Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A1370:V5
Extra
PDB:
ATOM 1 O3' G A1369 105.203 28.247 14.541 1.00 66.59 O
ATOM 2 P C A1370 104.413 26.881 14.835 1.00 68.37 P
ATOM 3 OP1 C A1370 104.225 26.861 16.313 1.00 59.93 O
ATOM 4 OP2 C A1370 105.160 25.766 14.163 1.00 63.48 O
ATOM 5 O5' C A1370 102.969 27.095 14.202 1.00 64.86 O
ATOM 6 C5' C A1370 101.993 27.887 14.873 1.00 58.71 C
ATOM 7 C4' C A1370 100.738 28.031 14.038 1.00 62.14 C
ATOM 8 O4' C A1370 101.106 28.330 12.666 1.00 60.44 O
ATOM 9 C3' C A1370 99.815 26.822 13.933 1.00 63.70 C
ATOM 10 O3' C A1370 98.919 26.772 15.040 1.00 60.21 O
ATOM 11 C2' C A1370 99.073 27.076 12.622 1.00 63.47 C
ATOM 12 O2' C A1370 97.945 27.913 12.741 1.00 62.21 O
ATOM 13 C1' C A1370 100.137 27.789 11.791 1.00 61.45 C
ATOM 14 N1 C A1370 100.789 26.864 10.860 1.00 67.66 N
ATOM 15 C2 C A1370 100.328 26.824 9.553 1.00 74.45 C
ATOM 16 O2 C A1370 99.386 27.564 9.231 1.00 71.07 O
ATOM 17 N3 C A1370 100.907 25.974 8.670 1.00 71.77 N
ATOM 18 C4 C A1370 101.899 25.174 9.066 1.00 64.39 C
ATOM 19 N4 C A1370 102.435 24.346 8.157 1.00 61.30 N
ATOM 20 C5 C A1370 102.385 25.187 10.406 1.00 66.12 C
ATOM 21 C6 C A1370 101.811 26.048 11.259 1.00 65.61 C
ATOM 22 P C A1371 98.599 25.370 15.760 1.00 69.78 P
ATOM 23 OP1 C A1371 97.859 25.667 17.018 1.00 65.52 O
ATOM 24 OP2 C A1371 99.845 24.571 15.810 1.00 63.29 O
ATOM 25 O5' C A1371 97.639 24.602 14.754 1.00 66.79 O
TER
ATOM 1 O3' U B 4 105.838 20.470 7.360 1.00 66.37 O
ATOM 2 P G B 5 105.627 21.658 8.449 1.00 67.82 P
ATOM 3 OP1 G B 5 104.682 21.151 9.489 1.00 67.53 O
ATOM 4 OP2 G B 5 105.316 22.940 7.739 1.00 66.65 O
ATOM 5 O5' G B 5 107.066 21.851 9.111 1.00 65.51 O
ATOM 6 C5' G B 5 107.781 20.752 9.665 1.00 62.25 C
ATOM 7 C4' G B 5 109.136 21.204 10.165 1.00 60.12 C
ATOM 8 O4' G B 5 109.935 21.675 9.045 1.00 60.26 O
ATOM 9 C3' G B 5 109.132 22.326 11.193 1.00 58.80 C
ATOM 10 O3' G B 5 110.193 22.100 12.100 1.00 60.07 O
ATOM 11 C2' G B 5 109.478 23.558 10.372 1.00 58.82 C
ATOM 12 O2' G B 5 110.176 24.529 11.113 1.00 60.00 O
ATOM 13 C1' G B 5 110.403 22.980 9.308 1.00 59.85 C
ATOM 14 N9 G B 5 110.350 23.764 8.079 1.00 61.70 N
ATOM 15 C8 G B 5 109.316 23.831 7.170 1.00 62.53 C
ATOM 16 N7 G B 5 109.536 24.678 6.202 1.00 63.00 N
ATOM 17 C5 G B 5 110.794 25.194 6.482 1.00 63.66 C
ATOM 18 C6 G B 5 111.550 26.176 5.803 1.00 64.48 C
ATOM 19 O6 G B 5 111.239 26.832 4.809 1.00 65.96 O
ATOM 20 N1 G B 5 112.780 26.385 6.409 1.00 64.31 N
ATOM 21 C2 G B 5 113.221 25.747 7.537 1.00 64.65 C
ATOM 22 N2 G B 5 114.452 26.078 7.952 1.00 65.80 N
ATOM 23 N3 G B 5 112.514 24.848 8.203 1.00 63.82 N
ATOM 24 C4 G B 5 111.320 24.621 7.622 1.00 62.80 C
