Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2517:A756
Extra
PDB:
ATOM 1 O3' U A2516 63.406 -60.522 -1.271 1.00 53.82 O
ATOM 2 P C A2517 63.128 -61.114 0.205 1.00 51.86 P
ATOM 3 OP1 C A2517 61.665 -61.085 0.475 1.00 54.86 O
ATOM 4 OP2 C A2517 64.049 -60.461 1.169 1.00 50.46 O
ATOM 5 O5' C A2517 63.531 -62.645 0.076 1.00 49.99 O
ATOM 6 C5' C A2517 62.649 -63.554 -0.576 1.00 57.39 C
ATOM 7 C4' C A2517 61.640 -64.061 0.410 1.00 55.32 C
ATOM 8 O4' C A2517 60.304 -63.727 -0.012 1.00 50.12 O
ATOM 9 C3' C A2517 61.610 -65.555 0.657 1.00 51.08 C
ATOM 10 O3' C A2517 62.642 -65.843 1.588 1.00 48.14 O
ATOM 11 C2' C A2517 60.213 -65.766 1.242 1.00 45.23 C
ATOM 12 O2' C A2517 60.158 -65.538 2.628 1.00 40.63 O
ATOM 13 C1' C A2517 59.410 -64.643 0.578 1.00 49.80 C
ATOM 14 N1 C A2517 58.452 -65.083 -0.431 1.00 51.30 N
ATOM 15 C2 C A2517 57.275 -65.711 -0.009 1.00 45.68 C
ATOM 16 O2 C A2517 57.039 -65.818 1.217 1.00 38.78 O
ATOM 17 N3 C A2517 56.425 -66.181 -0.941 1.00 54.41 N
ATOM 18 C4 C A2517 56.712 -66.037 -2.242 1.00 54.21 C
ATOM 19 N4 C A2517 55.869 -66.562 -3.128 1.00 59.17 N
ATOM 20 C5 C A2517 57.881 -65.360 -2.689 1.00 53.08 C
ATOM 21 C6 C A2517 58.714 -64.904 -1.761 1.00 52.58 C
ATOM 22 P U A2518 63.474 -67.191 1.424 1.00 42.12 P
ATOM 23 OP1 U A2518 64.118 -67.471 2.742 1.00 37.52 O
ATOM 24 OP2 U A2518 64.315 -67.026 0.200 1.00 39.60 O
ATOM 25 O5' U A2518 62.352 -68.287 1.151 1.00 44.29 O
TER
ATOM 1 O3' U B 755 56.206 -65.479 -7.634 1.00 51.02 O
ATOM 2 P G B 756 54.974 -65.914 -6.704 1.00 53.31 P
ATOM 3 OP1 G B 756 55.500 -66.667 -5.546 1.00 46.38 O
ATOM 4 OP2 G B 756 53.929 -66.531 -7.542 1.00 53.70 O
ATOM 5 O5' G B 756 54.386 -64.524 -6.206 1.00 45.92 O
ATOM 6 C5' G B 756 54.274 -64.268 -4.825 1.00 46.36 C
ATOM 7 C4' G B 756 53.874 -62.847 -4.585 1.00 42.67 C
ATOM 8 O4' G B 756 54.571 -61.998 -5.516 1.00 38.56 O
ATOM 9 C3' G B 756 52.412 -62.493 -4.797 1.00 41.58 C
ATOM 10 O3' G B 756 51.712 -62.777 -3.578 1.00 38.04 O
ATOM 11 C2' G B 756 52.461 -60.979 -5.067 1.00 47.46 C
ATOM 12 O2' G B 756 52.152 -60.194 -3.920 1.00 45.62 O
ATOM 13 C1' G B 756 53.921 -60.752 -5.513 1.00 44.74 C
ATOM 14 N9 G B 756 54.219 -60.049 -6.763 1.00 45.67 N
ATOM 15 C8 G B 756 53.624 -60.208 -7.991 1.00 43.80 C
ATOM 16 N7 G B 756 54.164 -59.464 -8.921 1.00 45.06 N
ATOM 17 C5 G B 756 55.172 -58.762 -8.264 1.00 45.72 C
ATOM 18 C6 G B 756 56.125 -57.816 -8.756 1.00 45.32 C
ATOM 19 O6 G B 756 56.288 -57.401 -9.914 1.00 44.34 O
ATOM 20 N1 G B 756 56.960 -57.363 -7.741 1.00 41.76 N
ATOM 21 C2 G B 756 56.904 -57.771 -6.433 1.00 41.50 C
ATOM 22 N2 G B 756 57.806 -57.248 -5.604 1.00 38.41 N
ATOM 23 N3 G B 756 56.034 -58.638 -5.969 1.00 44.19 N
ATOM 24 C4 G B 756 55.206 -59.097 -6.931 1.00 44.61 C
