Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:032:0172
Extra
PDB:
ATOM 1 O3' G A 31 58.614 130.135 24.063 1.00 43.19 O
ATOM 2 P C A 32 59.362 129.578 22.755 1.00 43.35 P
ATOM 3 OP1 C A 32 59.303 130.713 21.799 1.00 44.55 O
ATOM 4 OP2 C A 32 58.838 128.247 22.346 1.00 43.15 O
ATOM 5 O5' C A 32 60.878 129.404 23.220 1.00 41.33 O
ATOM 6 C5' C A 32 61.795 130.521 23.186 1.00 39.80 C
ATOM 7 C4' C A 32 61.557 131.432 24.369 1.00 38.93 C
ATOM 8 O4' C A 32 61.827 130.713 25.600 1.00 38.34 O
ATOM 9 C3' C A 32 62.446 132.660 24.468 1.00 39.96 C
ATOM 10 O3' C A 32 61.957 133.720 23.645 1.00 44.90 O
ATOM 11 C2' C A 32 62.328 133.001 25.944 1.00 37.59 C
ATOM 12 O2' C A 32 61.093 133.623 26.216 1.00 36.24 O
ATOM 13 C1' C A 32 62.335 131.606 26.573 1.00 36.58 C
ATOM 14 N1 C A 32 63.684 131.154 26.964 1.00 35.81 N
ATOM 15 C2 C A 32 64.256 131.671 28.136 1.00 36.49 C
ATOM 16 O2 C A 32 63.588 132.449 28.842 1.00 35.68 O
ATOM 17 N3 C A 32 65.521 131.309 28.470 1.00 35.79 N
ATOM 18 C4 C A 32 66.200 130.462 27.693 1.00 36.43 C
ATOM 19 N4 C A 32 67.446 130.155 28.044 1.00 38.34 N
ATOM 20 C5 C A 32 65.631 129.897 26.517 1.00 35.89 C
ATOM 21 C6 C A 32 64.383 130.265 26.193 1.00 35.87 C
ATOM 22 P U A 33 62.981 134.808 23.038 1.00 45.27 P
ATOM 23 OP1 U A 33 62.192 135.682 22.135 1.00 43.95 O
ATOM 24 OP2 U A 33 64.179 134.101 22.517 1.00 45.16 O
ATOM 25 O5' U A 33 63.402 135.675 24.301 1.00 43.85 O
TER
ATOM 1 O3' A B 171 70.955 127.132 25.554 1.00 40.73 O
ATOM 2 P G B 172 69.709 128.139 25.365 1.00 41.61 P
ATOM 3 OP1 G B 172 69.957 128.872 24.102 1.00 43.60 O
ATOM 4 OP2 G B 172 69.448 128.902 26.612 1.00 37.78 O
ATOM 5 O5' G B 172 68.461 127.182 25.108 1.00 42.13 O
ATOM 6 C5' G B 172 68.451 126.225 24.025 1.00 38.25 C
ATOM 7 C4' G B 172 67.258 125.317 24.162 1.00 39.35 C
ATOM 8 O4' G B 172 67.325 124.651 25.450 1.00 39.06 O
ATOM 9 C3' G B 172 65.914 126.032 24.169 1.00 40.75 C
ATOM 10 O3' G B 172 65.444 126.227 22.841 1.00 42.73 O
ATOM 11 C2' G B 172 65.028 125.084 24.973 1.00 41.71 C
ATOM 12 O2' G B 172 64.495 124.011 24.221 1.00 41.92 O
ATOM 13 C1' G B 172 66.021 124.539 26.003 1.00 41.37 C
ATOM 14 N9 G B 172 66.001 125.243 27.283 1.00 42.77 N
ATOM 15 C8 G B 172 66.769 126.321 27.647 1.00 43.02 C
ATOM 16 N7 G B 172 66.552 126.714 28.872 1.00 43.92 N
ATOM 17 C5 G B 172 65.578 125.847 29.344 1.00 43.28 C
ATOM 18 C6 G B 172 64.956 125.771 30.611 1.00 42.85 C
ATOM 19 O6 G B 172 65.157 126.465 31.612 1.00 43.90 O
ATOM 20 N1 G B 172 64.020 124.754 30.657 1.00 42.44 N
ATOM 21 C2 G B 172 63.725 123.908 29.627 1.00 43.94 C
ATOM 22 N2 G B 172 62.780 122.993 29.868 1.00 44.91 N
ATOM 23 N3 G B 172 64.307 123.953 28.445 1.00 45.20 N
ATOM 24 C4 G B 172 65.217 124.943 28.373 1.00 43.69 C
