Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:H2:H1
Extra
PDB:
ATOM 1 O3' C A 1 4.450 35.779 -9.554 1.00 45.13 O
ATOM 2 P U A 2 4.504 36.066 -7.974 1.00 46.88 P
ATOM 3 OP1 U A 2 4.451 37.554 -7.848 1.00 52.19 O
ATOM 4 OP2 U A 2 5.594 35.272 -7.309 1.00 39.27 O
ATOM 5 O5' U A 2 3.137 35.499 -7.430 1.00 35.96 O
ATOM 6 C5' U A 2 1.935 36.072 -7.845 1.00 40.10 C
ATOM 7 C4' U A 2 0.821 35.252 -7.313 1.00 41.95 C
ATOM 8 O4' U A 2 0.896 33.926 -7.903 1.00 42.58 O
ATOM 9 C3' U A 2 0.965 34.936 -5.841 1.00 49.57 C
ATOM 10 O3' U A 2 0.632 36.058 -5.037 1.00 44.20 O
ATOM 11 C2' U A 2 0.018 33.751 -5.728 1.00 37.14 C
ATOM 12 O2' U A 2 -1.332 34.124 -5.908 1.00 35.18 O
ATOM 13 C1' U A 2 0.409 32.974 -6.977 1.00 32.09 C
ATOM 14 N1 U A 2 1.451 31.974 -6.736 1.00 25.37 N
ATOM 15 C2 U A 2 1.038 30.774 -6.215 1.00 31.80 C
ATOM 16 O2 U A 2 -0.112 30.576 -5.891 1.00 45.08 O
ATOM 17 N3 U A 2 2.021 29.828 -6.073 1.00 34.26 N
ATOM 18 C4 U A 2 3.368 29.993 -6.370 1.00 31.14 C
ATOM 19 O4 U A 2 4.140 29.059 -6.194 1.00 34.89 O
ATOM 20 C5 U A 2 3.724 31.289 -6.866 1.00 21.18 C
ATOM 21 C6 U A 2 2.779 32.214 -7.032 1.00 22.18 C
ATOM 22 P G A 3 1.242 36.184 -3.561 1.00 60.30 P
ATOM 23 OP1 G A 3 0.619 37.372 -2.936 1.00 66.61 O
ATOM 24 OP2 G A 3 2.732 36.075 -3.617 1.00 49.13 O
ATOM 25 O5' G A 3 0.677 34.915 -2.812 1.00 40.72 O
TER
ATOM 1 P C B 1 8.845 33.394 -10.534 1.00 52.04 P
ATOM 2 OP1 C B 1 9.396 34.761 -10.367 1.00 56.62 O
ATOM 3 OP2 C B 1 9.216 32.318 -9.590 1.00 46.02 O
ATOM 4 O5' C B 1 7.270 33.568 -10.638 1.00 42.70 O
ATOM 5 C5' C B 1 6.723 34.621 -11.421 1.00 34.81 C
ATOM 6 C4' C B 1 5.230 34.516 -11.425 1.00 35.79 C
ATOM 7 O4' C B 1 4.855 33.231 -11.989 1.00 31.08 O
ATOM 8 C3' C B 1 4.639 34.468 -10.033 1.00 36.16 C
ATOM 9 O3' C B 1 4.450 35.779 -9.554 1.00 45.13 O
ATOM 10 C2' C B 1 3.313 33.782 -10.281 1.00 35.33 C
ATOM 11 O2' C B 1 2.378 34.671 -10.869 1.00 40.68 O
ATOM 12 C1' C B 1 3.728 32.723 -11.300 1.00 29.13 C
ATOM 13 N1 C B 1 4.114 31.439 -10.701 1.00 38.39 N
ATOM 14 C2 C B 1 3.121 30.564 -10.297 1.00 30.05 C
ATOM 15 O2 C B 1 1.937 30.937 -10.373 1.00 41.71 O
ATOM 16 N3 C B 1 3.467 29.342 -9.833 1.00 29.60 N
ATOM 17 C4 C B 1 4.755 29.008 -9.753 1.00 35.05 C
ATOM 18 N4 C B 1 5.071 27.805 -9.313 1.00 39.32 N
ATOM 19 C5 C B 1 5.788 29.903 -10.124 1.00 44.87 C
ATOM 20 C6 C B 1 5.428 31.099 -10.583 1.00 30.14 C
ATOM 21 P U B 2 4.504 36.066 -7.974 1.00 46.88 P
