Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A573:A582
Extra
PDB:
ATOM 1 O3' G A 572 -88.528 -88.645 14.431 1.00 5.48 O
ATOM 2 P C A 573 -89.173 -88.095 15.773 1.00 24.72 P
ATOM 3 OP1 C A 573 -89.838 -89.261 16.385 1.00 32.04 O
ATOM 4 OP2 C A 573 -89.969 -86.888 15.453 1.00 32.04 O
ATOM 5 O5' C A 573 -87.906 -87.682 16.645 1.00 1.76 O
ATOM 6 C5' C A 573 -87.241 -88.652 17.467 1.00 1.76 C
ATOM 7 C4' C A 573 -86.357 -87.979 18.501 1.00 1.76 C
ATOM 8 O4' C A 573 -85.179 -87.420 17.868 1.00 1.76 O
ATOM 9 C3' C A 573 -86.935 -86.835 19.307 1.00 1.76 C
ATOM 10 O3' C A 573 -87.666 -87.281 20.412 1.00 1.76 O
ATOM 11 C2' C A 573 -85.682 -86.121 19.773 1.00 1.76 C
ATOM 12 O2' C A 573 -85.066 -86.839 20.828 1.00 1.76 O
ATOM 13 C1' C A 573 -84.787 -86.235 18.539 1.00 1.76 C
ATOM 14 N1 C A 573 -84.932 -85.094 17.594 1.00 26.85 N
ATOM 15 C2 C A 573 -84.246 -83.887 17.840 1.00 26.85 C
ATOM 16 O2 C A 573 -83.529 -83.790 18.835 1.00 26.85 O
ATOM 17 N3 C A 573 -84.388 -82.860 16.982 1.00 26.85 N
ATOM 18 C4 C A 573 -85.170 -82.993 15.916 1.00 26.85 C
ATOM 19 N4 C A 573 -85.284 -81.960 15.095 1.00 26.85 N
ATOM 20 C5 C A 573 -85.874 -84.195 15.640 1.00 26.85 C
ATOM 21 C6 C A 573 -85.730 -85.209 16.493 1.00 26.85 C
ATOM 22 P C A 574 -88.704 -86.287 21.109 1.00 4.21 P
ATOM 23 OP1 C A 574 -89.204 -86.949 22.330 1.00 4.21 O
ATOM 24 OP2 C A 574 -89.682 -85.827 20.090 1.00 4.21 O
ATOM 25 O5' C A 574 -87.792 -85.061 21.546 1.00 4.96 O
TER
ATOM 1 O3' A B 581 -88.418 -82.304 11.733 1.00 0.79 O
ATOM 2 P G B 582 -88.629 -81.441 13.071 1.00 3.07 P
ATOM 3 OP1 G B 582 -87.307 -80.790 13.314 1.00 13.58 O
ATOM 4 OP2 G B 582 -89.255 -82.270 14.129 1.00 13.58 O
ATOM 5 O5' G B 582 -89.718 -80.350 12.635 1.00 0.79 O
ATOM 6 C5' G B 582 -89.322 -79.096 12.029 1.00 0.79 C
ATOM 7 C4' G B 582 -88.999 -79.303 10.573 1.00 0.79 C
ATOM 8 O4' G B 582 -90.182 -79.802 9.913 1.00 0.79 O
ATOM 9 C3' G B 582 -88.522 -78.099 9.775 1.00 0.79 C
ATOM 10 O3' G B 582 -87.456 -78.507 8.933 1.00 0.79 O
ATOM 11 C2' G B 582 -89.745 -77.703 8.948 1.00 0.79 C
ATOM 12 O2' G B 582 -89.379 -77.214 7.676 1.00 0.79 O
ATOM 13 C1' G B 582 -90.466 -79.031 8.773 1.00 0.79 C
ATOM 14 N9 G B 582 -91.912 -78.903 8.695 1.00 7.92 N
ATOM 15 C8 G B 582 -92.826 -79.563 9.477 1.00 7.92 C
ATOM 16 N7 G B 582 -94.058 -79.272 9.179 1.00 7.92 N
ATOM 17 C5 G B 582 -93.951 -78.362 8.139 1.00 7.92 C
ATOM 18 C6 G B 582 -94.955 -77.691 7.412 1.00 7.92 C
ATOM 19 O6 G B 582 -96.184 -77.763 7.553 1.00 7.92 O
ATOM 20 N1 G B 582 -94.415 -76.858 6.441 1.00 7.92 N
ATOM 21 C2 G B 582 -93.080 -76.686 6.209 1.00 7.92 C
ATOM 22 N2 G B 582 -92.760 -75.837 5.226 1.00 7.92 N
ATOM 23 N3 G B 582 -92.127 -77.300 6.891 1.00 7.92 N
ATOM 24 C4 G B 582 -92.633 -78.121 7.831 1.00 7.92 C
