Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1379:X6
Extra
PDB:
ATOM 1 O3' G A1378 -52.092 98.222 83.305 1.00 6.60 O
ATOM 2 P C A1379 -51.655 97.783 84.798 1.00 27.66 P
ATOM 3 OP1 C A1379 -51.759 96.303 84.851 1.00 45.52 O
ATOM 4 OP2 C A1379 -52.402 98.613 85.796 1.00 45.81 O
ATOM 5 O5' C A1379 -50.113 98.161 84.893 1.00 6.19 O
ATOM 6 C5' C A1379 -49.200 97.690 83.909 1.00 5.73 C
ATOM 7 C4' C A1379 -47.986 98.585 83.831 1.00 5.12 C
ATOM 8 O4' C A1379 -48.387 99.957 83.558 1.00 7.33 O
ATOM 9 C3' C A1379 -47.097 98.708 85.058 1.00 4.43 C
ATOM 10 O3' C A1379 -46.225 97.588 85.215 1.00 3.61 O
ATOM 11 C2' C A1379 -46.331 99.995 84.748 1.00 5.74 C
ATOM 12 O2' C A1379 -45.257 99.864 83.823 1.00 3.61 O
ATOM 13 C1' C A1379 -47.404 100.845 84.071 1.00 7.20 C
ATOM 14 N1 C A1379 -48.013 101.779 85.037 1.00 4.72 N
ATOM 15 C2 C A1379 -47.188 102.751 85.650 1.00 5.32 C
ATOM 16 O2 C A1379 -46.006 102.857 85.296 1.00 7.80 O
ATOM 17 N3 C A1379 -47.705 103.551 86.600 1.00 6.91 N
ATOM 18 C4 C A1379 -48.987 103.444 86.929 1.00 6.05 C
ATOM 19 N4 C A1379 -49.444 104.240 87.885 1.00 3.09 N
ATOM 20 C5 C A1379 -49.861 102.506 86.293 1.00 6.15 C
ATOM 21 C6 C A1379 -49.335 101.699 85.363 1.00 4.95 C
ATOM 22 P C A1380 -45.856 97.058 86.696 1.00 23.35 P
ATOM 23 OP1 C A1380 -44.850 95.975 86.543 1.00 24.63 O
ATOM 24 OP2 C A1380 -47.110 96.792 87.471 1.00 21.51 O
ATOM 25 O5' C A1380 -45.093 98.293 87.355 1.00 56.68 O
TER
ATOM 1 O3' U B 5 -52.787 105.081 91.300 1.00 11.28 O
ATOM 2 P G B 6 -52.416 104.107 90.066 1.00 26.95 P
ATOM 3 OP1 G B 6 -51.229 103.342 90.532 1.00 34.06 O
ATOM 4 OP2 G B 6 -52.343 104.877 88.790 1.00 34.06 O
ATOM 5 O5' G B 6 -53.657 103.111 89.964 1.00 91.96 O
ATOM 6 C5' G B 6 -54.249 102.560 91.150 1.00 91.96 C
ATOM 7 C4' G B 6 -55.746 102.720 91.105 1.00 91.96 C
ATOM 8 O4' G B 6 -56.050 104.038 90.606 1.00 91.96 O
ATOM 9 C3' G B 6 -56.525 101.782 90.192 1.00 91.96 C
ATOM 10 O3' G B 6 -56.855 100.623 90.947 1.00 91.96 O
ATOM 11 C2' G B 6 -57.801 102.572 89.901 1.00 91.96 C
ATOM 12 O2' G B 6 -58.789 102.404 90.899 1.00 91.96 O
ATOM 13 C1' G B 6 -57.315 104.018 89.990 1.00 91.96 C
ATOM 14 N9 G B 6 -57.266 104.777 88.746 1.00 38.31 N
ATOM 15 C8 G B 6 -56.167 105.345 88.154 1.00 38.31 C
ATOM 16 N7 G B 6 -56.462 106.032 87.084 1.00 38.31 N
ATOM 17 C5 G B 6 -57.833 105.891 86.953 1.00 38.31 C
ATOM 18 C6 G B 6 -58.713 106.413 85.985 1.00 38.31 C
ATOM 19 O6 G B 6 -58.453 107.128 85.026 1.00 38.31 O
ATOM 20 N1 G B 6 -60.022 106.023 86.218 1.00 38.31 N
ATOM 21 C2 G B 6 -60.433 105.229 87.258 1.00 38.31 C
ATOM 22 N2 G B 6 -61.748 104.960 87.324 1.00 38.31 N
ATOM 23 N3 G B 6 -59.619 104.735 88.172 1.00 38.31 N
ATOM 24 C4 G B 6 -58.342 105.106 87.959 1.00 38.31 C
ATOM 25 P U B 7 -56.984 99.186 90.239 1.00 16.37 P
