Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A2088:A2087
Extra
PDB:
ATOM 1 O3' C A2087 129.879 112.858 33.454 1.00 93.69 O
ATOM 2 P U A2088 129.118 114.295 33.456 1.00 92.57 P
ATOM 3 OP1 U A2088 129.928 115.229 32.627 1.00 92.56 O
ATOM 4 OP2 U A2088 128.747 114.696 34.847 1.00 92.03 O
ATOM 5 O5' U A2088 127.809 114.033 32.591 1.00 90.79 O
ATOM 6 C5' U A2088 127.925 113.536 31.242 1.00 88.90 C
ATOM 7 C4' U A2088 126.568 113.460 30.588 1.00 87.53 C
ATOM 8 O4' U A2088 125.733 112.515 31.310 1.00 87.38 O
ATOM 9 C3' U A2088 125.786 114.769 30.567 1.00 86.47 C
ATOM 10 O3' U A2088 124.904 114.730 29.460 1.00 85.74 O
ATOM 11 C2' U A2088 124.963 114.681 31.840 1.00 86.17 C
ATOM 12 O2' U A2088 123.794 115.476 31.785 1.00 84.94 O
ATOM 13 C1' U A2088 124.613 113.195 31.840 1.00 86.92 C
ATOM 14 N1 U A2088 124.328 112.657 33.174 1.00 87.29 N
ATOM 15 C2 U A2088 123.041 112.237 33.414 1.00 87.02 C
ATOM 16 O2 U A2088 122.160 112.280 32.571 1.00 86.41 O
ATOM 17 N3 U A2088 122.817 111.761 34.675 1.00 87.45 N
ATOM 18 C4 U A2088 123.730 111.659 35.698 1.00 88.69 C
ATOM 19 O4 U A2088 123.364 111.205 36.785 1.00 89.41 O
ATOM 20 C5 U A2088 125.051 112.108 35.370 1.00 88.42 C
ATOM 21 C6 U A2088 125.298 112.580 34.148 1.00 87.79 C
ATOM 22 P C A2089 124.469 116.089 28.731 1.00 85.52 P
ATOM 23 OP1 C A2089 124.783 115.860 27.294 1.00 85.54 O
ATOM 24 OP2 C A2089 125.040 117.265 29.443 1.00 86.53 O
ATOM 25 O5' C A2089 122.895 116.127 28.929 1.00 83.91 O
TER
ATOM 1 O3' U B2086 132.130 109.444 38.251 1.00107.93 O
ATOM 2 P C B2087 131.462 110.907 38.198 1.00107.27 P
ATOM 3 OP1 C B2087 132.561 111.906 38.101 1.00107.01 O
ATOM 4 OP2 C B2087 130.489 110.995 39.315 1.00108.10 O
ATOM 5 O5' C B2087 130.668 110.923 36.817 1.00104.81 O
ATOM 6 C5' C B2087 131.373 110.860 35.562 1.00100.32 C
ATOM 7 C4' C B2087 130.403 110.656 34.422 1.00 97.06 C
ATOM 8 O4' C B2087 129.603 109.484 34.719 1.00 96.05 O
ATOM 9 C3' C B2087 129.346 111.736 34.186 1.00 95.02 C
ATOM 10 O3' C B2087 129.879 112.858 33.454 1.00 93.69 O
ATOM 11 C2' C B2087 128.304 110.967 33.373 1.00 94.85 C
ATOM 12 O2' C B2087 128.619 110.837 31.999 1.00 93.48 O
ATOM 13 C1' C B2087 128.382 109.571 34.005 1.00 95.41 C
ATOM 14 N1 C B2087 127.247 109.221 34.888 1.00 95.64 N
ATOM 15 C2 C B2087 126.017 108.889 34.291 1.00 94.65 C
ATOM 16 O2 C B2087 125.923 108.903 33.053 1.00 94.23 O
ATOM 17 N3 C B2087 124.968 108.564 35.073 1.00 94.29 N
ATOM 18 C4 C B2087 125.099 108.559 36.402 1.00 94.82 C
ATOM 19 N4 C B2087 124.029 108.231 37.135 1.00 94.76 N
ATOM 20 C5 C B2087 126.332 108.892 37.040 1.00 94.95 C
ATOM 21 C6 C B2087 127.372 109.214 36.253 1.00 95.70 C