ATOM 25 P C B 583 -85.964 -78.023 9.265 1.00 11.46 P
ATOM 26 OP1 C B 583 -85.028 -78.747 8.355 1.00 24.98 O
ATOM 27 OP2 C B 583 -85.765 -78.105 10.752 1.00 24.98 O
ATOM 28 O5' C B 583 -86.004 -76.485 8.847 1.00 9.12 O
TER
ATOM 2 P C A 573 -89.173 -88.095 15.773 1.00 24.72 P
ATOM 3 OP1 C A 573 -89.838 -89.261 16.385 1.00 32.04 O
ATOM 4 OP2 C A 573 -89.969 -86.888 15.453 1.00 32.04 O
ATOM 5 O5' C A 573 -87.906 -87.682 16.645 1.00 1.76 O
ATOM 6 C5' C A 573 -87.241 -88.652 17.467 1.00 1.76 C
ATOM 7 C4' C A 573 -86.357 -87.979 18.501 1.00 1.76 C
ATOM 8 O4' C A 573 -85.179 -87.420 17.868 1.00 1.76 O
ATOM 9 C3' C A 573 -86.935 -86.835 19.307 1.00 1.76 C
ATOM 10 O3' C A 573 -87.666 -87.281 20.412 1.00 1.76 O
ATOM 11 C2' C A 573 -85.682 -86.121 19.773 1.00 1.76 C
ATOM 12 O2' C A 573 -85.066 -86.839 20.828 1.00 1.76 O
ATOM 13 C1' C A 573 -84.787 -86.235 18.539 1.00 1.76 C
ATOM 14 N1 C A 573 -84.932 -85.094 17.594 1.00 26.85 N
ATOM 15 C2 C A 573 -84.246 -83.887 17.840 1.00 26.85 C
ATOM 16 O2 C A 573 -83.529 -83.790 18.835 1.00 26.85 O
ATOM 17 N3 C A 573 -84.388 -82.860 16.982 1.00 26.85 N
ATOM 18 C4 C A 573 -85.170 -82.993 15.916 1.00 26.85 C
ATOM 19 N4 C A 573 -85.284 -81.960 15.095 1.00 26.85 N
ATOM 20 C5 C A 573 -85.874 -84.195 15.640 1.00 26.85 C
ATOM 21 C6 C A 573 -85.730 -85.209 16.493 1.00 26.85 C
ATOM 22 P C A 574 -88.704 -86.287 21.109 1.00 4.21 P
ATOM 23 OP1 C A 574 -89.204 -86.949 22.330 1.00 4.21 O
ATOM 24 OP2 C A 574 -89.682 -85.827 20.090 1.00 4.21 O
ATOM 25 O5' C A 574 -87.792 -85.061 21.546 1.00 4.96 O
TER
ATOM 1 O3' A B 581 -88.418 -82.304 11.733 1.00 0.79 O
ATOM 2 P G B 582 -88.629 -81.441 13.071 1.00 3.07 P
ATOM 3 OP1 G B 582 -87.307 -80.790 13.314 1.00 13.58 O
ATOM 4 OP2 G B 582 -89.255 -82.270 14.129 1.00 13.58 O
ATOM 5 O5' G B 582 -89.718 -80.350 12.635 1.00 0.79 O
ATOM 6 C5' G B 582 -89.322 -79.096 12.029 1.00 0.79 C
ATOM 7 C4' G B 582 -88.999 -79.303 10.573 1.00 0.79 C
ATOM 8 O4' G B 582 -90.182 -79.802 9.913 1.00 0.79 O
ATOM 9 C3' G B 582 -88.522 -78.099 9.775 1.00 0.79 C
ATOM 10 O3' G B 582 -87.456 -78.507 8.933 1.00 0.79 O
ATOM 11 C2' G B 582 -89.745 -77.703 8.948 1.00 0.79 C
ATOM 12 O2' G B 582 -89.379 -77.214 7.676 1.00 0.79 O
ATOM 13 C1' G B 582 -90.466 -79.031 8.773 1.00 0.79 C
ATOM 14 N9 G B 582 -91.912 -78.903 8.695 1.00 7.92 N
ATOM 15 C8 G B 582 -92.826 -79.563 9.477 1.00 7.92 C
ATOM 16 N7 G B 582 -94.058 -79.272 9.179 1.00 7.92 N
ATOM 17 C5 G B 582 -93.951 -78.362 8.139 1.00 7.92 C
ATOM 18 C6 G B 582 -94.955 -77.691 7.412 1.00 7.92 C
ATOM 19 O6 G B 582 -96.184 -77.763 7.553 1.00 7.92 O
ATOM 20 N1 G B 582 -94.415 -76.858 6.441 1.00 7.92 N
ATOM 21 C2 G B 582 -93.080 -76.686 6.209 1.00 7.92 C
ATOM 22 N2 G B 582 -92.760 -75.837 5.226 1.00 7.92 N
ATOM 23 N3 G B 582 -92.127 -77.300 6.891 1.00 7.92 N
