Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01197:01200
Extra
PDB:
ATOM 1 O3' U A1196 39.285 111.562 126.127 1.00 44.07 O
ATOM 2 P C A1197 39.775 110.075 125.793 1.00 43.34 P
ATOM 3 OP1 C A1197 40.239 109.497 127.073 1.00 43.32 O
ATOM 4 OP2 C A1197 40.678 110.074 124.618 1.00 44.93 O
ATOM 5 O5' C A1197 38.443 109.314 125.387 1.00 43.71 O
ATOM 6 C5' C A1197 37.940 109.327 124.041 1.00 42.13 C
ATOM 7 C4' C A1197 36.817 108.330 123.934 1.00 44.00 C
ATOM 8 O4' C A1197 35.988 108.469 125.115 1.00 44.03 O
ATOM 9 C3' C A1197 35.873 108.482 122.752 1.00 45.05 C
ATOM 10 O3' C A1197 36.348 107.764 121.604 1.00 45.49 O
ATOM 11 C2' C A1197 34.581 107.866 123.292 1.00 44.62 C
ATOM 12 O2' C A1197 34.565 106.450 123.203 1.00 43.99 O
ATOM 13 C1' C A1197 34.632 108.274 124.773 1.00 43.49 C
ATOM 14 N1 C A1197 33.878 109.491 125.137 1.00 41.66 N
ATOM 15 C2 C A1197 32.499 109.392 125.349 1.00 42.76 C
ATOM 16 O2 C A1197 31.951 108.287 125.243 1.00 45.04 O
ATOM 17 N3 C A1197 31.795 110.502 125.661 1.00 42.49 N
ATOM 18 C4 C A1197 32.415 111.675 125.765 1.00 42.24 C
ATOM 19 N4 C A1197 31.673 112.746 126.053 1.00 42.21 N
ATOM 20 C5 C A1197 33.822 111.803 125.572 1.00 40.92 C
ATOM 21 C6 C A1197 34.506 110.697 125.262 1.00 40.38 C
ATOM 22 P G A1198 36.891 108.558 120.307 1.00 45.69 P
ATOM 23 OP1 G A1198 36.728 107.650 119.137 1.00 45.22 O
ATOM 24 OP2 G A1198 38.235 109.101 120.639 1.00 45.27 O
ATOM 25 O5' G A1198 35.904 109.794 120.114 1.00 44.21 O
TER
ATOM 1 O3' G B1199 32.877 117.147 124.442 1.00 38.64 O
ATOM 2 P G B1200 32.587 116.864 125.994 1.00 38.39 P
ATOM 3 OP1 G B1200 33.318 117.881 126.790 1.00 36.52 O
ATOM 4 OP2 G B1200 32.811 115.423 126.259 1.00 35.17 O
ATOM 5 O5' G B1200 31.031 117.164 126.125 1.00 38.68 O
ATOM 6 C5' G B1200 30.518 118.503 125.949 1.00 40.45 C
ATOM 7 C4' G B1200 29.021 118.524 126.173 1.00 41.51 C
ATOM 8 O4' G B1200 28.415 117.568 125.269 1.00 40.12 O
ATOM 9 C3' G B1200 28.540 118.093 127.555 1.00 41.59 C
ATOM 10 O3' G B1200 28.525 119.188 128.474 1.00 40.91 O
ATOM 11 C2' G B1200 27.126 117.621 127.262 1.00 40.71 C
ATOM 12 O2' G B1200 26.241 118.704 127.121 1.00 43.07 O
ATOM 13 C1' G B1200 27.301 116.970 125.891 1.00 40.90 C
ATOM 14 N9 G B1200 27.524 115.533 125.951 1.00 42.28 N
ATOM 15 C8 G B1200 28.708 114.857 125.801 1.00 43.30 C
ATOM 16 N7 G B1200 28.570 113.564 125.890 1.00 45.16 N
ATOM 17 C5 G B1200 27.215 113.381 126.112 1.00 45.44 C
ATOM 18 C6 G B1200 26.467 112.198 126.283 1.00 47.62 C
ATOM 19 O6 G B1200 26.857 111.029 126.249 1.00 50.84 O
ATOM 20 N1 G B1200 25.126 112.472 126.508 1.00 48.70 N
ATOM 21 C2 G B1200 24.573 113.725 126.555 1.00 47.57 C
ATOM 22 N2 G B1200 23.260 113.792 126.810 1.00 47.48 N
ATOM 23 N3 G B1200 25.257 114.832 126.375 1.00 45.97 N
ATOM 24 C4 G B1200 26.562 114.588 126.163 1.00 44.29 C