ATOM 25 P C B 6 109.998 22.418 13.661 1.00 61.36 P
ATOM 26 OP1 C B 6 108.585 22.868 13.869 1.00 62.33 O
ATOM 27 OP2 C B 6 111.122 23.299 14.103 1.00 60.21 O
ATOM 28 O5' C B 6 110.183 20.982 14.335 1.00 62.47 O
TER
ATOM 2 P C A1370 104.413 26.881 14.835 1.00 68.37 P
ATOM 3 OP1 C A1370 104.225 26.861 16.313 1.00 59.93 O
ATOM 4 OP2 C A1370 105.160 25.766 14.163 1.00 63.48 O
ATOM 5 O5' C A1370 102.969 27.095 14.202 1.00 64.86 O
ATOM 6 C5' C A1370 101.993 27.887 14.873 1.00 58.71 C
ATOM 7 C4' C A1370 100.738 28.031 14.038 1.00 62.14 C
ATOM 8 O4' C A1370 101.106 28.330 12.666 1.00 60.44 O
ATOM 9 C3' C A1370 99.815 26.822 13.933 1.00 63.70 C
ATOM 10 O3' C A1370 98.919 26.772 15.040 1.00 60.21 O
ATOM 11 C2' C A1370 99.073 27.076 12.622 1.00 63.47 C
ATOM 12 O2' C A1370 97.945 27.913 12.741 1.00 62.21 O
ATOM 13 C1' C A1370 100.137 27.789 11.791 1.00 61.45 C
ATOM 14 N1 C A1370 100.789 26.864 10.860 1.00 67.66 N
ATOM 15 C2 C A1370 100.328 26.824 9.553 1.00 74.45 C
ATOM 16 O2 C A1370 99.386 27.564 9.231 1.00 71.07 O
ATOM 17 N3 C A1370 100.907 25.974 8.670 1.00 71.77 N
ATOM 18 C4 C A1370 101.899 25.174 9.066 1.00 64.39 C
ATOM 19 N4 C A1370 102.435 24.346 8.157 1.00 61.30 N
ATOM 20 C5 C A1370 102.385 25.187 10.406 1.00 66.12 C
ATOM 21 C6 C A1370 101.811 26.048 11.259 1.00 65.61 C
ATOM 22 P C A1371 98.599 25.370 15.760 1.00 69.78 P
ATOM 23 OP1 C A1371 97.859 25.667 17.018 1.00 65.52 O
ATOM 24 OP2 C A1371 99.845 24.571 15.810 1.00 63.29 O
ATOM 25 O5' C A1371 97.639 24.602 14.754 1.00 66.79 O
TER
ATOM 1 O3' U B 4 105.838 20.470 7.360 1.00 66.37 O
ATOM 2 P G B 5 105.627 21.658 8.449 1.00 67.82 P
ATOM 3 OP1 G B 5 104.682 21.151 9.489 1.00 67.53 O
ATOM 4 OP2 G B 5 105.316 22.940 7.739 1.00 66.65 O
ATOM 5 O5' G B 5 107.066 21.851 9.111 1.00 65.51 O
ATOM 6 C5' G B 5 107.781 20.752 9.665 1.00 62.25 C
ATOM 7 C4' G B 5 109.136 21.204 10.165 1.00 60.12 C
ATOM 8 O4' G B 5 109.935 21.675 9.045 1.00 60.26 O
ATOM 9 C3' G B 5 109.132 22.326 11.193 1.00 58.80 C
ATOM 10 O3' G B 5 110.193 22.100 12.100 1.00 60.07 O
ATOM 11 C2' G B 5 109.478 23.558 10.372 1.00 58.82 C
ATOM 12 O2' G B 5 110.176 24.529 11.113 1.00 60.00 O
ATOM 13 C1' G B 5 110.403 22.980 9.308 1.00 59.85 C
ATOM 14 N9 G B 5 110.350 23.764 8.079 1.00 61.70 N
ATOM 15 C8 G B 5 109.316 23.831 7.170 1.00 62.53 C
ATOM 16 N7 G B 5 109.536 24.678 6.202 1.00 63.00 N
ATOM 17 C5 G B 5 110.794 25.194 6.482 1.00 63.66 C
ATOM 18 C6 G B 5 111.550 26.176 5.803 1.00 64.48 C
ATOM 19 O6 G B 5 111.239 26.832 4.809 1.00 65.96 O
ATOM 20 N1 G B 5 112.780 26.385 6.409 1.00 64.31 N
ATOM 21 C2 G B 5 113.221 25.747 7.537 1.00 64.65 C
ATOM 22 N2 G B 5 114.452 26.078 7.952 1.00 65.80 N
ATOM 23 N3 G B 5 112.514 24.848 8.203 1.00 63.82 N