ATOM 24 C4 G B 582 -92.633 -78.121 7.831 1.00 7.92 C
ATOM 25 P C B 583 -85.964 -78.023 9.265 1.00 11.46 P
ATOM 26 OP1 C B 583 -85.028 -78.747 8.355 1.00 24.98 O
ATOM 27 OP2 C B 583 -85.765 -78.105 10.752 1.00 24.98 O
ATOM 28 O5' C B 583 -86.004 -76.485 8.847 1.00 9.12 O
TER
Atoms:
C2: (-84.246,-83.887,17.840)
OP1: (-89.838,-89.261,16.385)
OP2: (-89.969,-86.888,15.453)
C4: (-85.170,-82.993,15.916)
O5': (-87.906,-87.682,16.645)
C3': (-86.935,-86.835,19.307)
C1': (-84.787,-86.235,18.539)
O4': (-85.179,-87.420,17.868)
C5': (-87.241,-88.652,17.467)
P: (-89.173,-88.095,15.773)
O2: (-83.529,-83.790,18.835)
C4': (-86.357,-87.979,18.501)
C2': (-85.682,-86.121,19.773)
O2': (-85.066,-86.839,20.828)
N1: (-84.932,-85.094,17.594)
N3: (-84.388,-82.860,16.982)
N4: (-85.284,-81.960,15.095)
C6: (-85.730,-85.209,16.493)
C5: (-85.874,-84.195,15.640)
O3': (-87.666,-87.281,20.412)
OP1: (-89.838,-89.261,16.385)
OP2: (-89.969,-86.888,15.453)
C4: (-85.170,-82.993,15.916)
O5': (-87.906,-87.682,16.645)
C3': (-86.935,-86.835,19.307)
C1': (-84.787,-86.235,18.539)
O4': (-85.179,-87.420,17.868)
C5': (-87.241,-88.652,17.467)
P: (-89.173,-88.095,15.773)
O2: (-83.529,-83.790,18.835)
C4': (-86.357,-87.979,18.501)
C2': (-85.682,-86.121,19.773)
O2': (-85.066,-86.839,20.828)
N1: (-84.932,-85.094,17.594)
N3: (-84.388,-82.860,16.982)
N4: (-85.284,-81.960,15.095)
C6: (-85.730,-85.209,16.493)
C5: (-85.874,-84.195,15.640)
O3': (-87.666,-87.281,20.412)
OP1: (-87.307,-80.790,13.314)
OP2: (-89.255,-82.270,14.129)
C3': (-88.522,-78.099,9.775)
C1': (-90.466,-79.031,8.773)
C5': (-89.322,-79.096,12.029)
O6: (-96.184,-77.763,7.553)
O4': (-90.182,-79.802,9.913)
C8: (-92.826,-79.563,9.477)
C2: (-93.080,-76.686,6.209)
C6: (-94.955,-77.691,7.412)
C5: (-93.951,-78.362,8.139)
C4: (-92.633,-78.121,7.831)
P: (-88.629,-81.441,13.071)
C4': (-88.999,-79.303,10.573)
C2': (-89.745,-77.703,8.948)
O2': (-89.379,-77.214,7.676)
N1: (-94.415,-76.858,6.441)
N2: (-92.760,-75.837,5.226)
N3: (-92.127,-77.300,6.891)
N7: (-94.058,-79.272,9.179)
N9: (-91.912,-78.903,8.695)
O5': (-89.718,-80.350,12.635)
O3': (-87.456,-78.507,8.933)
OP2: (-89.255,-82.270,14.129)
C3': (-88.522,-78.099,9.775)
C1': (-90.466,-79.031,8.773)
C5': (-89.322,-79.096,12.029)
O6: (-96.184,-77.763,7.553)
O4': (-90.182,-79.802,9.913)
C8: (-92.826,-79.563,9.477)
C2: (-93.080,-76.686,6.209)
C6: (-94.955,-77.691,7.412)
C5: (-93.951,-78.362,8.139)
C4: (-92.633,-78.121,7.831)
P: (-88.629,-81.441,13.071)
C4': (-88.999,-79.303,10.573)
C2': (-89.745,-77.703,8.948)
O2': (-89.379,-77.214,7.676)
N1: (-94.415,-76.858,6.441)
N2: (-92.760,-75.837,5.226)
N3: (-92.127,-77.300,6.891)
N7: (-94.058,-79.272,9.179)
N9: (-91.912,-78.903,8.695)
O5': (-89.718,-80.350,12.635)
O3': (-87.456,-78.507,8.933)
Image (generated by PyMOL):