Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2312:A2121
Extra
PDB:
ATOM 1 O3' A A2311 -94.297 -35.114 37.282 1.00 15.57 O
ATOM 2 P A A2312 -95.237 -35.754 36.149 1.00 17.94 P
ATOM 3 OP1 A A2312 -96.610 -35.215 36.278 1.00 8.94 O
ATOM 4 OP2 A A2312 -95.037 -37.213 36.131 1.00 8.94 O
ATOM 5 O5' A A2312 -94.645 -35.123 34.826 1.00 1.74 O
ATOM 6 C5' A A2312 -94.026 -35.931 33.840 1.00 1.74 C
ATOM 7 C4' A A2312 -93.290 -35.051 32.878 1.00 1.74 C
ATOM 8 O4' A A2312 -92.094 -34.552 33.518 1.00 1.74 O
ATOM 9 C3' A A2312 -92.797 -35.676 31.589 1.00 1.74 C
ATOM 10 O3' A A2312 -93.843 -35.692 30.615 1.00 1.74 O
ATOM 11 C2' A A2312 -91.686 -34.721 31.181 1.00 1.74 C
ATOM 12 O2' A A2312 -92.251 -33.615 30.515 1.00 1.74 O
ATOM 13 C1' A A2312 -91.118 -34.281 32.535 1.00 1.74 C
ATOM 14 N9 A A2312 -89.882 -34.968 32.900 1.00 0.79 N
ATOM 15 C8 A A2312 -89.723 -36.042 33.730 1.00 0.79 C
ATOM 16 N7 A A2312 -88.485 -36.454 33.821 1.00 0.79 N
ATOM 17 C5 A A2312 -87.786 -35.584 33.007 1.00 0.79 C
ATOM 18 C6 A A2312 -86.438 -35.493 32.689 1.00 0.79 C
ATOM 19 N6 A A2312 -85.519 -36.345 33.147 1.00 0.79 N
ATOM 20 N1 A A2312 -86.049 -34.495 31.864 1.00 0.79 N
ATOM 21 C2 A A2312 -86.982 -33.672 31.386 1.00 0.79 C
ATOM 22 N3 A A2312 -88.291 -33.671 31.604 1.00 0.79 N
ATOM 23 C4 A A2312 -88.628 -34.661 32.441 1.00 0.79 C
ATOM 24 P G A2313 -93.627 -36.473 29.229 1.00 5.08 P
ATOM 25 OP1 G A2313 -94.805 -36.180 28.377 1.00 10.94 O
ATOM 26 OP2 G A2313 -93.251 -37.889 29.513 1.00 10.94 O
ATOM 27 O5' G A2313 -92.360 -35.753 28.586 1.00 0.79 O
TER
ATOM 1 O3' U B2120 -86.316 -44.215 39.378 1.00 1.70 O
ATOM 2 P U B2121 -87.051 -44.823 38.084 1.00 8.93 P
ATOM 3 OP1 U B2121 -87.535 -46.183 38.419 1.00 8.93 O
ATOM 4 OP2 U B2121 -86.163 -44.627 36.913 1.00 8.93 O
ATOM 5 O5' U B2121 -88.329 -43.901 37.940 1.00 0.79 O
ATOM 6 C5' U B2121 -89.229 -43.746 39.037 1.00 0.79 C
ATOM 7 C4' U B2121 -90.239 -42.685 38.711 1.00 0.79 C
ATOM 8 O4' U B2121 -89.605 -41.387 38.722 1.00 0.79 O
ATOM 9 C3' U B2121 -90.816 -42.816 37.323 1.00 0.79 C
ATOM 10 O3' U B2121 -91.900 -43.719 37.328 1.00 0.79 O
ATOM 11 C2' U B2121 -91.237 -41.396 37.011 1.00 0.79 C
ATOM 12 O2' U B2121 -92.474 -41.120 37.633 1.00 0.79 O
ATOM 13 C1' U B2121 -90.125 -40.593 37.685 1.00 0.79 C
ATOM 14 N1 U B2121 -89.010 -40.258 36.786 1.00 3.52 N
ATOM 15 C2 U B2121 -88.997 -39.004 36.207 1.00 3.52 C
ATOM 16 O2 U B2121 -89.858 -38.180 36.405 1.00 3.52 O
ATOM 17 N3 U B2121 -87.940 -38.750 35.374 1.00 3.52 N
ATOM 18 C4 U B2121 -86.926 -39.608 35.045 1.00 3.52 C
ATOM 19 O4 U B2121 -86.116 -39.283 34.166 1.00 3.52 O
ATOM 20 C5 U B2121 -87.000 -40.889 35.693 1.00 3.52 C
ATOM 21 C6 U B2121 -88.013 -41.159 36.522 1.00 3.52 C
ATOM 22 P U B2122 -92.472 -44.264 35.934 1.00 22.74 P