ATOM 26 OP1 U B 7 -55.757 98.949 89.429 1.00 40.06 O
ATOM 27 OP2 U B 7 -58.336 99.078 89.599 1.00 40.06 O
ATOM 28 O5' U B 7 -56.957 98.207 91.497 1.00 33.20 O
TER
ATOM 2 P C A1379 -51.655 97.783 84.798 1.00 27.66 P
ATOM 3 OP1 C A1379 -51.759 96.303 84.851 1.00 45.52 O
ATOM 4 OP2 C A1379 -52.402 98.613 85.796 1.00 45.81 O
ATOM 5 O5' C A1379 -50.113 98.161 84.893 1.00 6.19 O
ATOM 6 C5' C A1379 -49.200 97.690 83.909 1.00 5.73 C
ATOM 7 C4' C A1379 -47.986 98.585 83.831 1.00 5.12 C
ATOM 8 O4' C A1379 -48.387 99.957 83.558 1.00 7.33 O
ATOM 9 C3' C A1379 -47.097 98.708 85.058 1.00 4.43 C
ATOM 10 O3' C A1379 -46.225 97.588 85.215 1.00 3.61 O
ATOM 11 C2' C A1379 -46.331 99.995 84.748 1.00 5.74 C
ATOM 12 O2' C A1379 -45.257 99.864 83.823 1.00 3.61 O
ATOM 13 C1' C A1379 -47.404 100.845 84.071 1.00 7.20 C
ATOM 14 N1 C A1379 -48.013 101.779 85.037 1.00 4.72 N
ATOM 15 C2 C A1379 -47.188 102.751 85.650 1.00 5.32 C
ATOM 16 O2 C A1379 -46.006 102.857 85.296 1.00 7.80 O
ATOM 17 N3 C A1379 -47.705 103.551 86.600 1.00 6.91 N
ATOM 18 C4 C A1379 -48.987 103.444 86.929 1.00 6.05 C
ATOM 19 N4 C A1379 -49.444 104.240 87.885 1.00 3.09 N
ATOM 20 C5 C A1379 -49.861 102.506 86.293 1.00 6.15 C
ATOM 21 C6 C A1379 -49.335 101.699 85.363 1.00 4.95 C
ATOM 22 P C A1380 -45.856 97.058 86.696 1.00 23.35 P
ATOM 23 OP1 C A1380 -44.850 95.975 86.543 1.00 24.63 O
ATOM 24 OP2 C A1380 -47.110 96.792 87.471 1.00 21.51 O
ATOM 25 O5' C A1380 -45.093 98.293 87.355 1.00 56.68 O
TER
ATOM 1 O3' U B 5 -52.787 105.081 91.300 1.00 11.28 O
ATOM 2 P G B 6 -52.416 104.107 90.066 1.00 26.95 P
ATOM 3 OP1 G B 6 -51.229 103.342 90.532 1.00 34.06 O
ATOM 4 OP2 G B 6 -52.343 104.877 88.790 1.00 34.06 O
ATOM 5 O5' G B 6 -53.657 103.111 89.964 1.00 91.96 O
ATOM 6 C5' G B 6 -54.249 102.560 91.150 1.00 91.96 C
ATOM 7 C4' G B 6 -55.746 102.720 91.105 1.00 91.96 C
ATOM 8 O4' G B 6 -56.050 104.038 90.606 1.00 91.96 O
ATOM 9 C3' G B 6 -56.525 101.782 90.192 1.00 91.96 C
ATOM 10 O3' G B 6 -56.855 100.623 90.947 1.00 91.96 O
ATOM 11 C2' G B 6 -57.801 102.572 89.901 1.00 91.96 C
ATOM 12 O2' G B 6 -58.789 102.404 90.899 1.00 91.96 O
ATOM 13 C1' G B 6 -57.315 104.018 89.990 1.00 91.96 C
ATOM 14 N9 G B 6 -57.266 104.777 88.746 1.00 38.31 N
ATOM 15 C8 G B 6 -56.167 105.345 88.154 1.00 38.31 C
ATOM 16 N7 G B 6 -56.462 106.032 87.084 1.00 38.31 N
ATOM 17 C5 G B 6 -57.833 105.891 86.953 1.00 38.31 C
ATOM 18 C6 G B 6 -58.713 106.413 85.985 1.00 38.31 C
ATOM 19 O6 G B 6 -58.453 107.128 85.026 1.00 38.31 O
ATOM 20 N1 G B 6 -60.022 106.023 86.218 1.00 38.31 N
ATOM 21 C2 G B 6 -60.433 105.229 87.258 1.00 38.31 C
ATOM 22 N2 G B 6 -61.748 104.960 87.324 1.00 38.31 N
ATOM 23 N3 G B 6 -59.619 104.735 88.172 1.00 38.31 N
ATOM 24 C4 G B 6 -58.342 105.106 87.959 1.00 38.31 C