ATOM 25 P G B 173 64.484 127.466 22.501 1.00 45.70 P
ATOM 26 OP1 G B 173 64.304 127.467 21.031 1.00 46.32 O
ATOM 27 OP2 G B 173 64.990 128.683 23.173 1.00 46.68 O
ATOM 28 O5' G B 173 63.106 127.079 23.185 1.00 47.01 O
TER
ATOM 2 P C A 32 59.362 129.578 22.755 1.00 43.35 P
ATOM 3 OP1 C A 32 59.303 130.713 21.799 1.00 44.55 O
ATOM 4 OP2 C A 32 58.838 128.247 22.346 1.00 43.15 O
ATOM 5 O5' C A 32 60.878 129.404 23.220 1.00 41.33 O
ATOM 6 C5' C A 32 61.795 130.521 23.186 1.00 39.80 C
ATOM 7 C4' C A 32 61.557 131.432 24.369 1.00 38.93 C
ATOM 8 O4' C A 32 61.827 130.713 25.600 1.00 38.34 O
ATOM 9 C3' C A 32 62.446 132.660 24.468 1.00 39.96 C
ATOM 10 O3' C A 32 61.957 133.720 23.645 1.00 44.90 O
ATOM 11 C2' C A 32 62.328 133.001 25.944 1.00 37.59 C
ATOM 12 O2' C A 32 61.093 133.623 26.216 1.00 36.24 O
ATOM 13 C1' C A 32 62.335 131.606 26.573 1.00 36.58 C
ATOM 14 N1 C A 32 63.684 131.154 26.964 1.00 35.81 N
ATOM 15 C2 C A 32 64.256 131.671 28.136 1.00 36.49 C
ATOM 16 O2 C A 32 63.588 132.449 28.842 1.00 35.68 O
ATOM 17 N3 C A 32 65.521 131.309 28.470 1.00 35.79 N
ATOM 18 C4 C A 32 66.200 130.462 27.693 1.00 36.43 C
ATOM 19 N4 C A 32 67.446 130.155 28.044 1.00 38.34 N
ATOM 20 C5 C A 32 65.631 129.897 26.517 1.00 35.89 C
ATOM 21 C6 C A 32 64.383 130.265 26.193 1.00 35.87 C
ATOM 22 P U A 33 62.981 134.808 23.038 1.00 45.27 P
ATOM 23 OP1 U A 33 62.192 135.682 22.135 1.00 43.95 O
ATOM 24 OP2 U A 33 64.179 134.101 22.517 1.00 45.16 O
ATOM 25 O5' U A 33 63.402 135.675 24.301 1.00 43.85 O
TER
ATOM 1 O3' A B 171 70.955 127.132 25.554 1.00 40.73 O
ATOM 2 P G B 172 69.709 128.139 25.365 1.00 41.61 P
ATOM 3 OP1 G B 172 69.957 128.872 24.102 1.00 43.60 O
ATOM 4 OP2 G B 172 69.448 128.902 26.612 1.00 37.78 O
ATOM 5 O5' G B 172 68.461 127.182 25.108 1.00 42.13 O
ATOM 6 C5' G B 172 68.451 126.225 24.025 1.00 38.25 C
ATOM 7 C4' G B 172 67.258 125.317 24.162 1.00 39.35 C
ATOM 8 O4' G B 172 67.325 124.651 25.450 1.00 39.06 O
ATOM 9 C3' G B 172 65.914 126.032 24.169 1.00 40.75 C
ATOM 10 O3' G B 172 65.444 126.227 22.841 1.00 42.73 O
ATOM 11 C2' G B 172 65.028 125.084 24.973 1.00 41.71 C
ATOM 12 O2' G B 172 64.495 124.011 24.221 1.00 41.92 O
ATOM 13 C1' G B 172 66.021 124.539 26.003 1.00 41.37 C
ATOM 14 N9 G B 172 66.001 125.243 27.283 1.00 42.77 N
ATOM 15 C8 G B 172 66.769 126.321 27.647 1.00 43.02 C
ATOM 16 N7 G B 172 66.552 126.714 28.872 1.00 43.92 N
ATOM 17 C5 G B 172 65.578 125.847 29.344 1.00 43.28 C
ATOM 18 C6 G B 172 64.956 125.771 30.611 1.00 42.85 C
ATOM 19 O6 G B 172 65.157 126.465 31.612 1.00 43.90 O
ATOM 20 N1 G B 172 64.020 124.754 30.657 1.00 42.44 N
ATOM 21 C2 G B 172 63.725 123.908 29.627 1.00 43.94 C
ATOM 22 N2 G B 172 62.780 122.993 29.868 1.00 44.91 N
ATOM 23 N3 G B 172 64.307 123.953 28.445 1.00 45.20 N
