Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:A1379:X6
Extra
PDB:
ATOM 1 O3' G A1378 -105.418 29.608 -13.370 1.00 12.55 O
ATOM 2 P C A1379 -104.912 28.165 -13.885 1.00 39.33 P
ATOM 3 OP1 C A1379 -104.899 28.179 -15.374 1.00 57.19 O
ATOM 4 OP2 C A1379 -105.719 27.138 -13.171 1.00 57.48 O
ATOM 5 O5' C A1379 -103.388 28.097 -13.411 1.00 3.19 O
ATOM 6 C5' C A1379 -102.403 28.921 -14.042 1.00 2.73 C
ATOM 7 C4' C A1379 -101.146 29.012 -13.207 1.00 2.12 C
ATOM 8 O4' C A1379 -101.491 29.258 -11.819 1.00 4.33 O
ATOM 9 C3' C A1379 -100.245 27.792 -13.133 1.00 1.43 C
ATOM 10 O3' C A1379 -99.410 27.652 -14.259 1.00 0.79 O
ATOM 11 C2' C A1379 -99.433 28.074 -11.875 1.00 2.74 C
ATOM 12 O2' C A1379 -98.370 28.997 -12.088 1.00 0.79 O
ATOM 13 C1' C A1379 -100.501 28.686 -10.971 1.00 4.20 C
ATOM 14 N1 C A1379 -101.134 27.658 -10.111 1.00 19.79 N
ATOM 15 C2 C A1379 -100.385 27.107 -9.053 1.00 20.39 C
ATOM 16 O2 C A1379 -99.223 27.499 -8.873 1.00 22.87 O
ATOM 17 N3 C A1379 -100.950 26.160 -8.258 1.00 21.98 N
ATOM 18 C4 C A1379 -102.207 25.764 -8.481 1.00 21.12 C
ATOM 19 N4 C A1379 -102.730 24.842 -7.663 1.00 18.16 N
ATOM 20 C5 C A1379 -102.987 26.300 -9.549 1.00 21.22 C
ATOM 21 C6 C A1379 -102.418 27.237 -10.331 1.00 20.02 C
ATOM 22 P C A1380 -99.046 26.182 -14.791 1.00 24.61 P
ATOM 23 OP1 C A1380 -98.023 26.389 -15.861 1.00 25.89 O
ATOM 24 OP2 C A1380 -100.301 25.434 -15.091 1.00 22.77 O
ATOM 25 O5' C A1380 -98.350 25.475 -13.551 1.00 11.18 O
TER
ATOM 1 O3' U B 5 -106.263 21.341 -6.679 1.00 11.34 O
ATOM 2 P G B 6 -106.084 22.421 -7.861 1.00 19.29 P
ATOM 3 OP1 G B 6 -105.354 21.709 -8.945 1.00 26.40 O
ATOM 4 OP2 G B 6 -105.534 23.696 -7.324 1.00 26.40 O
ATOM 5 O5' G B 6 -107.566 22.711 -8.362 1.00 74.22 O
ATOM 6 C5' G B 6 -108.417 21.644 -8.794 1.00 74.22 C
ATOM 7 C4' G B 6 -109.809 22.159 -9.048 1.00 74.22 C
ATOM 8 O4' G B 6 -110.375 22.665 -7.827 1.00 74.22 O
ATOM 9 C3' G B 6 -109.934 23.288 -10.057 1.00 74.22 C
ATOM 10 O3' G B 6 -110.117 22.604 -11.282 1.00 74.22 O
ATOM 11 C2' G B 6 -111.212 24.014 -9.628 1.00 74.22 C
ATOM 12 O2' G B 6 -112.375 23.483 -10.243 1.00 74.22 O
ATOM 13 C1' G B 6 -111.275 23.708 -8.128 1.00 74.22 C
ATOM 14 N9 G B 6 -111.075 24.777 -7.157 1.00 24.18 N
ATOM 15 C8 G B 6 -109.893 25.166 -6.584 1.00 24.18 C
ATOM 16 N7 G B 6 -110.049 26.050 -5.643 1.00 24.18 N
ATOM 17 C5 G B 6 -111.410 26.280 -5.622 1.00 24.18 C
ATOM 18 C6 G B 6 -112.164 27.121 -4.803 1.00 24.18 C
ATOM 19 O6 G B 6 -111.776 27.844 -3.888 1.00 24.18 O
ATOM 20 N1 G B 6 -113.511 27.067 -5.121 1.00 24.18 N
ATOM 21 C2 G B 6 -114.056 26.287 -6.106 1.00 24.18 C
ATOM 22 N2 G B 6 -115.384 26.373 -6.267 1.00 24.18 N
ATOM 23 N3 G B 6 -113.355 25.482 -6.872 1.00 24.18 N
ATOM 24 C4 G B 6 -112.049 25.528 -6.576 1.00 24.18 C
ATOM 25 P U B 7 -110.234 23.399 -12.665 1.00 62.50 P
