Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:032:0172
Extra
PDB:
ATOM 1 O3' G A 31 58.812 130.572 24.308 1.00 56.51 O
ATOM 2 P C A 32 59.593 130.021 23.011 1.00 54.93 P
ATOM 3 OP1 C A 32 59.579 131.172 22.079 1.00 54.62 O
ATOM 4 OP2 C A 32 59.045 128.713 22.569 1.00 54.80 O
ATOM 5 O5' C A 32 61.093 129.811 23.513 1.00 53.66 O
ATOM 6 C5' C A 32 62.042 130.915 23.510 1.00 51.35 C
ATOM 7 C4' C A 32 61.828 131.808 24.717 1.00 48.72 C
ATOM 8 O4' C A 32 62.126 131.072 25.933 1.00 46.81 O
ATOM 9 C3' C A 32 62.721 133.033 24.818 1.00 48.81 C
ATOM 10 O3' C A 32 62.244 134.114 24.019 1.00 52.22 O
ATOM 11 C2' C A 32 62.636 133.360 26.300 1.00 47.82 C
ATOM 12 O2' C A 32 61.439 134.028 26.638 1.00 47.72 O
ATOM 13 C1' C A 32 62.638 131.957 26.915 1.00 46.40 C
ATOM 14 N1 C A 32 63.992 131.514 27.300 1.00 45.17 N
ATOM 15 C2 C A 32 64.589 132.074 28.439 1.00 45.87 C
ATOM 16 O2 C A 32 63.943 132.886 29.128 1.00 46.50 O
ATOM 17 N3 C A 32 65.849 131.718 28.764 1.00 45.81 N
ATOM 18 C4 C A 32 66.508 130.840 28.014 1.00 46.39 C
ATOM 19 N4 C A 32 67.757 130.541 28.363 1.00 48.59 N
ATOM 20 C5 C A 32 65.919 130.234 26.872 1.00 46.26 C
ATOM 21 C6 C A 32 64.671 130.593 26.556 1.00 44.74 C
ATOM 22 P U A 33 63.282 135.190 23.418 1.00 53.39 P
ATOM 23 OP1 U A 33 62.517 136.029 22.457 1.00 50.93 O
ATOM 24 OP2 U A 33 64.520 134.493 22.967 1.00 53.70 O
ATOM 25 O5' U A 33 63.672 136.086 24.671 1.00 51.72 O
TER
ATOM 1 O3' A B 171 71.253 127.509 25.881 1.00 55.68 O
ATOM 2 P G B 172 69.996 128.494 25.687 1.00 57.20 P
ATOM 3 OP1 G B 172 70.237 129.216 24.413 1.00 57.70 O
ATOM 4 OP2 G B 172 69.764 129.266 26.936 1.00 53.86 O
ATOM 5 O5' G B 172 68.755 127.513 25.470 1.00 56.89 O
ATOM 6 C5' G B 172 68.731 126.559 24.378 1.00 54.80 C
ATOM 7 C4' G B 172 67.518 125.670 24.493 1.00 55.01 C
ATOM 8 O4' G B 172 67.555 124.977 25.773 1.00 55.65 O
ATOM 9 C3' G B 172 66.181 126.397 24.494 1.00 55.13 C
ATOM 10 O3' G B 172 65.731 126.644 23.165 1.00 55.34 O
ATOM 11 C2' G B 172 65.280 125.424 25.245 1.00 55.31 C
ATOM 12 O2' G B 172 64.840 124.359 24.434 1.00 54.72 O
ATOM 13 C1' G B 172 66.240 124.875 26.304 1.00 55.99 C
ATOM 14 N9 G B 172 66.200 125.593 27.580 1.00 58.33 N
ATOM 15 C8 G B 172 66.931 126.706 27.926 1.00 58.62 C
ATOM 16 N7 G B 172 66.711 127.106 29.149 1.00 58.44 N
ATOM 17 C5 G B 172 65.775 126.209 29.644 1.00 58.57 C
ATOM 18 C6 G B 172 65.170 126.127 30.921 1.00 58.29 C
ATOM 19 O6 G B 172 65.361 126.839 31.915 1.00 58.59 O
ATOM 20 N1 G B 172 64.268 125.080 30.989 1.00 57.56 N
ATOM 21 C2 G B 172 63.992 124.212 29.973 1.00 58.50 C
ATOM 22 N2 G B 172 63.086 123.269 30.241 1.00 59.30 N
ATOM 23 N3 G B 172 64.558 124.261 28.784 1.00 59.43 N
ATOM 24 C4 G B 172 65.434 125.279 28.686 1.00 58.87 C
