Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02629:02618
Extra
PDB:
ATOM 1 O3' U A2628 48.351 105.138 161.870 1.00 49.32 O
ATOM 2 P C A2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 3 OP1 C A2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 4 OP2 C A2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 5 O5' C A2629 47.995 107.640 161.899 1.00 49.69 O
ATOM 6 C5' C A2629 46.587 107.917 162.005 1.00 50.60 C
ATOM 7 C4' C A2629 46.076 108.510 160.718 1.00 50.61 C
ATOM 8 O4' C A2629 46.729 109.780 160.492 1.00 50.30 O
ATOM 9 C3' C A2629 46.346 107.680 159.473 1.00 49.61 C
ATOM 10 O3' C A2629 45.273 106.741 159.313 1.00 48.82 O
ATOM 11 C2' C A2629 46.388 108.741 158.380 1.00 49.96 C
ATOM 12 O2' C A2629 45.098 109.131 157.979 1.00 51.96 O
ATOM 13 C1' C A2629 47.008 109.931 159.118 1.00 51.02 C
ATOM 14 N1 C A2629 48.462 110.144 158.963 1.00 54.65 N
ATOM 15 C2 C A2629 48.939 110.725 157.779 1.00 56.04 C
ATOM 16 O2 C A2629 48.137 110.978 156.867 1.00 57.87 O
ATOM 17 N3 C A2629 50.260 110.997 157.660 1.00 56.74 N
ATOM 18 C4 C A2629 51.095 110.712 158.662 1.00 56.40 C
ATOM 19 N4 C A2629 52.384 111.050 158.518 1.00 56.11 N
ATOM 20 C5 C A2629 50.645 110.082 159.862 1.00 55.93 C
ATOM 21 C6 C A2629 49.335 109.815 159.968 1.00 55.42 C
ATOM 22 P U A2630 45.446 105.447 158.370 1.00 49.67 P
ATOM 23 OP1 U A2630 44.599 104.368 158.944 1.00 47.43 O
ATOM 24 OP2 U A2630 46.885 105.193 158.120 1.00 48.27 O
ATOM 25 O5' U A2630 44.774 105.902 156.999 1.00 50.48 O
TER
ATOM 1 O3' A B2617 54.962 113.632 161.216 1.00 52.70 O
ATOM 2 P G B2618 54.210 112.470 162.025 1.00 52.66 P
ATOM 3 OP1 G B2618 55.122 112.056 163.124 1.00 52.64 O
ATOM 4 OP2 G B2618 53.705 111.451 161.063 1.00 51.45 O
ATOM 5 O5' G B2618 52.974 113.259 162.636 1.00 50.86 O
ATOM 6 C5' G B2618 51.721 112.625 162.904 1.00 51.39 C
ATOM 7 C4' G B2618 50.721 113.675 163.310 1.00 52.88 C
ATOM 8 O4' G B2618 50.404 114.502 162.159 1.00 52.40 O
ATOM 9 C3' G B2618 49.371 113.189 163.805 1.00 53.23 C
ATOM 10 O3' G B2618 49.454 112.819 165.180 1.00 53.68 O
ATOM 11 C2' G B2618 48.498 114.417 163.570 1.00 52.60 C
ATOM 12 O2' G B2618 48.706 115.427 164.538 1.00 52.09 O
ATOM 13 C1' G B2618 49.050 114.919 162.232 1.00 52.04 C
ATOM 14 N9 G B2618 48.333 114.376 161.079 1.00 51.45 N
ATOM 15 C8 G B2618 48.820 113.525 160.114 1.00 49.49 C
ATOM 16 N7 G B2618 47.926 113.197 159.223 1.00 49.19 N
ATOM 17 C5 G B2618 46.778 113.872 159.622 1.00 51.29 C
ATOM 18 C6 G B2618 45.472 113.891 159.055 1.00 51.57 C
ATOM 19 O6 G B2618 45.054 113.296 158.058 1.00 53.87 O
ATOM 20 N1 G B2618 44.613 114.706 159.778 1.00 51.33 N
ATOM 21 C2 G B2618 44.955 115.410 160.902 1.00 53.15 C
ATOM 22 N2 G B2618 43.981 116.142 161.457 1.00 54.57 N
ATOM 23 N3 G B2618 46.161 115.399 161.444 1.00 52.84 N
ATOM 24 C4 G B2618 47.017 114.613 160.757 1.00 51.61 C