ATOM 23 OP1 U B2122 -93.438 -45.384 36.128 1.00 34.07 O
ATOM 24 OP2 U B2122 -91.277 -44.470 35.065 1.00 34.07 O
ATOM 25 O5' U B2122 -93.299 -43.015 35.432 1.00 2.31 O
TER
ATOM 2 P A A2312 -95.237 -35.754 36.149 1.00 17.94 P
ATOM 3 OP1 A A2312 -96.610 -35.215 36.278 1.00 8.94 O
ATOM 4 OP2 A A2312 -95.037 -37.213 36.131 1.00 8.94 O
ATOM 5 O5' A A2312 -94.645 -35.123 34.826 1.00 1.74 O
ATOM 6 C5' A A2312 -94.026 -35.931 33.840 1.00 1.74 C
ATOM 7 C4' A A2312 -93.290 -35.051 32.878 1.00 1.74 C
ATOM 8 O4' A A2312 -92.094 -34.552 33.518 1.00 1.74 O
ATOM 9 C3' A A2312 -92.797 -35.676 31.589 1.00 1.74 C
ATOM 10 O3' A A2312 -93.843 -35.692 30.615 1.00 1.74 O
ATOM 11 C2' A A2312 -91.686 -34.721 31.181 1.00 1.74 C
ATOM 12 O2' A A2312 -92.251 -33.615 30.515 1.00 1.74 O
ATOM 13 C1' A A2312 -91.118 -34.281 32.535 1.00 1.74 C
ATOM 14 N9 A A2312 -89.882 -34.968 32.900 1.00 0.79 N
ATOM 15 C8 A A2312 -89.723 -36.042 33.730 1.00 0.79 C
ATOM 16 N7 A A2312 -88.485 -36.454 33.821 1.00 0.79 N
ATOM 17 C5 A A2312 -87.786 -35.584 33.007 1.00 0.79 C
ATOM 18 C6 A A2312 -86.438 -35.493 32.689 1.00 0.79 C
ATOM 19 N6 A A2312 -85.519 -36.345 33.147 1.00 0.79 N
ATOM 20 N1 A A2312 -86.049 -34.495 31.864 1.00 0.79 N
ATOM 21 C2 A A2312 -86.982 -33.672 31.386 1.00 0.79 C
ATOM 22 N3 A A2312 -88.291 -33.671 31.604 1.00 0.79 N
ATOM 23 C4 A A2312 -88.628 -34.661 32.441 1.00 0.79 C
ATOM 24 P G A2313 -93.627 -36.473 29.229 1.00 5.08 P
ATOM 25 OP1 G A2313 -94.805 -36.180 28.377 1.00 10.94 O
ATOM 26 OP2 G A2313 -93.251 -37.889 29.513 1.00 10.94 O
ATOM 27 O5' G A2313 -92.360 -35.753 28.586 1.00 0.79 O
TER
ATOM 1 O3' U B2120 -86.316 -44.215 39.378 1.00 1.70 O
ATOM 2 P U B2121 -87.051 -44.823 38.084 1.00 8.93 P
ATOM 3 OP1 U B2121 -87.535 -46.183 38.419 1.00 8.93 O
ATOM 4 OP2 U B2121 -86.163 -44.627 36.913 1.00 8.93 O
ATOM 5 O5' U B2121 -88.329 -43.901 37.940 1.00 0.79 O
ATOM 6 C5' U B2121 -89.229 -43.746 39.037 1.00 0.79 C
ATOM 7 C4' U B2121 -90.239 -42.685 38.711 1.00 0.79 C
ATOM 8 O4' U B2121 -89.605 -41.387 38.722 1.00 0.79 O
ATOM 9 C3' U B2121 -90.816 -42.816 37.323 1.00 0.79 C
ATOM 10 O3' U B2121 -91.900 -43.719 37.328 1.00 0.79 O
ATOM 11 C2' U B2121 -91.237 -41.396 37.011 1.00 0.79 C
ATOM 12 O2' U B2121 -92.474 -41.120 37.633 1.00 0.79 O
ATOM 13 C1' U B2121 -90.125 -40.593 37.685 1.00 0.79 C
ATOM 14 N1 U B2121 -89.010 -40.258 36.786 1.00 3.52 N
ATOM 15 C2 U B2121 -88.997 -39.004 36.207 1.00 3.52 C
ATOM 16 O2 U B2121 -89.858 -38.180 36.405 1.00 3.52 O
ATOM 17 N3 U B2121 -87.940 -38.750 35.374 1.00 3.52 N
ATOM 18 C4 U B2121 -86.926 -39.608 35.045 1.00 3.52 C
ATOM 19 O4 U B2121 -86.116 -39.283 34.166 1.00 3.52 O
ATOM 20 C5 U B2121 -87.000 -40.889 35.693 1.00 3.52 C
