Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:032:0172
Extra
PDB:
ATOM 1 O3' G A 31 58.442 130.384 24.030 1.00 40.90 O
ATOM 2 P C A 32 59.228 129.791 22.755 1.00 40.71 P
ATOM 3 OP1 C A 32 59.191 130.886 21.758 1.00 41.45 O
ATOM 4 OP2 C A 32 58.714 128.444 22.385 1.00 42.00 O
ATOM 5 O5' C A 32 60.730 129.627 23.268 1.00 40.43 O
ATOM 6 C5' C A 32 61.648 130.747 23.257 1.00 39.33 C
ATOM 7 C4' C A 32 61.424 131.633 24.465 1.00 38.29 C
ATOM 8 O4' C A 32 61.727 130.905 25.687 1.00 37.25 O
ATOM 9 C3' C A 32 62.323 132.854 24.552 1.00 40.00 C
ATOM 10 O3' C A 32 61.835 133.919 23.734 1.00 44.89 O
ATOM 11 C2' C A 32 62.248 133.194 26.033 1.00 37.44 C
ATOM 12 O2' C A 32 61.050 133.857 26.365 1.00 37.94 O
ATOM 13 C1' C A 32 62.245 131.799 26.660 1.00 35.06 C
ATOM 14 N1 C A 32 63.600 131.363 27.048 1.00 33.01 N
ATOM 15 C2 C A 32 64.185 131.927 28.192 1.00 34.01 C
ATOM 16 O2 C A 32 63.518 132.723 28.879 1.00 32.54 O
ATOM 17 N3 C A 32 65.457 131.590 28.521 1.00 33.36 N
ATOM 18 C4 C A 32 66.132 130.718 27.766 1.00 34.12 C
ATOM 19 N4 C A 32 67.386 130.427 28.114 1.00 33.38 N
ATOM 20 C5 C A 32 65.551 130.107 26.617 1.00 32.86 C
ATOM 21 C6 C A 32 64.295 130.452 26.300 1.00 33.42 C
ATOM 22 P U A 33 62.872 134.940 23.046 1.00 44.35 P
ATOM 23 OP1 U A 33 62.107 135.727 22.042 1.00 41.96 O
ATOM 24 OP2 U A 33 64.082 134.178 22.624 1.00 44.09 O
ATOM 25 O5' U A 33 63.290 135.917 24.231 1.00 43.57 O
TER
ATOM 1 O3' A B 171 70.849 127.218 25.592 1.00 36.93 O
ATOM 2 P G B 172 69.679 128.305 25.405 1.00 38.79 P
ATOM 3 OP1 G B 172 70.054 129.096 24.207 1.00 40.92 O
ATOM 4 OP2 G B 172 69.407 129.001 26.687 1.00 38.10 O
ATOM 5 O5' G B 172 68.375 127.454 25.059 1.00 39.52 O
ATOM 6 C5' G B 172 68.371 126.466 24.004 1.00 36.22 C
ATOM 7 C4' G B 172 67.192 125.545 24.172 1.00 37.03 C
ATOM 8 O4' G B 172 67.290 124.893 25.467 1.00 37.85 O
ATOM 9 C3' G B 172 65.830 126.228 24.195 1.00 38.54 C
ATOM 10 O3' G B 172 65.336 126.437 22.870 1.00 39.43 O
ATOM 11 C2' G B 172 64.984 125.239 24.993 1.00 38.39 C
ATOM 12 O2' G B 172 64.556 124.131 24.228 1.00 39.42 O
ATOM 13 C1' G B 172 65.995 124.737 26.027 1.00 38.63 C
ATOM 14 N9 G B 172 65.948 125.441 27.310 1.00 39.83 N
ATOM 15 C8 G B 172 66.689 126.537 27.683 1.00 40.25 C
ATOM 16 N7 G B 172 66.436 126.938 28.900 1.00 39.67 N
ATOM 17 C5 G B 172 65.469 126.056 29.359 1.00 39.99 C
ATOM 18 C6 G B 172 64.811 125.988 30.617 1.00 40.42 C
ATOM 19 O6 G B 172 64.961 126.715 31.605 1.00 40.32 O
ATOM 20 N1 G B 172 63.903 124.941 30.661 1.00 39.63 N
ATOM 21 C2 G B 172 63.659 124.066 29.634 1.00 41.26 C
ATOM 22 N2 G B 172 62.746 123.110 29.873 1.00 40.93 N
ATOM 23 N3 G B 172 64.264 124.119 28.457 1.00 41.18 N
ATOM 24 C4 G B 172 65.151 125.130 28.391 1.00 39.99 C
