Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01197:01200
Extra
PDB:
ATOM 1 O3' U A1196 39.500 111.650 126.400 1.00 43.23 O
ATOM 2 P C A1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 3 OP1 C A1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 4 OP2 C A1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 5 O5' C A1197 38.394 110.101 124.794 1.00 42.33 O
ATOM 6 C5' C A1197 38.303 109.028 123.852 1.00 38.55 C
ATOM 7 C4' C A1197 36.977 108.314 123.982 1.00 37.31 C
ATOM 8 O4' C A1197 36.256 108.762 125.162 1.00 36.36 O
ATOM 9 C3' C A1197 35.969 108.585 122.884 1.00 37.21 C
ATOM 10 O3' C A1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 11 C2' C A1197 34.684 108.060 123.523 1.00 36.06 C
ATOM 12 O2' C A1197 34.565 106.649 123.484 1.00 35.53 O
ATOM 13 C1' C A1197 34.872 108.486 124.984 1.00 34.75 C
ATOM 14 N1 C A1197 34.068 109.678 125.331 1.00 32.90 N
ATOM 15 C2 C A1197 32.684 109.532 125.433 1.00 29.71 C
ATOM 16 O2 C A1197 32.190 108.414 125.275 1.00 31.42 O
ATOM 17 N3 C A1197 31.920 110.607 125.699 1.00 30.51 N
ATOM 18 C4 C A1197 32.487 111.799 125.872 1.00 31.71 C
ATOM 19 N4 C A1197 31.682 112.842 126.113 1.00 32.45 N
ATOM 20 C5 C A1197 33.900 111.979 125.802 1.00 29.60 C
ATOM 21 C6 C A1197 34.646 110.902 125.533 1.00 30.61 C
ATOM 22 P G A1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 23 OP1 G A1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 24 OP2 G A1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 25 O5' G A1198 35.936 109.848 120.161 1.00 34.87 O
TER
ATOM 1 O3' G B1199 32.871 117.113 124.525 1.00 36.27 O
ATOM 2 P G B1200 32.614 116.826 126.082 1.00 32.47 P
ATOM 3 OP1 G B1200 33.395 117.822 126.855 1.00 34.14 O
ATOM 4 OP2 G B1200 32.817 115.382 126.332 1.00 30.72 O
ATOM 5 O5' G B1200 31.069 117.162 126.273 1.00 34.84 O
ATOM 6 C5' G B1200 30.585 118.522 126.184 1.00 34.21 C
ATOM 7 C4' G B1200 29.073 118.551 126.294 1.00 36.21 C
ATOM 8 O4' G B1200 28.534 117.588 125.349 1.00 35.53 O
ATOM 9 C3' G B1200 28.465 118.127 127.629 1.00 36.86 C
ATOM 10 O3' G B1200 28.419 119.204 128.572 1.00 37.98 O
ATOM 11 C2' G B1200 27.064 117.700 127.204 1.00 36.00 C
ATOM 12 O2' G B1200 26.220 118.791 126.917 1.00 36.53 O
ATOM 13 C1' G B1200 27.355 117.011 125.875 1.00 35.97 C
ATOM 14 N9 G B1200 27.560 115.575 126.008 1.00 37.02 N
ATOM 15 C8 G B1200 28.747 114.889 125.918 1.00 37.47 C
ATOM 16 N7 G B1200 28.600 113.599 126.053 1.00 40.40 N
ATOM 17 C5 G B1200 27.236 113.426 126.250 1.00 39.78 C
ATOM 18 C6 G B1200 26.474 112.243 126.441 1.00 41.84 C
ATOM 19 O6 G B1200 26.861 111.066 126.469 1.00 44.11 O
ATOM 20 N1 G B1200 25.125 112.528 126.606 1.00 41.47 N
ATOM 21 C2 G B1200 24.577 113.780 126.595 1.00 40.87 C
ATOM 22 N2 G B1200 23.254 113.843 126.806 1.00 40.65 N
ATOM 23 N3 G B1200 25.270 114.888 126.401 1.00 39.89 N
ATOM 24 C4 G B1200 26.584 114.637 126.237 1.00 38.28 C