ATOM 25 P A B1201 29.438 119.147 129.795 1.00 40.76 P
ATOM 26 OP1 A B1201 29.127 120.376 130.554 1.00 40.19 O
ATOM 27 OP2 A B1201 30.828 118.874 129.394 1.00 40.69 O
ATOM 28 O5' A B1201 28.918 117.887 130.622 1.00 40.75 O
TER
ATOM 2 P C A1197 39.775 110.075 125.793 1.00 43.34 P
ATOM 3 OP1 C A1197 40.239 109.497 127.073 1.00 43.32 O
ATOM 4 OP2 C A1197 40.678 110.074 124.618 1.00 44.93 O
ATOM 5 O5' C A1197 38.443 109.314 125.387 1.00 43.71 O
ATOM 6 C5' C A1197 37.940 109.327 124.041 1.00 42.13 C
ATOM 7 C4' C A1197 36.817 108.330 123.934 1.00 44.00 C
ATOM 8 O4' C A1197 35.988 108.469 125.115 1.00 44.03 O
ATOM 9 C3' C A1197 35.873 108.482 122.752 1.00 45.05 C
ATOM 10 O3' C A1197 36.348 107.764 121.604 1.00 45.49 O
ATOM 11 C2' C A1197 34.581 107.866 123.292 1.00 44.62 C
ATOM 12 O2' C A1197 34.565 106.450 123.203 1.00 43.99 O
ATOM 13 C1' C A1197 34.632 108.274 124.773 1.00 43.49 C
ATOM 14 N1 C A1197 33.878 109.491 125.137 1.00 41.66 N
ATOM 15 C2 C A1197 32.499 109.392 125.349 1.00 42.76 C
ATOM 16 O2 C A1197 31.951 108.287 125.243 1.00 45.04 O
ATOM 17 N3 C A1197 31.795 110.502 125.661 1.00 42.49 N
ATOM 18 C4 C A1197 32.415 111.675 125.765 1.00 42.24 C
ATOM 19 N4 C A1197 31.673 112.746 126.053 1.00 42.21 N
ATOM 20 C5 C A1197 33.822 111.803 125.572 1.00 40.92 C
ATOM 21 C6 C A1197 34.506 110.697 125.262 1.00 40.38 C
ATOM 22 P G A1198 36.891 108.558 120.307 1.00 45.69 P
ATOM 23 OP1 G A1198 36.728 107.650 119.137 1.00 45.22 O
ATOM 24 OP2 G A1198 38.235 109.101 120.639 1.00 45.27 O
ATOM 25 O5' G A1198 35.904 109.794 120.114 1.00 44.21 O
TER
ATOM 1 O3' G B1199 32.877 117.147 124.442 1.00 38.64 O
ATOM 2 P G B1200 32.587 116.864 125.994 1.00 38.39 P
ATOM 3 OP1 G B1200 33.318 117.881 126.790 1.00 36.52 O
ATOM 4 OP2 G B1200 32.811 115.423 126.259 1.00 35.17 O
ATOM 5 O5' G B1200 31.031 117.164 126.125 1.00 38.68 O
ATOM 6 C5' G B1200 30.518 118.503 125.949 1.00 40.45 C
ATOM 7 C4' G B1200 29.021 118.524 126.173 1.00 41.51 C
ATOM 8 O4' G B1200 28.415 117.568 125.269 1.00 40.12 O
ATOM 9 C3' G B1200 28.540 118.093 127.555 1.00 41.59 C
ATOM 10 O3' G B1200 28.525 119.188 128.474 1.00 40.91 O
ATOM 11 C2' G B1200 27.126 117.621 127.262 1.00 40.71 C
ATOM 12 O2' G B1200 26.241 118.704 127.121 1.00 43.07 O
ATOM 13 C1' G B1200 27.301 116.970 125.891 1.00 40.90 C
ATOM 14 N9 G B1200 27.524 115.533 125.951 1.00 42.28 N
ATOM 15 C8 G B1200 28.708 114.857 125.801 1.00 43.30 C
ATOM 16 N7 G B1200 28.570 113.564 125.890 1.00 45.16 N
ATOM 17 C5 G B1200 27.215 113.381 126.112 1.00 45.44 C
ATOM 18 C6 G B1200 26.467 112.198 126.283 1.00 47.62 C
ATOM 19 O6 G B1200 26.857 111.029 126.249 1.00 50.84 O
ATOM 20 N1 G B1200 25.126 112.472 126.508 1.00 48.70 N
ATOM 21 C2 G B1200 24.573 113.725 126.555 1.00 47.57 C
ATOM 22 N2 G B1200 23.260 113.792 126.810 1.00 47.48 N
ATOM 23 N3 G B1200 25.257 114.832 126.375 1.00 45.97 N
