Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01197:01200
Extra
PDB:
ATOM 1 O3' U A1196 39.440 111.703 126.564 1.00 48.42 O
ATOM 2 P C A1197 39.899 110.202 126.221 1.00 47.21 P
ATOM 3 OP1 C A1197 40.392 109.619 127.491 1.00 47.35 O
ATOM 4 OP2 C A1197 40.772 110.191 125.023 1.00 47.73 O
ATOM 5 O5' C A1197 38.543 109.461 125.831 1.00 49.72 O
ATOM 6 C5' C A1197 38.013 109.506 124.481 1.00 47.50 C
ATOM 7 C4' C A1197 36.916 108.476 124.329 1.00 46.42 C
ATOM 8 O4' C A1197 36.071 108.538 125.502 1.00 45.91 O
ATOM 9 C3' C A1197 35.985 108.669 123.139 1.00 46.15 C
ATOM 10 O3' C A1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 11 C2' C A1197 34.671 108.064 123.634 1.00 44.63 C
ATOM 12 O2' C A1197 34.599 106.662 123.495 1.00 45.66 O
ATOM 13 C1' C A1197 34.717 108.390 125.127 1.00 43.96 C
ATOM 14 N1 C A1197 33.987 109.607 125.512 1.00 42.20 N
ATOM 15 C2 C A1197 32.617 109.517 125.712 1.00 42.24 C
ATOM 16 O2 C A1197 32.064 108.424 125.549 1.00 43.86 O
ATOM 17 N3 C A1197 31.925 110.617 126.074 1.00 42.34 N
ATOM 18 C4 C A1197 32.561 111.778 126.232 1.00 42.58 C
ATOM 19 N4 C A1197 31.835 112.843 126.597 1.00 43.75 N
ATOM 20 C5 C A1197 33.966 111.901 126.027 1.00 39.87 C
ATOM 21 C6 C A1197 34.632 110.803 125.673 1.00 40.23 C
ATOM 22 P G A1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 23 OP1 G A1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 24 OP2 G A1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 25 O5' G A1198 36.093 110.026 120.514 1.00 44.42 O
TER
ATOM 1 O3' G B1199 33.107 117.270 124.898 1.00 40.97 O
ATOM 2 P G B1200 32.830 116.961 126.447 1.00 41.02 P
ATOM 3 OP1 G B1200 33.608 117.947 127.237 1.00 41.73 O
ATOM 4 OP2 G B1200 33.016 115.517 126.689 1.00 38.28 O
ATOM 5 O5' G B1200 31.281 117.279 126.633 1.00 41.79 O
ATOM 6 C5' G B1200 30.774 118.620 126.500 1.00 42.00 C
ATOM 7 C4' G B1200 29.265 118.627 126.629 1.00 43.70 C
ATOM 8 O4' G B1200 28.719 117.615 125.738 1.00 43.10 O
ATOM 9 C3' G B1200 28.687 118.261 127.991 1.00 43.49 C
ATOM 10 O3' G B1200 28.656 119.386 128.880 1.00 44.15 O
ATOM 11 C2' G B1200 27.280 117.812 127.616 1.00 42.51 C
ATOM 12 O2' G B1200 26.442 118.905 127.339 1.00 40.46 O
ATOM 13 C1' G B1200 27.534 117.083 126.297 1.00 43.43 C
ATOM 14 N9 G B1200 27.684 115.638 126.422 1.00 45.23 N
ATOM 15 C8 G B1200 28.840 114.909 126.318 1.00 47.01 C
ATOM 16 N7 G B1200 28.645 113.624 126.428 1.00 48.54 N
ATOM 17 C5 G B1200 27.279 113.501 126.624 1.00 48.32 C
ATOM 18 C6 G B1200 26.477 112.346 126.787 1.00 50.45 C
ATOM 19 O6 G B1200 26.818 111.159 126.777 1.00 52.45 O
ATOM 20 N1 G B1200 25.143 112.675 126.966 1.00 50.60 N
ATOM 21 C2 G B1200 24.645 113.948 126.983 1.00 50.51 C
ATOM 22 N2 G B1200 23.330 114.058 127.190 1.00 51.00 N
ATOM 23 N3 G B1200 25.378 115.032 126.816 1.00 49.27 N
ATOM 24 C4 G B1200 26.677 114.735 126.642 1.00 47.20 C