ATOM 25 P A B1201 29.351 119.171 129.888 1.00 39.28 P
ATOM 26 OP1 A B1201 29.121 120.456 130.580 1.00 39.99 O
ATOM 27 OP2 A B1201 30.723 118.795 129.496 1.00 40.37 O
ATOM 28 O5' A B1201 28.810 117.962 130.783 1.00 39.32 O
TER
ATOM 2 P C A1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 3 OP1 C A1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 4 OP2 C A1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 5 O5' C A1197 38.394 110.101 124.794 1.00 42.33 O
ATOM 6 C5' C A1197 38.303 109.028 123.852 1.00 38.55 C
ATOM 7 C4' C A1197 36.977 108.314 123.982 1.00 37.31 C
ATOM 8 O4' C A1197 36.256 108.762 125.162 1.00 36.36 O
ATOM 9 C3' C A1197 35.969 108.585 122.884 1.00 37.21 C
ATOM 10 O3' C A1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 11 C2' C A1197 34.684 108.060 123.523 1.00 36.06 C
ATOM 12 O2' C A1197 34.565 106.649 123.484 1.00 35.53 O
ATOM 13 C1' C A1197 34.872 108.486 124.984 1.00 34.75 C
ATOM 14 N1 C A1197 34.068 109.678 125.331 1.00 32.90 N
ATOM 15 C2 C A1197 32.684 109.532 125.433 1.00 29.71 C
ATOM 16 O2 C A1197 32.190 108.414 125.275 1.00 31.42 O
ATOM 17 N3 C A1197 31.920 110.607 125.699 1.00 30.51 N
ATOM 18 C4 C A1197 32.487 111.799 125.872 1.00 31.71 C
ATOM 19 N4 C A1197 31.682 112.842 126.113 1.00 32.45 N
ATOM 20 C5 C A1197 33.900 111.979 125.802 1.00 29.60 C
ATOM 21 C6 C A1197 34.646 110.902 125.533 1.00 30.61 C
ATOM 22 P G A1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 23 OP1 G A1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 24 OP2 G A1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 25 O5' G A1198 35.936 109.848 120.161 1.00 34.87 O
TER
ATOM 1 O3' G B1199 32.871 117.113 124.525 1.00 36.27 O
ATOM 2 P G B1200 32.614 116.826 126.082 1.00 32.47 P
ATOM 3 OP1 G B1200 33.395 117.822 126.855 1.00 34.14 O
ATOM 4 OP2 G B1200 32.817 115.382 126.332 1.00 30.72 O
ATOM 5 O5' G B1200 31.069 117.162 126.273 1.00 34.84 O
ATOM 6 C5' G B1200 30.585 118.522 126.184 1.00 34.21 C
ATOM 7 C4' G B1200 29.073 118.551 126.294 1.00 36.21 C
ATOM 8 O4' G B1200 28.534 117.588 125.349 1.00 35.53 O
ATOM 9 C3' G B1200 28.465 118.127 127.629 1.00 36.86 C
ATOM 10 O3' G B1200 28.419 119.204 128.572 1.00 37.98 O
ATOM 11 C2' G B1200 27.064 117.700 127.204 1.00 36.00 C
ATOM 12 O2' G B1200 26.220 118.791 126.917 1.00 36.53 O
ATOM 13 C1' G B1200 27.355 117.011 125.875 1.00 35.97 C
ATOM 14 N9 G B1200 27.560 115.575 126.008 1.00 37.02 N
ATOM 15 C8 G B1200 28.747 114.889 125.918 1.00 37.47 C
ATOM 16 N7 G B1200 28.600 113.599 126.053 1.00 40.40 N
ATOM 17 C5 G B1200 27.236 113.426 126.250 1.00 39.78 C
ATOM 18 C6 G B1200 26.474 112.243 126.441 1.00 41.84 C
ATOM 19 O6 G B1200 26.861 111.066 126.469 1.00 44.11 O
ATOM 20 N1 G B1200 25.125 112.528 126.606 1.00 41.47 N
ATOM 21 C2 G B1200 24.577 113.780 126.595 1.00 40.87 C
ATOM 22 N2 G B1200 23.254 113.843 126.806 1.00 40.65 N