ATOM 21 C6 U B2121 -88.013 -41.159 36.522 1.00 3.52 C
ATOM 22 P U B2122 -92.472 -44.264 35.934 1.00 22.74 P
ATOM 23 OP1 U B2122 -93.438 -45.384 36.128 1.00 34.07 O
ATOM 24 OP2 U B2122 -91.277 -44.470 35.065 1.00 34.07 O
ATOM 25 O5' U B2122 -93.299 -43.015 35.432 1.00 2.31 O
TER
Atoms:
OP1: (-96.610,-35.215,36.278)
OP2: (-95.037,-37.213,36.131)
C3': (-92.797,-35.676,31.589)
C1': (-91.118,-34.281,32.535)
C5': (-94.026,-35.931,33.840)
O4': (-92.094,-34.552,33.518)
C8: (-89.723,-36.042,33.730)
O2': (-92.251,-33.615,30.515)
C6: (-86.438,-35.493,32.689)
C5: (-87.786,-35.584,33.007)
C4: (-88.628,-34.661,32.441)
P: (-95.237,-35.754,36.149)
C4': (-93.290,-35.051,32.878)
C2': (-91.686,-34.721,31.181)
C2: (-86.982,-33.672,31.386)
N1: (-86.049,-34.495,31.864)
N3: (-88.291,-33.671,31.604)
N6: (-85.519,-36.345,33.147)
N7: (-88.485,-36.454,33.821)
N9: (-89.882,-34.968,32.900)
O5': (-94.645,-35.123,34.826)
O3': (-93.843,-35.692,30.615)
OP2: (-95.037,-37.213,36.131)
C3': (-92.797,-35.676,31.589)
C1': (-91.118,-34.281,32.535)
C5': (-94.026,-35.931,33.840)
O4': (-92.094,-34.552,33.518)
C8: (-89.723,-36.042,33.730)
O2': (-92.251,-33.615,30.515)
C6: (-86.438,-35.493,32.689)
C5: (-87.786,-35.584,33.007)
C4: (-88.628,-34.661,32.441)
P: (-95.237,-35.754,36.149)
C4': (-93.290,-35.051,32.878)
C2': (-91.686,-34.721,31.181)
C2: (-86.982,-33.672,31.386)
N1: (-86.049,-34.495,31.864)
N3: (-88.291,-33.671,31.604)
N6: (-85.519,-36.345,33.147)
N7: (-88.485,-36.454,33.821)
N9: (-89.882,-34.968,32.900)
O5': (-94.645,-35.123,34.826)
O3': (-93.843,-35.692,30.615)
C4: (-86.926,-39.608,35.045)
N3: (-87.940,-38.750,35.374)
OP1: (-87.535,-46.183,38.419)
OP2: (-86.163,-44.627,36.913)
C2: (-88.997,-39.004,36.207)
C1': (-90.125,-40.593,37.685)
C3': (-90.816,-42.816,37.323)
O5': (-88.329,-43.901,37.940)
O4': (-89.605,-41.387,38.722)
C5': (-89.229,-43.746,39.037)
P: (-87.051,-44.823,38.084)
C4': (-90.239,-42.685,38.711)
C2': (-91.237,-41.396,37.011)
O2': (-92.474,-41.120,37.633)
N1: (-89.010,-40.258,36.786)
O4: (-86.116,-39.283,34.166)
O2: (-89.858,-38.180,36.405)
C6: (-88.013,-41.159,36.522)
C5: (-87.000,-40.889,35.693)
O3': (-91.900,-43.719,37.328)
N3: (-87.940,-38.750,35.374)
OP1: (-87.535,-46.183,38.419)
OP2: (-86.163,-44.627,36.913)
C2: (-88.997,-39.004,36.207)
C1': (-90.125,-40.593,37.685)
C3': (-90.816,-42.816,37.323)
O5': (-88.329,-43.901,37.940)
O4': (-89.605,-41.387,38.722)
C5': (-89.229,-43.746,39.037)
P: (-87.051,-44.823,38.084)
C4': (-90.239,-42.685,38.711)
C2': (-91.237,-41.396,37.011)
O2': (-92.474,-41.120,37.633)
N1: (-89.010,-40.258,36.786)
O4: (-86.116,-39.283,34.166)
O2: (-89.858,-38.180,36.405)
C6: (-88.013,-41.159,36.522)
C5: (-87.000,-40.889,35.693)
O3': (-91.900,-43.719,37.328)
Image (generated by PyMOL):