ATOM 22 OP1 U B 2 4.451 37.554 -7.848 1.00 52.19 O
ATOM 23 OP2 U B 2 5.594 35.272 -7.309 1.00 39.27 O
ATOM 24 O5' U B 2 3.137 35.499 -7.430 1.00 35.96 O
TER
ATOM 2 P U A 2 4.504 36.066 -7.974 1.00 46.88 P
ATOM 3 OP1 U A 2 4.451 37.554 -7.848 1.00 52.19 O
ATOM 4 OP2 U A 2 5.594 35.272 -7.309 1.00 39.27 O
ATOM 5 O5' U A 2 3.137 35.499 -7.430 1.00 35.96 O
ATOM 6 C5' U A 2 1.935 36.072 -7.845 1.00 40.10 C
ATOM 7 C4' U A 2 0.821 35.252 -7.313 1.00 41.95 C
ATOM 8 O4' U A 2 0.896 33.926 -7.903 1.00 42.58 O
ATOM 9 C3' U A 2 0.965 34.936 -5.841 1.00 49.57 C
ATOM 10 O3' U A 2 0.632 36.058 -5.037 1.00 44.20 O
ATOM 11 C2' U A 2 0.018 33.751 -5.728 1.00 37.14 C
ATOM 12 O2' U A 2 -1.332 34.124 -5.908 1.00 35.18 O
ATOM 13 C1' U A 2 0.409 32.974 -6.977 1.00 32.09 C
ATOM 14 N1 U A 2 1.451 31.974 -6.736 1.00 25.37 N
ATOM 15 C2 U A 2 1.038 30.774 -6.215 1.00 31.80 C
ATOM 16 O2 U A 2 -0.112 30.576 -5.891 1.00 45.08 O
ATOM 17 N3 U A 2 2.021 29.828 -6.073 1.00 34.26 N
ATOM 18 C4 U A 2 3.368 29.993 -6.370 1.00 31.14 C
ATOM 19 O4 U A 2 4.140 29.059 -6.194 1.00 34.89 O
ATOM 20 C5 U A 2 3.724 31.289 -6.866 1.00 21.18 C
ATOM 21 C6 U A 2 2.779 32.214 -7.032 1.00 22.18 C
ATOM 22 P G A 3 1.242 36.184 -3.561 1.00 60.30 P
ATOM 23 OP1 G A 3 0.619 37.372 -2.936 1.00 66.61 O
ATOM 24 OP2 G A 3 2.732 36.075 -3.617 1.00 49.13 O
ATOM 25 O5' G A 3 0.677 34.915 -2.812 1.00 40.72 O
TER
ATOM 1 P C B 1 8.845 33.394 -10.534 1.00 52.04 P
ATOM 2 OP1 C B 1 9.396 34.761 -10.367 1.00 56.62 O
ATOM 3 OP2 C B 1 9.216 32.318 -9.590 1.00 46.02 O
ATOM 4 O5' C B 1 7.270 33.568 -10.638 1.00 42.70 O
ATOM 5 C5' C B 1 6.723 34.621 -11.421 1.00 34.81 C
ATOM 6 C4' C B 1 5.230 34.516 -11.425 1.00 35.79 C
ATOM 7 O4' C B 1 4.855 33.231 -11.989 1.00 31.08 O
ATOM 8 C3' C B 1 4.639 34.468 -10.033 1.00 36.16 C
ATOM 9 O3' C B 1 4.450 35.779 -9.554 1.00 45.13 O
ATOM 10 C2' C B 1 3.313 33.782 -10.281 1.00 35.33 C
ATOM 11 O2' C B 1 2.378 34.671 -10.869 1.00 40.68 O
ATOM 12 C1' C B 1 3.728 32.723 -11.300 1.00 29.13 C
ATOM 13 N1 C B 1 4.114 31.439 -10.701 1.00 38.39 N
ATOM 14 C2 C B 1 3.121 30.564 -10.297 1.00 30.05 C
ATOM 15 O2 C B 1 1.937 30.937 -10.373 1.00 41.71 O
ATOM 16 N3 C B 1 3.467 29.342 -9.833 1.00 29.60 N
ATOM 17 C4 C B 1 4.755 29.008 -9.753 1.00 35.05 C
ATOM 18 N4 C B 1 5.071 27.805 -9.313 1.00 39.32 N
ATOM 19 C5 C B 1 5.788 29.903 -10.124 1.00 44.87 C