ATOM 24 C4 G B 5 111.320 24.621 7.622 1.00 62.80 C
ATOM 25 P C B 6 109.998 22.418 13.661 1.00 61.36 P
ATOM 26 OP1 C B 6 108.585 22.868 13.869 1.00 62.33 O
ATOM 27 OP2 C B 6 111.122 23.299 14.103 1.00 60.21 O
ATOM 28 O5' C B 6 110.183 20.982 14.335 1.00 62.47 O
TER
Atoms:
C2: (100.328,26.824,9.553)
OP1: (104.225,26.861,16.313)
OP2: (105.160,25.766,14.163)
C4: (101.899,25.174,9.066)
O5': (102.969,27.095,14.202)
C3': (99.815,26.822,13.933)
C1': (100.137,27.789,11.791)
O4': (101.106,28.330,12.666)
C5': (101.993,27.887,14.873)
P: (104.413,26.881,14.835)
O2: (99.386,27.564,9.231)
C4': (100.738,28.031,14.038)
C2': (99.073,27.076,12.622)
O2': (97.945,27.913,12.741)
N1: (100.789,26.864,10.860)
N3: (100.907,25.974,8.670)
N4: (102.435,24.346,8.157)
C6: (101.811,26.048,11.259)
C5: (102.385,25.187,10.406)
O3': (98.919,26.772,15.040)
OP1: (104.225,26.861,16.313)
OP2: (105.160,25.766,14.163)
C4: (101.899,25.174,9.066)
O5': (102.969,27.095,14.202)
C3': (99.815,26.822,13.933)
C1': (100.137,27.789,11.791)
O4': (101.106,28.330,12.666)
C5': (101.993,27.887,14.873)
P: (104.413,26.881,14.835)
O2: (99.386,27.564,9.231)
C4': (100.738,28.031,14.038)
C2': (99.073,27.076,12.622)
O2': (97.945,27.913,12.741)
N1: (100.789,26.864,10.860)
N3: (100.907,25.974,8.670)
N4: (102.435,24.346,8.157)
C6: (101.811,26.048,11.259)
C5: (102.385,25.187,10.406)
O3': (98.919,26.772,15.040)
OP1: (104.682,21.151,9.489)
OP2: (105.316,22.940,7.739)
C3': (109.132,22.326,11.193)
C1': (110.403,22.980,9.308)
C5': (107.781,20.752,9.665)
O6: (111.239,26.832,4.809)
O4': (109.935,21.675,9.045)
C8: (109.316,23.831,7.170)
C2: (113.221,25.747,7.537)
C6: (111.550,26.176,5.803)
C5: (110.794,25.194,6.482)
C4: (111.320,24.621,7.622)
P: (105.627,21.658,8.449)
C4': (109.136,21.204,10.165)
C2': (109.478,23.558,10.372)
O2': (110.176,24.529,11.113)
N1: (112.780,26.385,6.409)
N2: (114.452,26.078,7.952)
N3: (112.514,24.848,8.203)
N7: (109.536,24.678,6.202)
N9: (110.350,23.764,8.079)
O5': (107.066,21.851,9.111)
O3': (110.193,22.100,12.100)
OP2: (105.316,22.940,7.739)
C3': (109.132,22.326,11.193)
C1': (110.403,22.980,9.308)
C5': (107.781,20.752,9.665)
O6: (111.239,26.832,4.809)
O4': (109.935,21.675,9.045)
C8: (109.316,23.831,7.170)
C2: (113.221,25.747,7.537)
C6: (111.550,26.176,5.803)
C5: (110.794,25.194,6.482)
C4: (111.320,24.621,7.622)
P: (105.627,21.658,8.449)
C4': (109.136,21.204,10.165)
C2': (109.478,23.558,10.372)
O2': (110.176,24.529,11.113)
N1: (112.780,26.385,6.409)
N2: (114.452,26.078,7.952)
N3: (112.514,24.848,8.203)
N7: (109.536,24.678,6.202)
N9: (110.350,23.764,8.079)
O5': (107.066,21.851,9.111)
O3': (110.193,22.100,12.100)
Image (generated by PyMOL):