ATOM 25 P C B2619 48.564 111.607 165.740 1.00 54.81 P
ATOM 26 OP1 C B2619 49.074 111.307 167.103 1.00 54.71 O
ATOM 27 OP2 C B2619 48.507 110.518 164.732 1.00 55.78 O
ATOM 28 O5' C B2619 47.113 112.249 165.853 1.00 52.77 O
TER
ATOM 2 P C A2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 3 OP1 C A2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 4 OP2 C A2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 5 O5' C A2629 47.995 107.640 161.899 1.00 49.69 O
ATOM 6 C5' C A2629 46.587 107.917 162.005 1.00 50.60 C
ATOM 7 C4' C A2629 46.076 108.510 160.718 1.00 50.61 C
ATOM 8 O4' C A2629 46.729 109.780 160.492 1.00 50.30 O
ATOM 9 C3' C A2629 46.346 107.680 159.473 1.00 49.61 C
ATOM 10 O3' C A2629 45.273 106.741 159.313 1.00 48.82 O
ATOM 11 C2' C A2629 46.388 108.741 158.380 1.00 49.96 C
ATOM 12 O2' C A2629 45.098 109.131 157.979 1.00 51.96 O
ATOM 13 C1' C A2629 47.008 109.931 159.118 1.00 51.02 C
ATOM 14 N1 C A2629 48.462 110.144 158.963 1.00 54.65 N
ATOM 15 C2 C A2629 48.939 110.725 157.779 1.00 56.04 C
ATOM 16 O2 C A2629 48.137 110.978 156.867 1.00 57.87 O
ATOM 17 N3 C A2629 50.260 110.997 157.660 1.00 56.74 N
ATOM 18 C4 C A2629 51.095 110.712 158.662 1.00 56.40 C
ATOM 19 N4 C A2629 52.384 111.050 158.518 1.00 56.11 N
ATOM 20 C5 C A2629 50.645 110.082 159.862 1.00 55.93 C
ATOM 21 C6 C A2629 49.335 109.815 159.968 1.00 55.42 C
ATOM 22 P U A2630 45.446 105.447 158.370 1.00 49.67 P
ATOM 23 OP1 U A2630 44.599 104.368 158.944 1.00 47.43 O
ATOM 24 OP2 U A2630 46.885 105.193 158.120 1.00 48.27 O
ATOM 25 O5' U A2630 44.774 105.902 156.999 1.00 50.48 O
TER
ATOM 1 O3' A B2617 54.962 113.632 161.216 1.00 52.70 O
ATOM 2 P G B2618 54.210 112.470 162.025 1.00 52.66 P
ATOM 3 OP1 G B2618 55.122 112.056 163.124 1.00 52.64 O
ATOM 4 OP2 G B2618 53.705 111.451 161.063 1.00 51.45 O
ATOM 5 O5' G B2618 52.974 113.259 162.636 1.00 50.86 O
ATOM 6 C5' G B2618 51.721 112.625 162.904 1.00 51.39 C
ATOM 7 C4' G B2618 50.721 113.675 163.310 1.00 52.88 C
ATOM 8 O4' G B2618 50.404 114.502 162.159 1.00 52.40 O
ATOM 9 C3' G B2618 49.371 113.189 163.805 1.00 53.23 C
ATOM 10 O3' G B2618 49.454 112.819 165.180 1.00 53.68 O
ATOM 11 C2' G B2618 48.498 114.417 163.570 1.00 52.60 C
ATOM 12 O2' G B2618 48.706 115.427 164.538 1.00 52.09 O
ATOM 13 C1' G B2618 49.050 114.919 162.232 1.00 52.04 C
ATOM 14 N9 G B2618 48.333 114.376 161.079 1.00 51.45 N
ATOM 15 C8 G B2618 48.820 113.525 160.114 1.00 49.49 C
ATOM 16 N7 G B2618 47.926 113.197 159.223 1.00 49.19 N
ATOM 17 C5 G B2618 46.778 113.872 159.622 1.00 51.29 C
ATOM 18 C6 G B2618 45.472 113.891 159.055 1.00 51.57 C
ATOM 19 O6 G B2618 45.054 113.296 158.058 1.00 53.87 O
ATOM 20 N1 G B2618 44.613 114.706 159.778 1.00 51.33 N
ATOM 21 C2 G B2618 44.955 115.410 160.902 1.00 53.15 C
ATOM 22 N2 G B2618 43.981 116.142 161.457 1.00 54.57 N
ATOM 23 N3 G B2618 46.161 115.399 161.444 1.00 52.84 N