ATOM 25 P A B1201 29.514 119.364 130.247 1.00 43.28 P
ATOM 26 OP1 A B1201 29.177 120.602 130.971 1.00 43.71 O
ATOM 27 OP2 A B1201 30.924 119.085 129.915 1.00 44.89 O
ATOM 28 O5' A B1201 28.977 118.105 131.068 1.00 42.90 O
TER
ATOM 2 P C A1197 39.899 110.202 126.221 1.00 47.21 P
ATOM 3 OP1 C A1197 40.392 109.619 127.491 1.00 47.35 O
ATOM 4 OP2 C A1197 40.772 110.191 125.023 1.00 47.73 O
ATOM 5 O5' C A1197 38.543 109.461 125.831 1.00 49.72 O
ATOM 6 C5' C A1197 38.013 109.506 124.481 1.00 47.50 C
ATOM 7 C4' C A1197 36.916 108.476 124.329 1.00 46.42 C
ATOM 8 O4' C A1197 36.071 108.538 125.502 1.00 45.91 O
ATOM 9 C3' C A1197 35.985 108.669 123.139 1.00 46.15 C
ATOM 10 O3' C A1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 11 C2' C A1197 34.671 108.064 123.634 1.00 44.63 C
ATOM 12 O2' C A1197 34.599 106.662 123.495 1.00 45.66 O
ATOM 13 C1' C A1197 34.717 108.390 125.127 1.00 43.96 C
ATOM 14 N1 C A1197 33.987 109.607 125.512 1.00 42.20 N
ATOM 15 C2 C A1197 32.617 109.517 125.712 1.00 42.24 C
ATOM 16 O2 C A1197 32.064 108.424 125.549 1.00 43.86 O
ATOM 17 N3 C A1197 31.925 110.617 126.074 1.00 42.34 N
ATOM 18 C4 C A1197 32.561 111.778 126.232 1.00 42.58 C
ATOM 19 N4 C A1197 31.835 112.843 126.597 1.00 43.75 N
ATOM 20 C5 C A1197 33.966 111.901 126.027 1.00 39.87 C
ATOM 21 C6 C A1197 34.632 110.803 125.673 1.00 40.23 C
ATOM 22 P G A1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 23 OP1 G A1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 24 OP2 G A1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 25 O5' G A1198 36.093 110.026 120.514 1.00 44.42 O
TER
ATOM 1 O3' G B1199 33.107 117.270 124.898 1.00 40.97 O
ATOM 2 P G B1200 32.830 116.961 126.447 1.00 41.02 P
ATOM 3 OP1 G B1200 33.608 117.947 127.237 1.00 41.73 O
ATOM 4 OP2 G B1200 33.016 115.517 126.689 1.00 38.28 O
ATOM 5 O5' G B1200 31.281 117.279 126.633 1.00 41.79 O
ATOM 6 C5' G B1200 30.774 118.620 126.500 1.00 42.00 C
ATOM 7 C4' G B1200 29.265 118.627 126.629 1.00 43.70 C
ATOM 8 O4' G B1200 28.719 117.615 125.738 1.00 43.10 O
ATOM 9 C3' G B1200 28.687 118.261 127.991 1.00 43.49 C
ATOM 10 O3' G B1200 28.656 119.386 128.880 1.00 44.15 O
ATOM 11 C2' G B1200 27.280 117.812 127.616 1.00 42.51 C
ATOM 12 O2' G B1200 26.442 118.905 127.339 1.00 40.46 O
ATOM 13 C1' G B1200 27.534 117.083 126.297 1.00 43.43 C
ATOM 14 N9 G B1200 27.684 115.638 126.422 1.00 45.23 N
ATOM 15 C8 G B1200 28.840 114.909 126.318 1.00 47.01 C
ATOM 16 N7 G B1200 28.645 113.624 126.428 1.00 48.54 N
ATOM 17 C5 G B1200 27.279 113.501 126.624 1.00 48.32 C
ATOM 18 C6 G B1200 26.477 112.346 126.787 1.00 50.45 C
ATOM 19 O6 G B1200 26.818 111.159 126.777 1.00 52.45 O
ATOM 20 N1 G B1200 25.143 112.675 126.966 1.00 50.60 N
ATOM 21 C2 G B1200 24.645 113.948 126.983 1.00 50.51 C
ATOM 22 N2 G B1200 23.330 114.058 127.190 1.00 51.00 N