ATOM 25 P C B 757 50.486 -63.816 -3.581 1.00 47.39 P
ATOM 26 OP1 C B 757 50.066 -64.117 -2.168 1.00 35.68 O
ATOM 27 OP2 C B 757 50.850 -64.925 -4.499 1.00 42.39 O
ATOM 28 O5' C B 757 49.345 -62.973 -4.311 1.00 41.74 O
TER
ATOM 2 P C A2517 63.128 -61.114 0.205 1.00 51.86 P
ATOM 3 OP1 C A2517 61.665 -61.085 0.475 1.00 54.86 O
ATOM 4 OP2 C A2517 64.049 -60.461 1.169 1.00 50.46 O
ATOM 5 O5' C A2517 63.531 -62.645 0.076 1.00 49.99 O
ATOM 6 C5' C A2517 62.649 -63.554 -0.576 1.00 57.39 C
ATOM 7 C4' C A2517 61.640 -64.061 0.410 1.00 55.32 C
ATOM 8 O4' C A2517 60.304 -63.727 -0.012 1.00 50.12 O
ATOM 9 C3' C A2517 61.610 -65.555 0.657 1.00 51.08 C
ATOM 10 O3' C A2517 62.642 -65.843 1.588 1.00 48.14 O
ATOM 11 C2' C A2517 60.213 -65.766 1.242 1.00 45.23 C
ATOM 12 O2' C A2517 60.158 -65.538 2.628 1.00 40.63 O
ATOM 13 C1' C A2517 59.410 -64.643 0.578 1.00 49.80 C
ATOM 14 N1 C A2517 58.452 -65.083 -0.431 1.00 51.30 N
ATOM 15 C2 C A2517 57.275 -65.711 -0.009 1.00 45.68 C
ATOM 16 O2 C A2517 57.039 -65.818 1.217 1.00 38.78 O
ATOM 17 N3 C A2517 56.425 -66.181 -0.941 1.00 54.41 N
ATOM 18 C4 C A2517 56.712 -66.037 -2.242 1.00 54.21 C
ATOM 19 N4 C A2517 55.869 -66.562 -3.128 1.00 59.17 N
ATOM 20 C5 C A2517 57.881 -65.360 -2.689 1.00 53.08 C
ATOM 21 C6 C A2517 58.714 -64.904 -1.761 1.00 52.58 C
ATOM 22 P U A2518 63.474 -67.191 1.424 1.00 42.12 P
ATOM 23 OP1 U A2518 64.118 -67.471 2.742 1.00 37.52 O
ATOM 24 OP2 U A2518 64.315 -67.026 0.200 1.00 39.60 O
ATOM 25 O5' U A2518 62.352 -68.287 1.151 1.00 44.29 O
TER
ATOM 1 O3' U B 755 56.206 -65.479 -7.634 1.00 51.02 O
ATOM 2 P G B 756 54.974 -65.914 -6.704 1.00 53.31 P
ATOM 3 OP1 G B 756 55.500 -66.667 -5.546 1.00 46.38 O
ATOM 4 OP2 G B 756 53.929 -66.531 -7.542 1.00 53.70 O
ATOM 5 O5' G B 756 54.386 -64.524 -6.206 1.00 45.92 O
ATOM 6 C5' G B 756 54.274 -64.268 -4.825 1.00 46.36 C
ATOM 7 C4' G B 756 53.874 -62.847 -4.585 1.00 42.67 C
ATOM 8 O4' G B 756 54.571 -61.998 -5.516 1.00 38.56 O
ATOM 9 C3' G B 756 52.412 -62.493 -4.797 1.00 41.58 C
ATOM 10 O3' G B 756 51.712 -62.777 -3.578 1.00 38.04 O
ATOM 11 C2' G B 756 52.461 -60.979 -5.067 1.00 47.46 C
ATOM 12 O2' G B 756 52.152 -60.194 -3.920 1.00 45.62 O
ATOM 13 C1' G B 756 53.921 -60.752 -5.513 1.00 44.74 C
ATOM 14 N9 G B 756 54.219 -60.049 -6.763 1.00 45.67 N
ATOM 15 C8 G B 756 53.624 -60.208 -7.991 1.00 43.80 C
ATOM 16 N7 G B 756 54.164 -59.464 -8.921 1.00 45.06 N
ATOM 17 C5 G B 756 55.172 -58.762 -8.264 1.00 45.72 C
ATOM 18 C6 G B 756 56.125 -57.816 -8.756 1.00 45.32 C
ATOM 19 O6 G B 756 56.288 -57.401 -9.914 1.00 44.34 O
ATOM 20 N1 G B 756 56.960 -57.363 -7.741 1.00 41.76 N
ATOM 21 C2 G B 756 56.904 -57.771 -6.433 1.00 41.50 C
ATOM 22 N2 G B 756 57.806 -57.248 -5.604 1.00 38.41 N