ATOM 20 C6 C B 1 5.428 31.099 -10.583 1.00 30.14 C
ATOM 21 P U B 2 4.504 36.066 -7.974 1.00 46.88 P
ATOM 22 OP1 U B 2 4.451 37.554 -7.848 1.00 52.19 O
ATOM 23 OP2 U B 2 5.594 35.272 -7.309 1.00 39.27 O
ATOM 24 O5' U B 2 3.137 35.499 -7.430 1.00 35.96 O
TER
Atoms:
C4: (3.368,29.993,-6.370)
N3: (2.021,29.828,-6.073)
OP1: (4.451,37.554,-7.848)
OP2: (5.594,35.272,-7.309)
C2: (1.038,30.774,-6.215)
C1': (0.409,32.974,-6.977)
C3': (0.965,34.936,-5.841)
O5': (3.137,35.499,-7.430)
O4': (0.896,33.926,-7.903)
C5': (1.935,36.072,-7.845)
P: (4.504,36.066,-7.974)
C4': (0.821,35.252,-7.313)
C2': (0.018,33.751,-5.728)
O2': (-1.332,34.124,-5.908)
N1: (1.451,31.974,-6.736)
O4: (4.140,29.059,-6.194)
O2: (-0.112,30.576,-5.891)
C6: (2.779,32.214,-7.032)
C5: (3.724,31.289,-6.866)
O3': (0.632,36.058,-5.037)
N3: (2.021,29.828,-6.073)
OP1: (4.451,37.554,-7.848)
OP2: (5.594,35.272,-7.309)
C2: (1.038,30.774,-6.215)
C1': (0.409,32.974,-6.977)
C3': (0.965,34.936,-5.841)
O5': (3.137,35.499,-7.430)
O4': (0.896,33.926,-7.903)
C5': (1.935,36.072,-7.845)
P: (4.504,36.066,-7.974)
C4': (0.821,35.252,-7.313)
C2': (0.018,33.751,-5.728)
O2': (-1.332,34.124,-5.908)
N1: (1.451,31.974,-6.736)
O4: (4.140,29.059,-6.194)
O2: (-0.112,30.576,-5.891)
C6: (2.779,32.214,-7.032)
C5: (3.724,31.289,-6.866)
O3': (0.632,36.058,-5.037)
C2: (3.121,30.564,-10.297)
OP1: (9.396,34.761,-10.367)
OP2: (9.216,32.318,-9.590)
C4: (4.755,29.008,-9.753)
O5': (7.270,33.568,-10.638)
C3': (4.639,34.468,-10.033)
C1': (3.728,32.723,-11.300)
O4': (4.855,33.231,-11.989)
C5': (6.723,34.621,-11.421)
P: (8.845,33.394,-10.534)
O2: (1.937,30.937,-10.373)
C4': (5.230,34.516,-11.425)
C2': (3.313,33.782,-10.281)
O2': (2.378,34.671,-10.869)
N1: (4.114,31.439,-10.701)
N3: (3.467,29.342,-9.833)
N4: (5.071,27.805,-9.313)
C6: (5.428,31.099,-10.583)
C5: (5.788,29.903,-10.124)
O3': (4.450,35.779,-9.554)
OP1: (9.396,34.761,-10.367)
OP2: (9.216,32.318,-9.590)
C4: (4.755,29.008,-9.753)
O5': (7.270,33.568,-10.638)
C3': (4.639,34.468,-10.033)
C1': (3.728,32.723,-11.300)
O4': (4.855,33.231,-11.989)
C5': (6.723,34.621,-11.421)
P: (8.845,33.394,-10.534)
O2: (1.937,30.937,-10.373)
C4': (5.230,34.516,-11.425)
C2': (3.313,33.782,-10.281)
O2': (2.378,34.671,-10.869)
N1: (4.114,31.439,-10.701)
N3: (3.467,29.342,-9.833)
N4: (5.071,27.805,-9.313)
C6: (5.428,31.099,-10.583)
C5: (5.788,29.903,-10.124)
O3': (4.450,35.779,-9.554)
Image (generated by PyMOL):