ATOM 25 P G B 173 64.405 127.707 22.546 1.00 42.99 P
ATOM 26 OP1 G B 173 64.395 127.880 21.074 1.00 44.72 O
ATOM 27 OP2 G B 173 64.802 128.847 23.404 1.00 47.26 O
ATOM 28 O5' G B 173 62.949 127.257 23.004 1.00 45.63 O
TER
ATOM 2 P C A 32 59.228 129.791 22.755 1.00 40.71 P
ATOM 3 OP1 C A 32 59.191 130.886 21.758 1.00 41.45 O
ATOM 4 OP2 C A 32 58.714 128.444 22.385 1.00 42.00 O
ATOM 5 O5' C A 32 60.730 129.627 23.268 1.00 40.43 O
ATOM 6 C5' C A 32 61.648 130.747 23.257 1.00 39.33 C
ATOM 7 C4' C A 32 61.424 131.633 24.465 1.00 38.29 C
ATOM 8 O4' C A 32 61.727 130.905 25.687 1.00 37.25 O
ATOM 9 C3' C A 32 62.323 132.854 24.552 1.00 40.00 C
ATOM 10 O3' C A 32 61.835 133.919 23.734 1.00 44.89 O
ATOM 11 C2' C A 32 62.248 133.194 26.033 1.00 37.44 C
ATOM 12 O2' C A 32 61.050 133.857 26.365 1.00 37.94 O
ATOM 13 C1' C A 32 62.245 131.799 26.660 1.00 35.06 C
ATOM 14 N1 C A 32 63.600 131.363 27.048 1.00 33.01 N
ATOM 15 C2 C A 32 64.185 131.927 28.192 1.00 34.01 C
ATOM 16 O2 C A 32 63.518 132.723 28.879 1.00 32.54 O
ATOM 17 N3 C A 32 65.457 131.590 28.521 1.00 33.36 N
ATOM 18 C4 C A 32 66.132 130.718 27.766 1.00 34.12 C
ATOM 19 N4 C A 32 67.386 130.427 28.114 1.00 33.38 N
ATOM 20 C5 C A 32 65.551 130.107 26.617 1.00 32.86 C
ATOM 21 C6 C A 32 64.295 130.452 26.300 1.00 33.42 C
ATOM 22 P U A 33 62.872 134.940 23.046 1.00 44.35 P
ATOM 23 OP1 U A 33 62.107 135.727 22.042 1.00 41.96 O
ATOM 24 OP2 U A 33 64.082 134.178 22.624 1.00 44.09 O
ATOM 25 O5' U A 33 63.290 135.917 24.231 1.00 43.57 O
TER
ATOM 1 O3' A B 171 70.849 127.218 25.592 1.00 36.93 O
ATOM 2 P G B 172 69.679 128.305 25.405 1.00 38.79 P
ATOM 3 OP1 G B 172 70.054 129.096 24.207 1.00 40.92 O
ATOM 4 OP2 G B 172 69.407 129.001 26.687 1.00 38.10 O
ATOM 5 O5' G B 172 68.375 127.454 25.059 1.00 39.52 O
ATOM 6 C5' G B 172 68.371 126.466 24.004 1.00 36.22 C
ATOM 7 C4' G B 172 67.192 125.545 24.172 1.00 37.03 C
ATOM 8 O4' G B 172 67.290 124.893 25.467 1.00 37.85 O
ATOM 9 C3' G B 172 65.830 126.228 24.195 1.00 38.54 C
ATOM 10 O3' G B 172 65.336 126.437 22.870 1.00 39.43 O
ATOM 11 C2' G B 172 64.984 125.239 24.993 1.00 38.39 C
ATOM 12 O2' G B 172 64.556 124.131 24.228 1.00 39.42 O
ATOM 13 C1' G B 172 65.995 124.737 26.027 1.00 38.63 C
ATOM 14 N9 G B 172 65.948 125.441 27.310 1.00 39.83 N
ATOM 15 C8 G B 172 66.689 126.537 27.683 1.00 40.25 C
ATOM 16 N7 G B 172 66.436 126.938 28.900 1.00 39.67 N
ATOM 17 C5 G B 172 65.469 126.056 29.359 1.00 39.99 C
ATOM 18 C6 G B 172 64.811 125.988 30.617 1.00 40.42 C
ATOM 19 O6 G B 172 64.961 126.715 31.605 1.00 40.32 O
ATOM 20 N1 G B 172 63.903 124.941 30.661 1.00 39.63 N
ATOM 21 C2 G B 172 63.659 124.066 29.634 1.00 41.26 C
ATOM 22 N2 G B 172 62.746 123.110 29.873 1.00 40.93 N
ATOM 23 N3 G B 172 64.264 124.119 28.457 1.00 41.18 N