ATOM 23 N3 G B1200 25.378 115.032 126.816 1.00 49.27 N
ATOM 24 C4 G B1200 26.677 114.735 126.642 1.00 47.20 C
ATOM 25 P A B1201 29.514 119.364 130.247 1.00 43.28 P
ATOM 26 OP1 A B1201 29.177 120.602 130.971 1.00 43.71 O
ATOM 27 OP2 A B1201 30.924 119.085 129.915 1.00 44.89 O
ATOM 28 O5' A B1201 28.977 118.105 131.068 1.00 42.90 O
TER
Atoms:
C2: (32.617,109.517,125.712)
OP1: (40.392,109.619,127.491)
OP2: (40.772,110.191,125.023)
C4: (32.561,111.778,126.232)
O5': (38.543,109.461,125.831)
C3': (35.985,108.669,123.139)
C1': (34.717,108.390,125.127)
O4': (36.071,108.538,125.502)
C5': (38.013,109.506,124.481)
P: (39.899,110.202,126.221)
O2: (32.064,108.424,125.549)
C4': (36.916,108.476,124.329)
C2': (34.671,108.064,123.634)
O2': (34.599,106.662,123.495)
N1: (33.987,109.607,125.512)
N3: (31.925,110.617,126.074)
N4: (31.835,112.843,126.597)
C6: (34.632,110.803,125.673)
C5: (33.966,111.901,126.027)
O3': (36.461,107.971,121.979)
OP1: (40.392,109.619,127.491)
OP2: (40.772,110.191,125.023)
C4: (32.561,111.778,126.232)
O5': (38.543,109.461,125.831)
C3': (35.985,108.669,123.139)
C1': (34.717,108.390,125.127)
O4': (36.071,108.538,125.502)
C5': (38.013,109.506,124.481)
P: (39.899,110.202,126.221)
O2: (32.064,108.424,125.549)
C4': (36.916,108.476,124.329)
C2': (34.671,108.064,123.634)
O2': (34.599,106.662,123.495)
N1: (33.987,109.607,125.512)
N3: (31.925,110.617,126.074)
N4: (31.835,112.843,126.597)
C6: (34.632,110.803,125.673)
C5: (33.966,111.901,126.027)
O3': (36.461,107.971,121.979)
OP1: (33.608,117.947,127.237)
OP2: (33.016,115.517,126.689)
C3': (28.687,118.261,127.991)
C1': (27.534,117.083,126.297)
C5': (30.774,118.620,126.500)
O6: (26.818,111.159,126.777)
O4': (28.719,117.615,125.738)
C8: (28.840,114.909,126.318)
C2: (24.645,113.948,126.983)
C6: (26.477,112.346,126.787)
C5: (27.279,113.501,126.624)
C4: (26.677,114.735,126.642)
P: (32.830,116.961,126.447)
C4': (29.265,118.627,126.629)
C2': (27.280,117.812,127.616)
O2': (26.442,118.905,127.339)
N1: (25.143,112.675,126.966)
N2: (23.330,114.058,127.190)
N3: (25.378,115.032,126.816)
N7: (28.645,113.624,126.428)
N9: (27.684,115.638,126.422)
O5': (31.281,117.279,126.633)
O3': (28.656,119.386,128.880)
OP2: (33.016,115.517,126.689)
C3': (28.687,118.261,127.991)
C1': (27.534,117.083,126.297)
C5': (30.774,118.620,126.500)
O6: (26.818,111.159,126.777)
O4': (28.719,117.615,125.738)
C8: (28.840,114.909,126.318)
C2: (24.645,113.948,126.983)
C6: (26.477,112.346,126.787)
C5: (27.279,113.501,126.624)
C4: (26.677,114.735,126.642)
P: (32.830,116.961,126.447)
C4': (29.265,118.627,126.629)
C2': (27.280,117.812,127.616)
O2': (26.442,118.905,127.339)
N1: (25.143,112.675,126.966)
N2: (23.330,114.058,127.190)
N3: (25.378,115.032,126.816)
N7: (28.645,113.624,126.428)
N9: (27.684,115.638,126.422)
O5': (31.281,117.279,126.633)
O3': (28.656,119.386,128.880)
Image (generated by PyMOL):