ATOM 25 P G B 173 64.694 127.841 22.869 1.00 57.29 P
ATOM 26 OP1 G B 173 64.803 128.130 21.418 1.00 58.80 O
ATOM 27 OP2 G B 173 64.901 128.931 23.844 1.00 57.71 O
ATOM 28 O5' G B 173 63.255 127.204 23.126 1.00 58.72 O
TER
ATOM 2 P C A 32 59.593 130.021 23.011 1.00 54.93 P
ATOM 3 OP1 C A 32 59.579 131.172 22.079 1.00 54.62 O
ATOM 4 OP2 C A 32 59.045 128.713 22.569 1.00 54.80 O
ATOM 5 O5' C A 32 61.093 129.811 23.513 1.00 53.66 O
ATOM 6 C5' C A 32 62.042 130.915 23.510 1.00 51.35 C
ATOM 7 C4' C A 32 61.828 131.808 24.717 1.00 48.72 C
ATOM 8 O4' C A 32 62.126 131.072 25.933 1.00 46.81 O
ATOM 9 C3' C A 32 62.721 133.033 24.818 1.00 48.81 C
ATOM 10 O3' C A 32 62.244 134.114 24.019 1.00 52.22 O
ATOM 11 C2' C A 32 62.636 133.360 26.300 1.00 47.82 C
ATOM 12 O2' C A 32 61.439 134.028 26.638 1.00 47.72 O
ATOM 13 C1' C A 32 62.638 131.957 26.915 1.00 46.40 C
ATOM 14 N1 C A 32 63.992 131.514 27.300 1.00 45.17 N
ATOM 15 C2 C A 32 64.589 132.074 28.439 1.00 45.87 C
ATOM 16 O2 C A 32 63.943 132.886 29.128 1.00 46.50 O
ATOM 17 N3 C A 32 65.849 131.718 28.764 1.00 45.81 N
ATOM 18 C4 C A 32 66.508 130.840 28.014 1.00 46.39 C
ATOM 19 N4 C A 32 67.757 130.541 28.363 1.00 48.59 N
ATOM 20 C5 C A 32 65.919 130.234 26.872 1.00 46.26 C
ATOM 21 C6 C A 32 64.671 130.593 26.556 1.00 44.74 C
ATOM 22 P U A 33 63.282 135.190 23.418 1.00 53.39 P
ATOM 23 OP1 U A 33 62.517 136.029 22.457 1.00 50.93 O
ATOM 24 OP2 U A 33 64.520 134.493 22.967 1.00 53.70 O
ATOM 25 O5' U A 33 63.672 136.086 24.671 1.00 51.72 O
TER
ATOM 1 O3' A B 171 71.253 127.509 25.881 1.00 55.68 O
ATOM 2 P G B 172 69.996 128.494 25.687 1.00 57.20 P
ATOM 3 OP1 G B 172 70.237 129.216 24.413 1.00 57.70 O
ATOM 4 OP2 G B 172 69.764 129.266 26.936 1.00 53.86 O
ATOM 5 O5' G B 172 68.755 127.513 25.470 1.00 56.89 O
ATOM 6 C5' G B 172 68.731 126.559 24.378 1.00 54.80 C
ATOM 7 C4' G B 172 67.518 125.670 24.493 1.00 55.01 C
ATOM 8 O4' G B 172 67.555 124.977 25.773 1.00 55.65 O
ATOM 9 C3' G B 172 66.181 126.397 24.494 1.00 55.13 C
ATOM 10 O3' G B 172 65.731 126.644 23.165 1.00 55.34 O
ATOM 11 C2' G B 172 65.280 125.424 25.245 1.00 55.31 C
ATOM 12 O2' G B 172 64.840 124.359 24.434 1.00 54.72 O
ATOM 13 C1' G B 172 66.240 124.875 26.304 1.00 55.99 C
ATOM 14 N9 G B 172 66.200 125.593 27.580 1.00 58.33 N
ATOM 15 C8 G B 172 66.931 126.706 27.926 1.00 58.62 C
ATOM 16 N7 G B 172 66.711 127.106 29.149 1.00 58.44 N
ATOM 17 C5 G B 172 65.775 126.209 29.644 1.00 58.57 C
ATOM 18 C6 G B 172 65.170 126.127 30.921 1.00 58.29 C
ATOM 19 O6 G B 172 65.361 126.839 31.915 1.00 58.59 O
ATOM 20 N1 G B 172 64.268 125.080 30.989 1.00 57.56 N
ATOM 21 C2 G B 172 63.992 124.212 29.973 1.00 58.50 C
ATOM 22 N2 G B 172 63.086 123.269 30.241 1.00 59.30 N
ATOM 23 N3 G B 172 64.558 124.261 28.784 1.00 59.43 N