ATOM 22 P U B2088 129.118 114.295 33.456 1.00 92.57 P
ATOM 23 OP1 U B2088 129.928 115.229 32.627 1.00 92.56 O
ATOM 24 OP2 U B2088 128.747 114.696 34.847 1.00 92.03 O
ATOM 25 O5' U B2088 127.809 114.033 32.591 1.00 90.79 O
TER
ATOM 2 P U A2088 129.118 114.295 33.456 1.00 92.57 P
ATOM 3 OP1 U A2088 129.928 115.229 32.627 1.00 92.56 O
ATOM 4 OP2 U A2088 128.747 114.696 34.847 1.00 92.03 O
ATOM 5 O5' U A2088 127.809 114.033 32.591 1.00 90.79 O
ATOM 6 C5' U A2088 127.925 113.536 31.242 1.00 88.90 C
ATOM 7 C4' U A2088 126.568 113.460 30.588 1.00 87.53 C
ATOM 8 O4' U A2088 125.733 112.515 31.310 1.00 87.38 O
ATOM 9 C3' U A2088 125.786 114.769 30.567 1.00 86.47 C
ATOM 10 O3' U A2088 124.904 114.730 29.460 1.00 85.74 O
ATOM 11 C2' U A2088 124.963 114.681 31.840 1.00 86.17 C
ATOM 12 O2' U A2088 123.794 115.476 31.785 1.00 84.94 O
ATOM 13 C1' U A2088 124.613 113.195 31.840 1.00 86.92 C
ATOM 14 N1 U A2088 124.328 112.657 33.174 1.00 87.29 N
ATOM 15 C2 U A2088 123.041 112.237 33.414 1.00 87.02 C
ATOM 16 O2 U A2088 122.160 112.280 32.571 1.00 86.41 O
ATOM 17 N3 U A2088 122.817 111.761 34.675 1.00 87.45 N
ATOM 18 C4 U A2088 123.730 111.659 35.698 1.00 88.69 C
ATOM 19 O4 U A2088 123.364 111.205 36.785 1.00 89.41 O
ATOM 20 C5 U A2088 125.051 112.108 35.370 1.00 88.42 C
ATOM 21 C6 U A2088 125.298 112.580 34.148 1.00 87.79 C
ATOM 22 P C A2089 124.469 116.089 28.731 1.00 85.52 P
ATOM 23 OP1 C A2089 124.783 115.860 27.294 1.00 85.54 O
ATOM 24 OP2 C A2089 125.040 117.265 29.443 1.00 86.53 O
ATOM 25 O5' C A2089 122.895 116.127 28.929 1.00 83.91 O
TER
ATOM 1 O3' U B2086 132.130 109.444 38.251 1.00107.93 O
ATOM 2 P C B2087 131.462 110.907 38.198 1.00107.27 P
ATOM 3 OP1 C B2087 132.561 111.906 38.101 1.00107.01 O
ATOM 4 OP2 C B2087 130.489 110.995 39.315 1.00108.10 O
ATOM 5 O5' C B2087 130.668 110.923 36.817 1.00104.81 O
ATOM 6 C5' C B2087 131.373 110.860 35.562 1.00100.32 C
ATOM 7 C4' C B2087 130.403 110.656 34.422 1.00 97.06 C
ATOM 8 O4' C B2087 129.603 109.484 34.719 1.00 96.05 O
ATOM 9 C3' C B2087 129.346 111.736 34.186 1.00 95.02 C
ATOM 10 O3' C B2087 129.879 112.858 33.454 1.00 93.69 O
ATOM 11 C2' C B2087 128.304 110.967 33.373 1.00 94.85 C
ATOM 12 O2' C B2087 128.619 110.837 31.999 1.00 93.48 O
ATOM 13 C1' C B2087 128.382 109.571 34.005 1.00 95.41 C
ATOM 14 N1 C B2087 127.247 109.221 34.888 1.00 95.64 N
ATOM 15 C2 C B2087 126.017 108.889 34.291 1.00 94.65 C
ATOM 16 O2 C B2087 125.923 108.903 33.053 1.00 94.23 O
ATOM 17 N3 C B2087 124.968 108.564 35.073 1.00 94.29 N
ATOM 18 C4 C B2087 125.099 108.559 36.402 1.00 94.82 C
ATOM 19 N4 C B2087 124.029 108.231 37.135 1.00 94.76 N
ATOM 20 C5 C B2087 126.332 108.892 37.040 1.00 94.95 C