ATOM 23 N3 G B1200 25.270 114.888 126.401 1.00 39.89 N
ATOM 24 C4 G B1200 26.584 114.637 126.237 1.00 38.28 C
ATOM 25 P A B1201 29.351 119.171 129.888 1.00 39.28 P
ATOM 26 OP1 A B1201 29.121 120.456 130.580 1.00 39.99 O
ATOM 27 OP2 A B1201 30.723 118.795 129.496 1.00 40.37 O
ATOM 28 O5' A B1201 28.810 117.962 130.783 1.00 39.32 O
TER
Atoms:
C2: (32.684,109.532,125.433)
OP1: (39.191,109.281,127.018)
OP2: (40.862,109.918,125.185)
C4: (32.487,111.799,125.872)
O5': (38.394,110.101,124.794)
C3': (35.969,108.585,122.884)
C1': (34.872,108.486,124.984)
O4': (36.256,108.762,125.162)
C5': (38.303,109.028,123.852)
P: (39.567,110.142,125.873)
O2: (32.190,108.414,125.275)
C4': (36.977,108.314,123.982)
C2': (34.684,108.060,123.523)
O2': (34.565,106.649,123.484)
N1: (34.068,109.678,125.331)
N3: (31.920,110.607,125.699)
N4: (31.682,112.842,126.113)
C6: (34.646,110.902,125.533)
C5: (33.900,111.979,125.802)
O3': (36.288,107.847,121.709)
OP1: (39.191,109.281,127.018)
OP2: (40.862,109.918,125.185)
C4: (32.487,111.799,125.872)
O5': (38.394,110.101,124.794)
C3': (35.969,108.585,122.884)
C1': (34.872,108.486,124.984)
O4': (36.256,108.762,125.162)
C5': (38.303,109.028,123.852)
P: (39.567,110.142,125.873)
O2: (32.190,108.414,125.275)
C4': (36.977,108.314,123.982)
C2': (34.684,108.060,123.523)
O2': (34.565,106.649,123.484)
N1: (34.068,109.678,125.331)
N3: (31.920,110.607,125.699)
N4: (31.682,112.842,126.113)
C6: (34.646,110.902,125.533)
C5: (33.900,111.979,125.802)
O3': (36.288,107.847,121.709)
OP1: (33.395,117.822,126.855)
OP2: (32.817,115.382,126.332)
C3': (28.465,118.127,127.629)
C1': (27.355,117.011,125.875)
C5': (30.585,118.522,126.184)
O6: (26.861,111.066,126.469)
O4': (28.534,117.588,125.349)
C8: (28.747,114.889,125.918)
C2: (24.577,113.780,126.595)
C6: (26.474,112.243,126.441)
C5: (27.236,113.426,126.250)
C4: (26.584,114.637,126.237)
P: (32.614,116.826,126.082)
C4': (29.073,118.551,126.294)
C2': (27.064,117.700,127.204)
O2': (26.220,118.791,126.917)
N1: (25.125,112.528,126.606)
N2: (23.254,113.843,126.806)
N3: (25.270,114.888,126.401)
N7: (28.600,113.599,126.053)
N9: (27.560,115.575,126.008)
O5': (31.069,117.162,126.273)
O3': (28.419,119.204,128.572)
OP2: (32.817,115.382,126.332)
C3': (28.465,118.127,127.629)
C1': (27.355,117.011,125.875)
C5': (30.585,118.522,126.184)
O6: (26.861,111.066,126.469)
O4': (28.534,117.588,125.349)
C8: (28.747,114.889,125.918)
C2: (24.577,113.780,126.595)
C6: (26.474,112.243,126.441)
C5: (27.236,113.426,126.250)
C4: (26.584,114.637,126.237)
P: (32.614,116.826,126.082)
C4': (29.073,118.551,126.294)
C2': (27.064,117.700,127.204)
O2': (26.220,118.791,126.917)
N1: (25.125,112.528,126.606)
N2: (23.254,113.843,126.806)
N3: (25.270,114.888,126.401)
N7: (28.600,113.599,126.053)
N9: (27.560,115.575,126.008)
O5': (31.069,117.162,126.273)
O3': (28.419,119.204,128.572)
Image (generated by PyMOL):