ATOM 24 C4 G B 172 65.434 125.279 28.686 1.00 58.87 C
ATOM 25 P G B 173 64.694 127.841 22.869 1.00 57.29 P
ATOM 26 OP1 G B 173 64.803 128.130 21.418 1.00 58.80 O
ATOM 27 OP2 G B 173 64.901 128.931 23.844 1.00 57.71 O
ATOM 28 O5' G B 173 63.255 127.204 23.126 1.00 58.72 O
TER
Atoms:
C2: (64.589,132.074,28.439)
OP1: (59.579,131.172,22.079)
OP2: (59.045,128.713,22.569)
C4: (66.508,130.840,28.014)
O5': (61.093,129.811,23.513)
C3': (62.721,133.033,24.818)
C1': (62.638,131.957,26.915)
O4': (62.126,131.072,25.933)
C5': (62.042,130.915,23.510)
P: (59.593,130.021,23.011)
O2: (63.943,132.886,29.128)
C4': (61.828,131.808,24.717)
C2': (62.636,133.360,26.300)
O2': (61.439,134.028,26.638)
N1: (63.992,131.514,27.300)
N3: (65.849,131.718,28.764)
N4: (67.757,130.541,28.363)
C6: (64.671,130.593,26.556)
C5: (65.919,130.234,26.872)
O3': (62.244,134.114,24.019)
OP1: (59.579,131.172,22.079)
OP2: (59.045,128.713,22.569)
C4: (66.508,130.840,28.014)
O5': (61.093,129.811,23.513)
C3': (62.721,133.033,24.818)
C1': (62.638,131.957,26.915)
O4': (62.126,131.072,25.933)
C5': (62.042,130.915,23.510)
P: (59.593,130.021,23.011)
O2: (63.943,132.886,29.128)
C4': (61.828,131.808,24.717)
C2': (62.636,133.360,26.300)
O2': (61.439,134.028,26.638)
N1: (63.992,131.514,27.300)
N3: (65.849,131.718,28.764)
N4: (67.757,130.541,28.363)
C6: (64.671,130.593,26.556)
C5: (65.919,130.234,26.872)
O3': (62.244,134.114,24.019)
OP1: (70.237,129.216,24.413)
OP2: (69.764,129.266,26.936)
C3': (66.181,126.397,24.494)
C1': (66.240,124.875,26.304)
C5': (68.731,126.559,24.378)
O6: (65.361,126.839,31.915)
O4': (67.555,124.977,25.773)
C8: (66.931,126.706,27.926)
C2: (63.992,124.212,29.973)
C6: (65.170,126.127,30.921)
C5: (65.775,126.209,29.644)
C4: (65.434,125.279,28.686)
P: (69.996,128.494,25.687)
C4': (67.518,125.670,24.493)
C2': (65.280,125.424,25.245)
O2': (64.840,124.359,24.434)
N1: (64.268,125.080,30.989)
N2: (63.086,123.269,30.241)
N3: (64.558,124.261,28.784)
N7: (66.711,127.106,29.149)
N9: (66.200,125.593,27.580)
O5': (68.755,127.513,25.470)
O3': (65.731,126.644,23.165)
OP2: (69.764,129.266,26.936)
C3': (66.181,126.397,24.494)
C1': (66.240,124.875,26.304)
C5': (68.731,126.559,24.378)
O6: (65.361,126.839,31.915)
O4': (67.555,124.977,25.773)
C8: (66.931,126.706,27.926)
C2: (63.992,124.212,29.973)
C6: (65.170,126.127,30.921)
C5: (65.775,126.209,29.644)
C4: (65.434,125.279,28.686)
P: (69.996,128.494,25.687)
C4': (67.518,125.670,24.493)
C2': (65.280,125.424,25.245)
O2': (64.840,124.359,24.434)
N1: (64.268,125.080,30.989)
N2: (63.086,123.269,30.241)
N3: (64.558,124.261,28.784)
N7: (66.711,127.106,29.149)
N9: (66.200,125.593,27.580)
O5': (68.755,127.513,25.470)
O3': (65.731,126.644,23.165)
Image (generated by PyMOL):