B1200 32.808 115.806 126.381 1.00 33.16 P
ATOM 3 OP1 G B1200 33.674 116.785 127.088 1.00 35.27 O
ATOM 4 OP2 G B1200 33.000 114.361 126.603 1.00 31.22 O
ATOM 5 O5' G B1200 31.289 116.167 126.688 1.00 34.51 O
ATOM 6 C5' G B1200 30.795 117.506 126.519 1.00 30.71 C
ATOM 7 C4' G B1200 29.285 117.513 126.608 1.00 33.82 C
ATOM 8 O4' G B1200 28.775 116.535 125.661 1.00 34.03 O
ATOM 9 C3' G B1200 28.664 117.074 127.931 1.00 34.93 C
ATOM 10 O3' G B1200 28.613 118.136 128.888 1.00 38.53 O
ATOM 11 C2' G B1200 27.269 116.656 127.482 1.00 32.63 C
ATOM 12 O2' G B1200 26.457 117.757 127.151 1.00 32.17 O
ATOM 13 C1' G B1200 27.582 115.961 126.163 1.00 32.25 C
ATOM 14 N9 G B1200 27.768 114.518 126.303 1.00 31.75 N
ATOM 15 C8 G B1200 28.940 113.802 126.213 1.00 30.25 C
ATOM 16 N7 G B1200 28.762 112.515 126.337 1.00 29.47 N
ATOM 17 C5 G B1200 27.394 112.375 126.533 1.00 30.26 C
ATOM 18 C6 G B1200 26.602 111.214 126.718 1.00 31.17 C
ATOM 19 O6 G B1200 26.956 110.032 126.734 1.00 30.29 O
ATOM 20 N1 G B1200 25.260 111.534 126.889 1.00 31.19 N
ATOM 21 C2 G B1200 24.743 112.799 126.880 1.00 30.12 C
ATOM 22 N2 G B1200 23.426 112.902 127.076 1.00 32.25 N
ATOM 23 N3 G B1200 25.461 113.885 126.696 1.00 31.74 N
ATOM 24 C4 G B1200 26.771 113.602 126.529 1.00 30.94 C
ATOM 25 P A B1201 29.523 118.072 130.215 1.00 39.29 P
ATOM 26 OP1 A B1201 29.310 119.332 130.950 1.00 42.36 O
ATOM 27 OP2 A B1201 30.885 117.680 129.805 1.00 43.31 O
ATOM 28 O5' A B1201 28.983 116.851 131.087 1.00 41.93 O
TER

Atoms:
C2: (32.676,108.392,125.699)
OP1: (40.791,108.628,127.120)
OP2: (41.073,109.193,124.629)
C4: (32.461,110.656,126.143)
O5': (38.998,108.131,125.467)
C3': (35.988,107.549,123.225)
C1': (34.883,107.363,125.317)
O4': (36.246,107.666,125.544)
C5': (38.189,108.347,124.298)
P: (40.211,109.091,125.830)
O2: (32.194,107.270,125.526)
C4': (37.007,107.415,124.337)
C2': (34.755,106.911,123.857)
O2': (34.803,105.496,123.823)
N1: (34.061,108.544,125.651)
N3: (31.901,109.466,125.939)
N4: (31.649,111.690,126.349)
C6: (34.627,109.766,125.893)
C5: (33.873,110.836,126.137)
O3': (36.409,106.774,122.111)
OP1: (33.674,116.785,127.088)
OP2: (33.000,114.361,126.603)
C3': (28.664,117.074,127.931)
C1': (27.582,115.961,126.163)
C5': (30.795,117.506,126.519)
O6: (26.956,110.032,126.734)
O4': (28.775,116.535,125.661)
C8: (28.940,113.802,126.213)
C2: (24.743,112.799,126.880)
C6: (26.602,111.214,126.718)
C5: (27.394,112.375,126.533)
C4: (26.771,113.602,126.529)
P: (32.808,115.806,126.381)
C4': (29.285,117.513,126.608)
C2': (27.269,116.656,127.482)
O2': (26.457,117.757,127.151)
N1: (25.260,111.534,126.889)
N2: (23.426,112.902,127.076)
N3: (25.461,113.885,126.696)
N7: (28.762,112.515,126.337)
N9: (27.768,114.518,126.303)
O5': (31.289,116.167,126.688)
O3': (28.613,118.136,128.888)
Image (generated by PyMOL):
PyMOL image
show in jmol