ATOM 24 C4 G B 172 65.151 125.130 28.391 1.00 39.99 C
ATOM 25 P G B 173 64.405 127.707 22.546 1.00 42.99 P
ATOM 26 OP1 G B 173 64.395 127.880 21.074 1.00 44.72 O
ATOM 27 OP2 G B 173 64.802 128.847 23.404 1.00 47.26 O
ATOM 28 O5' G B 173 62.949 127.257 23.004 1.00 45.63 O
TER
Atoms:
C2: (64.185,131.927,28.192)
OP1: (59.191,130.886,21.758)
OP2: (58.714,128.444,22.385)
C4: (66.132,130.718,27.766)
O5': (60.730,129.627,23.268)
C3': (62.323,132.854,24.552)
C1': (62.245,131.799,26.660)
O4': (61.727,130.905,25.687)
C5': (61.648,130.747,23.257)
P: (59.228,129.791,22.755)
O2: (63.518,132.723,28.879)
C4': (61.424,131.633,24.465)
C2': (62.248,133.194,26.033)
O2': (61.050,133.857,26.365)
N1: (63.600,131.363,27.048)
N3: (65.457,131.590,28.521)
N4: (67.386,130.427,28.114)
C6: (64.295,130.452,26.300)
C5: (65.551,130.107,26.617)
O3': (61.835,133.919,23.734)
OP1: (59.191,130.886,21.758)
OP2: (58.714,128.444,22.385)
C4: (66.132,130.718,27.766)
O5': (60.730,129.627,23.268)
C3': (62.323,132.854,24.552)
C1': (62.245,131.799,26.660)
O4': (61.727,130.905,25.687)
C5': (61.648,130.747,23.257)
P: (59.228,129.791,22.755)
O2: (63.518,132.723,28.879)
C4': (61.424,131.633,24.465)
C2': (62.248,133.194,26.033)
O2': (61.050,133.857,26.365)
N1: (63.600,131.363,27.048)
N3: (65.457,131.590,28.521)
N4: (67.386,130.427,28.114)
C6: (64.295,130.452,26.300)
C5: (65.551,130.107,26.617)
O3': (61.835,133.919,23.734)
OP1: (70.054,129.096,24.207)
OP2: (69.407,129.001,26.687)
C3': (65.830,126.228,24.195)
C1': (65.995,124.737,26.027)
C5': (68.371,126.466,24.004)
O6: (64.961,126.715,31.605)
O4': (67.290,124.893,25.467)
C8: (66.689,126.537,27.683)
C2: (63.659,124.066,29.634)
C6: (64.811,125.988,30.617)
C5: (65.469,126.056,29.359)
C4: (65.151,125.130,28.391)
P: (69.679,128.305,25.405)
C4': (67.192,125.545,24.172)
C2': (64.984,125.239,24.993)
O2': (64.556,124.131,24.228)
N1: (63.903,124.941,30.661)
N2: (62.746,123.110,29.873)
N3: (64.264,124.119,28.457)
N7: (66.436,126.938,28.900)
N9: (65.948,125.441,27.310)
O5': (68.375,127.454,25.059)
O3': (65.336,126.437,22.870)
OP2: (69.407,129.001,26.687)
C3': (65.830,126.228,24.195)
C1': (65.995,124.737,26.027)
C5': (68.371,126.466,24.004)
O6: (64.961,126.715,31.605)
O4': (67.290,124.893,25.467)
C8: (66.689,126.537,27.683)
C2: (63.659,124.066,29.634)
C6: (64.811,125.988,30.617)
C5: (65.469,126.056,29.359)
C4: (65.151,125.130,28.391)
P: (69.679,128.305,25.405)
C4': (67.192,125.545,24.172)
C2': (64.984,125.239,24.993)
O2': (64.556,124.131,24.228)
N1: (63.903,124.941,30.661)
N2: (62.746,123.110,29.873)
N3: (64.264,124.119,28.457)
N7: (66.436,126.938,28.900)
N9: (65.948,125.441,27.310)
O5': (68.375,127.454,25.059)
O3': (65.336,126.437,22.870)
Image (generated by PyMOL):