ATOM 24 C4 G B 172 65.217 124.943 28.373 1.00 43.69 C
ATOM 25 P G B 173 64.484 127.466 22.501 1.00 45.70 P
ATOM 26 OP1 G B 173 64.304 127.467 21.031 1.00 46.32 O
ATOM 27 OP2 G B 173 64.990 128.683 23.173 1.00 46.68 O
ATOM 28 O5' G B 173 63.106 127.079 23.185 1.00 47.01 O
TER
Atoms:
C2: (64.256,131.671,28.136)
OP1: (59.303,130.713,21.799)
OP2: (58.838,128.247,22.346)
C4: (66.200,130.462,27.693)
O5': (60.878,129.404,23.220)
C3': (62.446,132.660,24.468)
C1': (62.335,131.606,26.573)
O4': (61.827,130.713,25.600)
C5': (61.795,130.521,23.186)
P: (59.362,129.578,22.755)
O2: (63.588,132.449,28.842)
C4': (61.557,131.432,24.369)
C2': (62.328,133.001,25.944)
O2': (61.093,133.623,26.216)
N1: (63.684,131.154,26.964)
N3: (65.521,131.309,28.470)
N4: (67.446,130.155,28.044)
C6: (64.383,130.265,26.193)
C5: (65.631,129.897,26.517)
O3': (61.957,133.720,23.645)
OP1: (59.303,130.713,21.799)
OP2: (58.838,128.247,22.346)
C4: (66.200,130.462,27.693)
O5': (60.878,129.404,23.220)
C3': (62.446,132.660,24.468)
C1': (62.335,131.606,26.573)
O4': (61.827,130.713,25.600)
C5': (61.795,130.521,23.186)
P: (59.362,129.578,22.755)
O2: (63.588,132.449,28.842)
C4': (61.557,131.432,24.369)
C2': (62.328,133.001,25.944)
O2': (61.093,133.623,26.216)
N1: (63.684,131.154,26.964)
N3: (65.521,131.309,28.470)
N4: (67.446,130.155,28.044)
C6: (64.383,130.265,26.193)
C5: (65.631,129.897,26.517)
O3': (61.957,133.720,23.645)
OP1: (69.957,128.872,24.102)
OP2: (69.448,128.902,26.612)
C3': (65.914,126.032,24.169)
C1': (66.021,124.539,26.003)
C5': (68.451,126.225,24.025)
O6: (65.157,126.465,31.612)
O4': (67.325,124.651,25.450)
C8: (66.769,126.321,27.647)
C2: (63.725,123.908,29.627)
C6: (64.956,125.771,30.611)
C5: (65.578,125.847,29.344)
C4: (65.217,124.943,28.373)
P: (69.709,128.139,25.365)
C4': (67.258,125.317,24.162)
C2': (65.028,125.084,24.973)
O2': (64.495,124.011,24.221)
N1: (64.020,124.754,30.657)
N2: (62.780,122.993,29.868)
N3: (64.307,123.953,28.445)
N7: (66.552,126.714,28.872)
N9: (66.001,125.243,27.283)
O5': (68.461,127.182,25.108)
O3': (65.444,126.227,22.841)
OP2: (69.448,128.902,26.612)
C3': (65.914,126.032,24.169)
C1': (66.021,124.539,26.003)
C5': (68.451,126.225,24.025)
O6: (65.157,126.465,31.612)
O4': (67.325,124.651,25.450)
C8: (66.769,126.321,27.647)
C2: (63.725,123.908,29.627)
C6: (64.956,125.771,30.611)
C5: (65.578,125.847,29.344)
C4: (65.217,124.943,28.373)
P: (69.709,128.139,25.365)
C4': (67.258,125.317,24.162)
C2': (65.028,125.084,24.973)
O2': (64.495,124.011,24.221)
N1: (64.020,124.754,30.657)
N2: (62.780,122.993,29.868)
N3: (64.307,123.953,28.445)
N7: (66.552,126.714,28.872)
N9: (66.001,125.243,27.283)
O5': (68.461,127.182,25.108)
O3': (65.444,126.227,22.841)
Image (generated by PyMOL):