ATOM 26 OP1 U B 7 -109.070 24.323 -12.786 1.00 86.19 O
ATOM 27 OP2 U B 7 -111.621 23.918 -12.812 1.00 86.19 O
ATOM 28 O5' U B 7 -110.056 22.217 -13.706 1.00 15.44 O
TER
ATOM 2 P C A1379 -104.912 28.165 -13.885 1.00 39.33 P
ATOM 3 OP1 C A1379 -104.899 28.179 -15.374 1.00 57.19 O
ATOM 4 OP2 C A1379 -105.719 27.138 -13.171 1.00 57.48 O
ATOM 5 O5' C A1379 -103.388 28.097 -13.411 1.00 3.19 O
ATOM 6 C5' C A1379 -102.403 28.921 -14.042 1.00 2.73 C
ATOM 7 C4' C A1379 -101.146 29.012 -13.207 1.00 2.12 C
ATOM 8 O4' C A1379 -101.491 29.258 -11.819 1.00 4.33 O
ATOM 9 C3' C A1379 -100.245 27.792 -13.133 1.00 1.43 C
ATOM 10 O3' C A1379 -99.410 27.652 -14.259 1.00 0.79 O
ATOM 11 C2' C A1379 -99.433 28.074 -11.875 1.00 2.74 C
ATOM 12 O2' C A1379 -98.370 28.997 -12.088 1.00 0.79 O
ATOM 13 C1' C A1379 -100.501 28.686 -10.971 1.00 4.20 C
ATOM 14 N1 C A1379 -101.134 27.658 -10.111 1.00 19.79 N
ATOM 15 C2 C A1379 -100.385 27.107 -9.053 1.00 20.39 C
ATOM 16 O2 C A1379 -99.223 27.499 -8.873 1.00 22.87 O
ATOM 17 N3 C A1379 -100.950 26.160 -8.258 1.00 21.98 N
ATOM 18 C4 C A1379 -102.207 25.764 -8.481 1.00 21.12 C
ATOM 19 N4 C A1379 -102.730 24.842 -7.663 1.00 18.16 N
ATOM 20 C5 C A1379 -102.987 26.300 -9.549 1.00 21.22 C
ATOM 21 C6 C A1379 -102.418 27.237 -10.331 1.00 20.02 C
ATOM 22 P C A1380 -99.046 26.182 -14.791 1.00 24.61 P
ATOM 23 OP1 C A1380 -98.023 26.389 -15.861 1.00 25.89 O
ATOM 24 OP2 C A1380 -100.301 25.434 -15.091 1.00 22.77 O
ATOM 25 O5' C A1380 -98.350 25.475 -13.551 1.00 11.18 O
TER
ATOM 1 O3' U B 5 -106.263 21.341 -6.679 1.00 11.34 O
ATOM 2 P G B 6 -106.084 22.421 -7.861 1.00 19.29 P
ATOM 3 OP1 G B 6 -105.354 21.709 -8.945 1.00 26.40 O
ATOM 4 OP2 G B 6 -105.534 23.696 -7.324 1.00 26.40 O
ATOM 5 O5' G B 6 -107.566 22.711 -8.362 1.00 74.22 O
ATOM 6 C5' G B 6 -108.417 21.644 -8.794 1.00 74.22 C
ATOM 7 C4' G B 6 -109.809 22.159 -9.048 1.00 74.22 C
ATOM 8 O4' G B 6 -110.375 22.665 -7.827 1.00 74.22 O
ATOM 9 C3' G B 6 -109.934 23.288 -10.057 1.00 74.22 C
ATOM 10 O3' G B 6 -110.117 22.604 -11.282 1.00 74.22 O
ATOM 11 C2' G B 6 -111.212 24.014 -9.628 1.00 74.22 C
ATOM 12 O2' G B 6 -112.375 23.483 -10.243 1.00 74.22 O
ATOM 13 C1' G B 6 -111.275 23.708 -8.128 1.00 74.22 C
ATOM 14 N9 G B 6 -111.075 24.777 -7.157 1.00 24.18 N
ATOM 15 C8 G B 6 -109.893 25.166 -6.584 1.00 24.18 C
ATOM 16 N7 G B 6 -110.049 26.050 -5.643 1.00 24.18 N
ATOM 17 C5 G B 6 -111.410 26.280 -5.622 1.00 24.18 C
ATOM 18 C6 G B 6 -112.164 27.121 -4.803 1.00 24.18 C
ATOM 19 O6 G B 6 -111.776 27.844 -3.888 1.00 24.18 O
ATOM 20 N1 G B 6 -113.511 27.067 -5.121 1.00 24.18 N
ATOM 21 C2 G B 6 -114.056 26.287 -6.106 1.00 24.18 C
ATOM 22 N2 G B 6 -115.384 26.373 -6.267 1.00 24.18 N
ATOM 23 N3 G B 6 -113.355 25.482 -6.872 1.00 24.18 N
ATOM 24 C4 G B 6 -112.049 25.528 -6.576 1.00 24.18 C