ATOM 23 N3 G B 756 56.034 -58.638 -5.969 1.00 44.19 N
ATOM 24 C4 G B 756 55.206 -59.097 -6.931 1.00 44.61 C
ATOM 25 P C B 757 50.486 -63.816 -3.581 1.00 47.39 P
ATOM 26 OP1 C B 757 50.066 -64.117 -2.168 1.00 35.68 O
ATOM 27 OP2 C B 757 50.850 -64.925 -4.499 1.00 42.39 O
ATOM 28 O5' C B 757 49.345 -62.973 -4.311 1.00 41.74 O
TER
Atoms:
C2: (57.275,-65.711,-0.009)
OP1: (61.665,-61.085,0.475)
OP2: (64.049,-60.461,1.169)
C4: (56.712,-66.037,-2.242)
O5': (63.531,-62.645,0.076)
C3': (61.610,-65.555,0.657)
C1': (59.410,-64.643,0.578)
O4': (60.304,-63.727,-0.012)
C5': (62.649,-63.554,-0.576)
P: (63.128,-61.114,0.205)
O2: (57.039,-65.818,1.217)
C4': (61.640,-64.061,0.410)
C2': (60.213,-65.766,1.242)
O2': (60.158,-65.538,2.628)
N1: (58.452,-65.083,-0.431)
N3: (56.425,-66.181,-0.941)
N4: (55.869,-66.562,-3.128)
C6: (58.714,-64.904,-1.761)
C5: (57.881,-65.360,-2.689)
O3': (62.642,-65.843,1.588)
OP1: (61.665,-61.085,0.475)
OP2: (64.049,-60.461,1.169)
C4: (56.712,-66.037,-2.242)
O5': (63.531,-62.645,0.076)
C3': (61.610,-65.555,0.657)
C1': (59.410,-64.643,0.578)
O4': (60.304,-63.727,-0.012)
C5': (62.649,-63.554,-0.576)
P: (63.128,-61.114,0.205)
O2: (57.039,-65.818,1.217)
C4': (61.640,-64.061,0.410)
C2': (60.213,-65.766,1.242)
O2': (60.158,-65.538,2.628)
N1: (58.452,-65.083,-0.431)
N3: (56.425,-66.181,-0.941)
N4: (55.869,-66.562,-3.128)
C6: (58.714,-64.904,-1.761)
C5: (57.881,-65.360,-2.689)
O3': (62.642,-65.843,1.588)
OP1: (55.500,-66.667,-5.546)
OP2: (53.929,-66.531,-7.542)
C3': (52.412,-62.493,-4.797)
C1': (53.921,-60.752,-5.513)
C5': (54.274,-64.268,-4.825)
O6: (56.288,-57.401,-9.914)
O4': (54.571,-61.998,-5.516)
C8: (53.624,-60.208,-7.991)
C2: (56.904,-57.771,-6.433)
C6: (56.125,-57.816,-8.756)
C5: (55.172,-58.762,-8.264)
C4: (55.206,-59.097,-6.931)
P: (54.974,-65.914,-6.704)
C4': (53.874,-62.847,-4.585)
C2': (52.461,-60.979,-5.067)
O2': (52.152,-60.194,-3.920)
N1: (56.960,-57.363,-7.741)
N2: (57.806,-57.248,-5.604)
N3: (56.034,-58.638,-5.969)
N7: (54.164,-59.464,-8.921)
N9: (54.219,-60.049,-6.763)
O5': (54.386,-64.524,-6.206)
O3': (51.712,-62.777,-3.578)
OP2: (53.929,-66.531,-7.542)
C3': (52.412,-62.493,-4.797)
C1': (53.921,-60.752,-5.513)
C5': (54.274,-64.268,-4.825)
O6: (56.288,-57.401,-9.914)
O4': (54.571,-61.998,-5.516)
C8: (53.624,-60.208,-7.991)
C2: (56.904,-57.771,-6.433)
C6: (56.125,-57.816,-8.756)
C5: (55.172,-58.762,-8.264)
C4: (55.206,-59.097,-6.931)
P: (54.974,-65.914,-6.704)
C4': (53.874,-62.847,-4.585)
C2': (52.461,-60.979,-5.067)
O2': (52.152,-60.194,-3.920)
N1: (56.960,-57.363,-7.741)
N2: (57.806,-57.248,-5.604)
N3: (56.034,-58.638,-5.969)
N7: (54.164,-59.464,-8.921)
N9: (54.219,-60.049,-6.763)
O5': (54.386,-64.524,-6.206)
O3': (51.712,-62.777,-3.578)
Image (generated by PyMOL):