ATOM 21 C6 C B2087 127.372 109.214 36.253 1.00 95.70 C
ATOM 22 P U B2088 129.118 114.295 33.456 1.00 92.57 P
ATOM 23 OP1 U B2088 129.928 115.229 32.627 1.00 92.56 O
ATOM 24 OP2 U B2088 128.747 114.696 34.847 1.00 92.03 O
ATOM 25 O5' U B2088 127.809 114.033 32.591 1.00 90.79 O
TER
Atoms:
C4: (123.730,111.659,35.698)
N3: (122.817,111.761,34.675)
OP1: (129.928,115.229,32.627)
OP2: (128.747,114.696,34.847)
C2: (123.041,112.237,33.414)
C1': (124.613,113.195,31.840)
C3': (125.786,114.769,30.567)
O5': (127.809,114.033,32.591)
O4': (125.733,112.515,31.310)
C5': (127.925,113.536,31.242)
P: (129.118,114.295,33.456)
C4': (126.568,113.460,30.588)
C2': (124.963,114.681,31.840)
O2': (123.794,115.476,31.785)
N1: (124.328,112.657,33.174)
O4: (123.364,111.205,36.785)
O2: (122.160,112.280,32.571)
C6: (125.298,112.580,34.148)
C5: (125.051,112.108,35.370)
O3': (124.904,114.730,29.460)
N3: (122.817,111.761,34.675)
OP1: (129.928,115.229,32.627)
OP2: (128.747,114.696,34.847)
C2: (123.041,112.237,33.414)
C1': (124.613,113.195,31.840)
C3': (125.786,114.769,30.567)
O5': (127.809,114.033,32.591)
O4': (125.733,112.515,31.310)
C5': (127.925,113.536,31.242)
P: (129.118,114.295,33.456)
C4': (126.568,113.460,30.588)
C2': (124.963,114.681,31.840)
O2': (123.794,115.476,31.785)
N1: (124.328,112.657,33.174)
O4: (123.364,111.205,36.785)
O2: (122.160,112.280,32.571)
C6: (125.298,112.580,34.148)
C5: (125.051,112.108,35.370)
O3': (124.904,114.730,29.460)
C2: (126.017,108.889,34.291)
OP1: (132.561,111.906,38.101)
OP2: (130.489,110.995,39.315)
C4: (125.099,108.559,36.402)
O5': (130.668,110.923,36.817)
C3': (129.346,111.736,34.186)
C1': (128.382,109.571,34.005)
O4': (129.603,109.484,34.719)
C5': (131.373,110.860,35.562)
P: (131.462,110.907,38.198)
O2: (125.923,108.903,33.053)
C4': (130.403,110.656,34.422)
C2': (128.304,110.967,33.373)
O2': (128.619,110.837,31.999)
N1: (127.247,109.221,34.888)
N3: (124.968,108.564,35.073)
N4: (124.029,108.231,37.135)
C6: (127.372,109.214,36.253)
C5: (126.332,108.892,37.040)
O3': (129.879,112.858,33.454)
OP1: (132.561,111.906,38.101)
OP2: (130.489,110.995,39.315)
C4: (125.099,108.559,36.402)
O5': (130.668,110.923,36.817)
C3': (129.346,111.736,34.186)
C1': (128.382,109.571,34.005)
O4': (129.603,109.484,34.719)
C5': (131.373,110.860,35.562)
P: (131.462,110.907,38.198)
O2: (125.923,108.903,33.053)
C4': (130.403,110.656,34.422)
C2': (128.304,110.967,33.373)
O2': (128.619,110.837,31.999)
N1: (127.247,109.221,34.888)
N3: (124.968,108.564,35.073)
N4: (124.029,108.231,37.135)
C6: (127.372,109.214,36.253)
C5: (126.332,108.892,37.040)
O3': (129.879,112.858,33.454)
Image (generated by PyMOL):