ATOM 24 C4 G B1200 26.562 114.588 126.163 1.00 44.29 C
ATOM 25 P A B1201 29.438 119.147 129.795 1.00 40.76 P
ATOM 26 OP1 A B1201 29.127 120.376 130.554 1.00 40.19 O
ATOM 27 OP2 A B1201 30.828 118.874 129.394 1.00 40.69 O
ATOM 28 O5' A B1201 28.918 117.887 130.622 1.00 40.75 O
TER
Atoms:
C2: (32.499,109.392,125.349)
OP1: (40.239,109.497,127.073)
OP2: (40.678,110.074,124.618)
C4: (32.415,111.675,125.765)
O5': (38.443,109.314,125.387)
C3': (35.873,108.482,122.752)
C1': (34.632,108.274,124.773)
O4': (35.988,108.469,125.115)
C5': (37.940,109.327,124.041)
P: (39.775,110.075,125.793)
O2: (31.951,108.287,125.243)
C4': (36.817,108.330,123.934)
C2': (34.581,107.866,123.292)
O2': (34.565,106.450,123.203)
N1: (33.878,109.491,125.137)
N3: (31.795,110.502,125.661)
N4: (31.673,112.746,126.053)
C6: (34.506,110.697,125.262)
C5: (33.822,111.803,125.572)
O3': (36.348,107.764,121.604)
OP1: (40.239,109.497,127.073)
OP2: (40.678,110.074,124.618)
C4: (32.415,111.675,125.765)
O5': (38.443,109.314,125.387)
C3': (35.873,108.482,122.752)
C1': (34.632,108.274,124.773)
O4': (35.988,108.469,125.115)
C5': (37.940,109.327,124.041)
P: (39.775,110.075,125.793)
O2: (31.951,108.287,125.243)
C4': (36.817,108.330,123.934)
C2': (34.581,107.866,123.292)
O2': (34.565,106.450,123.203)
N1: (33.878,109.491,125.137)
N3: (31.795,110.502,125.661)
N4: (31.673,112.746,126.053)
C6: (34.506,110.697,125.262)
C5: (33.822,111.803,125.572)
O3': (36.348,107.764,121.604)
OP1: (33.318,117.881,126.790)
OP2: (32.811,115.423,126.259)
C3': (28.540,118.093,127.555)
C1': (27.301,116.970,125.891)
C5': (30.518,118.503,125.949)
O6: (26.857,111.029,126.249)
O4': (28.415,117.568,125.269)
C8: (28.708,114.857,125.801)
C2: (24.573,113.725,126.555)
C6: (26.467,112.198,126.283)
C5: (27.215,113.381,126.112)
C4: (26.562,114.588,126.163)
P: (32.587,116.864,125.994)
C4': (29.021,118.524,126.173)
C2': (27.126,117.621,127.262)
O2': (26.241,118.704,127.121)
N1: (25.126,112.472,126.508)
N2: (23.260,113.792,126.810)
N3: (25.257,114.832,126.375)
N7: (28.570,113.564,125.890)
N9: (27.524,115.533,125.951)
O5': (31.031,117.164,126.125)
O3': (28.525,119.188,128.474)
OP2: (32.811,115.423,126.259)
C3': (28.540,118.093,127.555)
C1': (27.301,116.970,125.891)
C5': (30.518,118.503,125.949)
O6: (26.857,111.029,126.249)
O4': (28.415,117.568,125.269)
C8: (28.708,114.857,125.801)
C2: (24.573,113.725,126.555)
C6: (26.467,112.198,126.283)
C5: (27.215,113.381,126.112)
C4: (26.562,114.588,126.163)
P: (32.587,116.864,125.994)
C4': (29.021,118.524,126.173)
C2': (27.126,117.621,127.262)
O2': (26.241,118.704,127.121)
N1: (25.126,112.472,126.508)
N2: (23.260,113.792,126.810)
N3: (25.257,114.832,126.375)
N7: (28.570,113.564,125.890)
N9: (27.524,115.533,125.951)
O5': (31.031,117.164,126.125)
O3': (28.525,119.188,128.474)
Image (generated by PyMOL):