ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A362:A378

Extra

PDB:
ATOM 1 O3' G A 361 -13.332 19.220 108.450 1.00 48.37 O
ATOM 2 P C A 362 -12.760 18.993 109.932 1.00 78.05 P
ATOM 3 OP1 C A 362 -12.213 17.616 110.013 1.00 79.06 O
ATOM 4 OP2 C A 362 -13.807 19.412 110.890 1.00 60.42 O
ATOM 5 O5' C A 362 -11.562 20.058 110.030 1.00 52.54 O
ATOM 6 C5' C A 362 -10.277 19.826 109.454 1.00 58.80 C
ATOM 7 C4' C A 362 -10.322 19.691 107.940 1.00 58.36 C
ATOM 8 O4' C A 362 -10.794 20.925 107.350 1.00 54.37 O
ATOM 9 C3' C A 362 -8.964 19.447 107.299 1.00 73.11 C
ATOM 10 O3' C A 362 -9.094 18.809 106.054 1.00 83.57 O
ATOM 11 C2' C A 362 -8.455 20.851 107.036 1.00 59.44 C
ATOM 12 O2' C A 362 -7.567 20.852 105.938 1.00 57.40 O
ATOM 13 C1' C A 362 -9.742 21.563 106.641 1.00 66.26 C
ATOM 14 N1 C A 362 -9.687 23.028 106.966 1.00 66.88 N
ATOM 15 C2 C A 362 -9.127 23.947 106.064 1.00 59.48 C
ATOM 16 O2 C A 362 -8.677 23.562 104.981 1.00 56.07 O
ATOM 17 N3 C A 362 -9.093 25.256 106.400 1.00 60.85 N
ATOM 18 C4 C A 362 -9.578 25.656 107.576 1.00 67.97 C
ATOM 19 N4 C A 362 -9.519 26.957 107.875 1.00 66.36 N
ATOM 20 C5 C A 362 -10.149 24.741 108.505 1.00 65.33 C
ATOM 21 C6 C A 362 -10.179 23.453 108.162 1.00 64.56 C
ATOM 22 P A A 363 -9.329 17.237 105.929 1.00 61.93 P
ATOM 23 OP1 A A 363 -10.650 16.919 106.531 1.00 48.63 O
ATOM 24 OP2 A A 363 -8.119 16.544 106.424 1.00 36.97 O
ATOM 25 O5' A A 363 -9.388 17.114 104.332 1.00 53.77 O
TER

ATOM 1 O3' U B 377 -8.322 29.145 111.394 1.00 51.62 O
ATOM 2 P G B 378 -9.800 28.707 111.842 1.00 56.12 P
ATOM 3 OP1 G B 378 -9.848 28.561 113.318 1.00 60.30 O
ATOM 4 OP2 G B 378 -10.231 27.580 110.974 1.00 61.00 O
ATOM 5 O5' G B 378 -10.630 30.008 111.427 1.00 59.81 O
ATOM 6 C5' G B 378 -10.551 30.398 110.075 1.00 66.41 C
ATOM 7 C4' G B 378 -11.612 31.409 109.714 1.00 49.89 C
ATOM 8 O4' G B 378 -12.871 31.080 110.346 1.00 50.91 O
ATOM 9 C3' G B 378 -11.319 32.805 110.199 1.00 49.80 C
ATOM 10 O3' G B 378 -12.068 33.638 109.374 1.00 45.54 O
ATOM 11 C2' G B 378 -11.908 32.795 111.596 1.00 49.37 C
ATOM 12 O2' G B 378 -12.183 34.103 112.045 1.00 46.70 O
ATOM 13 C1' G B 378 -13.205 32.071 111.293 1.00 50.90 C
ATOM 14 N9 G B 378 -13.799 31.381 112.426 1.00 51.85 N
ATOM 15 C8 G B 378 -13.172 30.601 113.362 1.00 55.58 C
ATOM 16 N7 G B 378 -13.989 30.108 114.250 1.00 54.10 N
ATOM 17 C5 G B 378 -15.232 30.590 113.874 1.00 55.45 C
ATOM 18 C6 G B 378 -16.499 30.390 114.460 1.00 60.44 C
ATOM 19 O6 G B 378 -16.782 29.722 115.464 1.00 57.60 O
ATOM 20 N1 G B 378 -17.490 31.069 113.750 1.00 63.35 N
ATOM 21 C2 G B 378 -17.286 31.835 112.620 1.00 58.61 C
ATOM 22 N2 G B 378 -18.367 32.410 112.072 1.00 64.18 N
ATOM 23 N3 G B 378 -16.100 32.027 112.062 1.00 48.73 N
ATOM 24 C4 G B 378 -15.130 31.375 112.747 1.00 52.90 C
ATOM 25 P A B 379 -11.407 34.986 108.851 1.00 37.31 P
ATOM 26 OP1 A B 379 -10.420 35.411 109.883 1.00 42.19 O
ATOM 27 OP2 A B 379 -12.531 35.864 108.452 1.00 44.51 O
ATOM 28 O5' A B 379 -10.630 34.555 107.502 1.00 39.93 O
TER

Atoms:
C2: (-9.127,23.947,106.064)
OP1: (-12.213,17.616,110.013)
OP2: (-13.807,19.412,110.890)
C4: (-9.578,25.656,107.576)
O5': (-11.562,20.058,110.030)
C3': (-8.964,19.447,107.299)
C1': (-9.742,21.563,106.641)
O4': (-10.794,20.925,107.350)
C5': (-10.277,19.826,109.454)
P: (-12.760,18.993,109.932)
O2: (-8.677,23.562,104.981)
C4': (-10.322,19.691,107.940)
C2': (-8.455,20.851,107.036)
O2': (-7.567,20.852,105.938)
N1: (-9.687,23.028,106.966)
N3: (-9.093,25.256,106.400)
N4: (-9.519,26.957,107.875)
C6: (-10.179,23.453,108.162)
C5: (-10.149,24.741,108.505)
O3': (-9.094,18.809,106.054)
OP1: (-9.848,28.561,113.318)
OP2: (-10.231,27.580,110.974)
C3': (-11.319,32.805,110.199)
C1': (-13.205,32.071,111.293)
C5': (-10.551,30.398,110.075)
O6: (-16.782,29.722,115.464)
O4': (-12.871,31.080,110.346)
C8: (-13.172,30.601,113.362)
C2: (-17.286,31.835,112.620)
C6: (-16.499,30.390,114.460)
C5: (-15.232,30.590,113.874)
C4: (-15.130,31.375,112.747)
P: (-9.800,28.707,111.842)
C4': (-11.612,31.409,109.714)
C2': (-11.908,32.795,111.596)
O2': (-12.183,34.103,112.045)
N1: (-17.490,31.069,113.750)
N2: (-18.367,32.410,112.072)
N3: (-16.100,32.027,112.062)
N7: (-13.989,30.108,114.250)
N9: (-13.799,31.381,112.426)
O5': (-10.630,30.008,111.427)
O3': (-12.068,33.638,109.374)
Image (generated by PyMOL):
PyMOL image
show in jmol