ATOM 25 P U B 7 -56.984 99.186 90.239 1.00 16.37 P
ATOM 26 OP1 U B 7 -55.757 98.949 89.429 1.00 40.06 O
ATOM 27 OP2 U B 7 -58.336 99.078 89.599 1.00 40.06 O
ATOM 28 O5' U B 7 -56.957 98.207 91.497 1.00 33.20 O
TER
Atoms:
C2: (-47.188,102.751,85.650)
OP1: (-51.759,96.303,84.851)
OP2: (-52.402,98.613,85.796)
C4: (-48.987,103.444,86.929)
O5': (-50.113,98.161,84.893)
C3': (-47.097,98.708,85.058)
C1': (-47.404,100.845,84.071)
O4': (-48.387,99.957,83.558)
C5': (-49.200,97.690,83.909)
P: (-51.655,97.783,84.798)
O2: (-46.006,102.857,85.296)
C4': (-47.986,98.585,83.831)
C2': (-46.331,99.995,84.748)
O2': (-45.257,99.864,83.823)
N1: (-48.013,101.779,85.037)
N3: (-47.705,103.551,86.600)
N4: (-49.444,104.240,87.885)
C6: (-49.335,101.699,85.363)
C5: (-49.861,102.506,86.293)
O3': (-46.225,97.588,85.215)
OP1: (-51.759,96.303,84.851)
OP2: (-52.402,98.613,85.796)
C4: (-48.987,103.444,86.929)
O5': (-50.113,98.161,84.893)
C3': (-47.097,98.708,85.058)
C1': (-47.404,100.845,84.071)
O4': (-48.387,99.957,83.558)
C5': (-49.200,97.690,83.909)
P: (-51.655,97.783,84.798)
O2: (-46.006,102.857,85.296)
C4': (-47.986,98.585,83.831)
C2': (-46.331,99.995,84.748)
O2': (-45.257,99.864,83.823)
N1: (-48.013,101.779,85.037)
N3: (-47.705,103.551,86.600)
N4: (-49.444,104.240,87.885)
C6: (-49.335,101.699,85.363)
C5: (-49.861,102.506,86.293)
O3': (-46.225,97.588,85.215)
OP1: (-51.229,103.342,90.532)
OP2: (-52.343,104.877,88.790)
C3': (-56.525,101.782,90.192)
C1': (-57.315,104.018,89.990)
C5': (-54.249,102.560,91.150)
O6: (-58.453,107.128,85.026)
O4': (-56.050,104.038,90.606)
C8: (-56.167,105.345,88.154)
C2: (-60.433,105.229,87.258)
C6: (-58.713,106.413,85.985)
C5: (-57.833,105.891,86.953)
C4: (-58.342,105.106,87.959)
P: (-52.416,104.107,90.066)
C4': (-55.746,102.720,91.105)
C2': (-57.801,102.572,89.901)
O2': (-58.789,102.404,90.899)
N1: (-60.022,106.023,86.218)
N2: (-61.748,104.960,87.324)
N3: (-59.619,104.735,88.172)
N7: (-56.462,106.032,87.084)
N9: (-57.266,104.777,88.746)
O5': (-53.657,103.111,89.964)
O3': (-56.855,100.623,90.947)
OP2: (-52.343,104.877,88.790)
C3': (-56.525,101.782,90.192)
C1': (-57.315,104.018,89.990)
C5': (-54.249,102.560,91.150)
O6: (-58.453,107.128,85.026)
O4': (-56.050,104.038,90.606)
C8: (-56.167,105.345,88.154)
C2: (-60.433,105.229,87.258)
C6: (-58.713,106.413,85.985)
C5: (-57.833,105.891,86.953)
C4: (-58.342,105.106,87.959)
P: (-52.416,104.107,90.066)
C4': (-55.746,102.720,91.105)
C2': (-57.801,102.572,89.901)
O2': (-58.789,102.404,90.899)
N1: (-60.022,106.023,86.218)
N2: (-61.748,104.960,87.324)
N3: (-59.619,104.735,88.172)
N7: (-56.462,106.032,87.084)
N9: (-57.266,104.777,88.746)
O5': (-53.657,103.111,89.964)
O3': (-56.855,100.623,90.947)
Image (generated by PyMOL):