ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01197:01200

Extra

PDB:
ATOM 1 O3' U A1196 39.564 111.447 126.405 1.00 45.23 O
ATOM 2 P C A1197 39.654 109.940 125.880 1.00 46.65 P
ATOM 3 OP1 C A1197 39.375 109.081 127.054 1.00 45.51 O
ATOM 4 OP2 C A1197 40.920 109.755 125.132 1.00 48.66 O
ATOM 5 O5' C A1197 38.428 109.866 124.859 1.00 46.89 O
ATOM 6 C5' C A1197 38.336 108.826 123.869 1.00 42.20 C
ATOM 7 C4' C A1197 37.016 108.096 123.985 1.00 40.26 C
ATOM 8 O4' C A1197 36.290 108.542 125.163 1.00 38.94 O
ATOM 9 C3' C A1197 36.006 108.349 122.881 1.00 39.58 C
ATOM 10 O3' C A1197 36.323 107.604 121.710 1.00 42.80 O
ATOM 11 C2' C A1197 34.721 107.829 123.526 1.00 38.44 C
ATOM 12 O2' C A1197 34.587 106.416 123.493 1.00 37.00 O
ATOM 13 C1' C A1197 34.909 108.266 124.983 1.00 36.73 C
ATOM 14 N1 C A1197 34.104 109.456 125.339 1.00 34.92 N
ATOM 15 C2 C A1197 32.727 109.293 125.489 1.00 32.42 C
ATOM 16 O2 C A1197 32.252 108.162 125.386 1.00 33.21 O
ATOM 17 N3 C A1197 31.953 110.366 125.748 1.00 32.42 N
ATOM 18 C4 C A1197 32.510 111.571 125.877 1.00 34.23 C
ATOM 19 N4 C A1197 31.697 112.613 126.119 1.00 35.36 N
ATOM 20 C5 C A1197 33.919 111.766 125.763 1.00 29.36 C
ATOM 21 C6 C A1197 34.671 110.692 125.498 1.00 31.50 C
ATOM 22 P G A1198 36.890 108.351 120.398 1.00 41.74 P
ATOM 23 OP1 G A1198 36.734 107.393 119.269 1.00 42.27 O
ATOM 24 OP2 G A1198 38.227 108.912 120.712 1.00 42.02 O
ATOM 25 O5' G A1198 35.919 109.586 120.165 1.00 40.10 O
TER

ATOM 1 O3' G B1199 32.949 116.882 124.529 1.00 37.89 O
ATOM 2 P G B1200 32.675 116.605 126.086 1.00 35.02 P
ATOM 3 OP1 G B1200 33.444 117.606 126.861 1.00 35.60 O
ATOM 4 OP2 G B1200 32.877 115.161 126.344 1.00 32.04 O
ATOM 5 O5' G B1200 31.127 116.943 126.260 1.00 37.75 O
ATOM 6 C5' G B1200 30.648 118.309 126.187 1.00 37.33 C
ATOM 7 C4' G B1200 29.135 118.343 126.283 1.00 39.11 C
ATOM 8 O4' G B1200 28.602 117.366 125.348 1.00 38.98 O
ATOM 9 C3' G B1200 28.512 117.938 127.618 1.00 40.87 C
ATOM 10 O3' G B1200 28.459 119.022 128.550 1.00 42.43 O
ATOM 11 C2' G B1200 27.113 117.518 127.188 1.00 39.23 C
ATOM 12 O2' G B1200 26.288 118.622 126.901 1.00 38.33 O
ATOM 13 C1' G B1200 27.406 116.812 125.867 1.00 39.36 C
ATOM 14 N9 G B1200 27.583 115.372 126.016 1.00 40.52 N
ATOM 15 C8 G B1200 28.758 114.662 125.953 1.00 40.70 C
ATOM 16 N7 G B1200 28.584 113.376 126.093 1.00 42.41 N
ATOM 17 C5 G B1200 27.213 113.230 126.265 1.00 42.14 C
ATOM 18 C6 G B1200 26.424 112.062 126.446 1.00 43.69 C
ATOM 19 O6 G B1200 26.786 110.877 126.473 1.00 44.48 O
ATOM 20 N1 G B1200 25.080 112.375 126.596 1.00 43.14 N
ATOM 21 C2 G B1200 24.558 113.638 126.571 1.00 43.38 C
ATOM 22 N2 G B1200 23.236 113.730 126.769 1.00 43.04 N
ATOM 23 N3 G B1200 25.275 114.731 126.378 1.00 42.63 N
ATOM 24 C4 G B1200 26.585 114.455 126.235 1.00 41.58 C
ATOM 25 P A B1201 29.357 118.984 129.886 1.00 43.93 P
ATOM 26 OP1 A B1201 29.056 120.232 130.622 1.00 45.40 O
ATOM 27 OP2 A B1201 30.750 118.685 129.506 1.00 45.00 O
ATOM 28 O5' A B1201 28.848 117.725 130.730 1.00 44.72 O
TER

Atoms:
C2: (32.727,109.293,125.489)
OP1: (39.375,109.081,127.054)
OP2: (40.920,109.755,125.132)
C4: (32.510,111.571,125.877)
O5': (38.428,109.866,124.859)
C3': (36.006,108.349,122.881)
C1': (34.909,108.266,124.983)
O4': (36.290,108.542,125.163)
C5': (38.336,108.826,123.869)
P: (39.654,109.940,125.880)
O2: (32.252,108.162,125.386)
C4': (37.016,108.096,123.985)
C2': (34.721,107.829,123.526)
O2': (34.587,106.416,123.493)
N1: (34.104,109.456,125.339)
N3: (31.953,110.366,125.748)
N4: (31.697,112.613,126.119)
C6: (34.671,110.692,125.498)
C5: (33.919,111.766,125.763)
O3': (36.323,107.604,121.710)
OP1: (33.444,117.606,126.861)
OP2: (32.877,115.161,126.344)
C3': (28.512,117.938,127.618)
C1': (27.406,116.812,125.867)
C5': (30.648,118.309,126.187)
O6: (26.786,110.877,126.473)
O4': (28.602,117.366,125.348)
C8: (28.758,114.662,125.953)
C2: (24.558,113.638,126.571)
C6: (26.424,112.062,126.446)
C5: (27.213,113.230,126.265)
C4: (26.585,114.455,126.235)
P: (32.675,116.605,126.086)
C4': (29.135,118.343,126.283)
C2': (27.113,117.518,127.188)
O2': (26.288,118.622,126.901)
N1: (25.080,112.375,126.596)
N2: (23.236,113.730,126.769)
N3: (25.275,114.731,126.378)
N7: (28.584,113.376,126.093)
N9: (27.583,115.372,126.016)
O5': (31.127,116.943,126.260)
O3': (28.459,119.022,128.550)
Image (generated by PyMOL):
PyMOL image
show in jmol