ATOM 24 C4 G B2618 47.017 114.613 160.757 1.00 51.61 C
ATOM 25 P C B2619 48.564 111.607 165.740 1.00 54.81 P
ATOM 26 OP1 C B2619 49.074 111.307 167.103 1.00 54.71 O
ATOM 27 OP2 C B2619 48.507 110.518 164.732 1.00 55.78 O
ATOM 28 O5' C B2619 47.113 112.249 165.853 1.00 52.77 O
TER
Atoms:
C2: (48.939,110.725,157.779)
OP1: (50.109,106.681,162.763)
OP2: (47.901,106.312,164.003)
C4: (51.095,110.712,158.662)
O5': (47.995,107.640,161.899)
C3': (46.346,107.680,159.473)
C1': (47.008,109.931,159.118)
O4': (46.729,109.780,160.492)
C5': (46.587,107.917,162.005)
P: (48.650,106.454,162.732)
O2: (48.137,110.978,156.867)
C4': (46.076,108.510,160.718)
C2': (46.388,108.741,158.380)
O2': (45.098,109.131,157.979)
N1: (48.462,110.144,158.963)
N3: (50.260,110.997,157.660)
N4: (52.384,111.050,158.518)
C6: (49.335,109.815,159.968)
C5: (50.645,110.082,159.862)
O3': (45.273,106.741,159.313)
OP1: (50.109,106.681,162.763)
OP2: (47.901,106.312,164.003)
C4: (51.095,110.712,158.662)
O5': (47.995,107.640,161.899)
C3': (46.346,107.680,159.473)
C1': (47.008,109.931,159.118)
O4': (46.729,109.780,160.492)
C5': (46.587,107.917,162.005)
P: (48.650,106.454,162.732)
O2: (48.137,110.978,156.867)
C4': (46.076,108.510,160.718)
C2': (46.388,108.741,158.380)
O2': (45.098,109.131,157.979)
N1: (48.462,110.144,158.963)
N3: (50.260,110.997,157.660)
N4: (52.384,111.050,158.518)
C6: (49.335,109.815,159.968)
C5: (50.645,110.082,159.862)
O3': (45.273,106.741,159.313)
OP1: (55.122,112.056,163.124)
OP2: (53.705,111.451,161.063)
C3': (49.371,113.189,163.805)
C1': (49.050,114.919,162.232)
C5': (51.721,112.625,162.904)
O6: (45.054,113.296,158.058)
O4': (50.404,114.502,162.159)
C8: (48.820,113.525,160.114)
C2: (44.955,115.410,160.902)
C6: (45.472,113.891,159.055)
C5: (46.778,113.872,159.622)
C4: (47.017,114.613,160.757)
P: (54.210,112.470,162.025)
C4': (50.721,113.675,163.310)
C2': (48.498,114.417,163.570)
O2': (48.706,115.427,164.538)
N1: (44.613,114.706,159.778)
N2: (43.981,116.142,161.457)
N3: (46.161,115.399,161.444)
N7: (47.926,113.197,159.223)
N9: (48.333,114.376,161.079)
O5': (52.974,113.259,162.636)
O3': (49.454,112.819,165.180)
OP2: (53.705,111.451,161.063)
C3': (49.371,113.189,163.805)
C1': (49.050,114.919,162.232)
C5': (51.721,112.625,162.904)
O6: (45.054,113.296,158.058)
O4': (50.404,114.502,162.159)
C8: (48.820,113.525,160.114)
C2: (44.955,115.410,160.902)
C6: (45.472,113.891,159.055)
C5: (46.778,113.872,159.622)
C4: (47.017,114.613,160.757)
P: (54.210,112.470,162.025)
C4': (50.721,113.675,163.310)
C2': (48.498,114.417,163.570)
O2': (48.706,115.427,164.538)
N1: (44.613,114.706,159.778)
N2: (43.981,116.142,161.457)
N3: (46.161,115.399,161.444)
N7: (47.926,113.197,159.223)
N9: (48.333,114.376,161.079)
O5': (52.974,113.259,162.636)
O3': (49.454,112.819,165.180)
Image (generated by PyMOL):