ATOM 25 P U B 7 -110.234 23.399 -12.665 1.00 62.50 P
ATOM 26 OP1 U B 7 -109.070 24.323 -12.786 1.00 86.19 O
ATOM 27 OP2 U B 7 -111.621 23.918 -12.812 1.00 86.19 O
ATOM 28 O5' U B 7 -110.056 22.217 -13.706 1.00 15.44 O
TER
Atoms:
C2: (-100.385,27.107,-9.053)
OP1: (-104.899,28.179,-15.374)
OP2: (-105.719,27.138,-13.171)
C4: (-102.207,25.764,-8.481)
O5': (-103.388,28.097,-13.411)
C3': (-100.245,27.792,-13.133)
C1': (-100.501,28.686,-10.971)
O4': (-101.491,29.258,-11.819)
C5': (-102.403,28.921,-14.042)
P: (-104.912,28.165,-13.885)
O2: (-99.223,27.499,-8.873)
C4': (-101.146,29.012,-13.207)
C2': (-99.433,28.074,-11.875)
O2': (-98.370,28.997,-12.088)
N1: (-101.134,27.658,-10.111)
N3: (-100.950,26.160,-8.258)
N4: (-102.730,24.842,-7.663)
C6: (-102.418,27.237,-10.331)
C5: (-102.987,26.300,-9.549)
O3': (-99.410,27.652,-14.259)
OP1: (-104.899,28.179,-15.374)
OP2: (-105.719,27.138,-13.171)
C4: (-102.207,25.764,-8.481)
O5': (-103.388,28.097,-13.411)
C3': (-100.245,27.792,-13.133)
C1': (-100.501,28.686,-10.971)
O4': (-101.491,29.258,-11.819)
C5': (-102.403,28.921,-14.042)
P: (-104.912,28.165,-13.885)
O2: (-99.223,27.499,-8.873)
C4': (-101.146,29.012,-13.207)
C2': (-99.433,28.074,-11.875)
O2': (-98.370,28.997,-12.088)
N1: (-101.134,27.658,-10.111)
N3: (-100.950,26.160,-8.258)
N4: (-102.730,24.842,-7.663)
C6: (-102.418,27.237,-10.331)
C5: (-102.987,26.300,-9.549)
O3': (-99.410,27.652,-14.259)
OP1: (-105.354,21.709,-8.945)
OP2: (-105.534,23.696,-7.324)
C3': (-109.934,23.288,-10.057)
C1': (-111.275,23.708,-8.128)
C5': (-108.417,21.644,-8.794)
O6: (-111.776,27.844,-3.888)
O4': (-110.375,22.665,-7.827)
C8: (-109.893,25.166,-6.584)
C2: (-114.056,26.287,-6.106)
C6: (-112.164,27.121,-4.803)
C5: (-111.410,26.280,-5.622)
C4: (-112.049,25.528,-6.576)
P: (-106.084,22.421,-7.861)
C4': (-109.809,22.159,-9.048)
C2': (-111.212,24.014,-9.628)
O2': (-112.375,23.483,-10.243)
N1: (-113.511,27.067,-5.121)
N2: (-115.384,26.373,-6.267)
N3: (-113.355,25.482,-6.872)
N7: (-110.049,26.050,-5.643)
N9: (-111.075,24.777,-7.157)
O5': (-107.566,22.711,-8.362)
O3': (-110.117,22.604,-11.282)
OP2: (-105.534,23.696,-7.324)
C3': (-109.934,23.288,-10.057)
C1': (-111.275,23.708,-8.128)
C5': (-108.417,21.644,-8.794)
O6: (-111.776,27.844,-3.888)
O4': (-110.375,22.665,-7.827)
C8: (-109.893,25.166,-6.584)
C2: (-114.056,26.287,-6.106)
C6: (-112.164,27.121,-4.803)
C5: (-111.410,26.280,-5.622)
C4: (-112.049,25.528,-6.576)
P: (-106.084,22.421,-7.861)
C4': (-109.809,22.159,-9.048)
C2': (-111.212,24.014,-9.628)
O2': (-112.375,23.483,-10.243)
N1: (-113.511,27.067,-5.121)
N2: (-115.384,26.373,-6.267)
N3: (-113.355,25.482,-6.872)
N7: (-110.049,26.050,-5.643)
N9: (-111.075,24.777,-7.157)
O5': (-107.566,22.711,-8.362)
O3': (-110.117,22.604,-11.282)
Image (generated by PyMOL):