ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1083:A1086

Extra

PDB:
ATOM 1 O3' U A1082 105.636 -82.935 15.969 1.00 53.69 O
ATOM 2 P C A1083 106.500 -81.655 15.475 1.00 47.13 P
ATOM 3 OP1 C A1083 107.054 -81.005 16.688 1.00142.82 O
ATOM 4 OP2 C A1083 105.631 -80.861 14.573 1.00141.28 O
ATOM 5 O5' C A1083 107.670 -82.328 14.641 1.00 54.27 O
ATOM 6 C5' C A1083 107.396 -83.038 13.439 1.00 53.15 C
ATOM 7 C4' C A1083 108.557 -83.908 13.035 1.00 43.73 C
ATOM 8 O4' C A1083 108.865 -84.818 14.105 1.00 46.04 O
ATOM 9 C3' C A1083 108.342 -84.796 11.815 1.00 44.79 C
ATOM 10 O3' C A1083 108.643 -84.127 10.599 1.00 60.02 O
ATOM 11 C2' C A1083 109.270 -85.979 12.071 1.00 41.44 C
ATOM 12 O2' C A1083 110.561 -85.715 11.565 1.00 54.17 O
ATOM 13 C1' C A1083 109.354 -86.028 13.592 1.00 43.19 C
ATOM 14 N1 C A1083 108.574 -87.130 14.163 1.00 39.41 N
ATOM 15 C2 C A1083 108.992 -88.436 13.955 1.00 47.59 C
ATOM 16 O2 C A1083 110.019 -88.623 13.278 1.00 51.17 O
ATOM 17 N3 C A1083 108.259 -89.446 14.487 1.00 46.07 N
ATOM 18 C4 C A1083 107.170 -89.170 15.199 1.00 37.61 C
ATOM 19 N4 C A1083 106.453 -90.169 15.715 1.00 38.63 N
ATOM 20 C5 C A1083 106.746 -87.844 15.414 1.00 37.91 C
ATOM 21 C6 C A1083 107.472 -86.867 14.891 1.00 39.13 C
ATOM 22 P G A1084 107.526 -83.899 9.456 1.00 64.02 P
ATOM 23 OP1 G A1084 108.227 -83.981 8.145 1.00 62.36 O
ATOM 24 OP2 G A1084 106.790 -82.650 9.797 1.00 60.72 O
ATOM 25 O5' G A1084 106.568 -85.148 9.624 1.00 51.87 O
TER

ATOM 1 O3' G B1085 101.857 -89.711 15.918 1.00 32.99 O
ATOM 2 P G B1086 102.716 -89.865 17.249 1.00 35.07 P
ATOM 3 OP1 G B1086 101.910 -89.312 18.368 1.00 36.24 O
ATOM 4 OP2 G B1086 104.055 -89.286 16.975 1.00 38.23 O
ATOM 5 O5' G B1086 102.834 -91.440 17.395 1.00 32.17 O
ATOM 6 C5' G B1086 101.796 -92.173 17.992 1.00 38.93 C
ATOM 7 C4' G B1086 101.940 -93.637 17.733 1.00 34.31 C
ATOM 8 O4' G B1086 102.477 -93.850 16.421 1.00 35.94 O
ATOM 9 C3' G B1086 102.894 -94.362 18.627 1.00 36.38 C
ATOM 10 O3' G B1086 102.335 -94.656 19.873 1.00 40.16 O
ATOM 11 C2' G B1086 103.236 -95.586 17.814 1.00 36.04 C
ATOM 12 O2' G B1086 102.169 -96.514 17.861 1.00 37.48 O
ATOM 13 C1' G B1086 103.283 -94.995 16.421 1.00 35.75 C
ATOM 14 N9 G B1086 104.634 -94.592 16.012 1.00 41.43 N
ATOM 15 C8 G B1086 104.997 -93.290 15.755 1.00 38.36 C
ATOM 16 N7 G B1086 106.218 -93.180 15.347 1.00 34.83 N
ATOM 17 C5 G B1086 106.679 -94.483 15.309 1.00 38.33 C
ATOM 18 C6 G B1086 107.940 -94.985 14.936 1.00 37.99 C
ATOM 19 O6 G B1086 108.920 -94.357 14.553 1.00 35.96 O
ATOM 20 N1 G B1086 107.999 -96.367 15.063 1.00 40.63 N
ATOM 21 C2 G B1086 106.972 -97.169 15.488 1.00 34.62 C
ATOM 22 N2 G B1086 107.233 -98.466 15.526 1.00 33.51 N
ATOM 23 N3 G B1086 105.784 -96.728 15.834 1.00 34.08 N
ATOM 24 C4 G B1086 105.713 -95.381 15.714 1.00 40.43 C
ATOM 25 P G B1087 102.915 -93.952 21.162 1.00 44.12 P
ATOM 26 OP1 G B1087 102.377 -94.694 22.335 1.00 59.77 O
ATOM 27 OP2 G B1087 102.622 -92.510 21.027 1.00 51.77 O
ATOM 28 O5' G B1087 104.493 -94.192 21.021 1.00 47.77 O
TER

Atoms:
C2: (108.992,-88.436,13.955)
OP1: (107.054,-81.005,16.688)
OP2: (105.631,-80.861,14.573)
C4: (107.170,-89.170,15.199)
O5': (107.670,-82.328,14.641)
C3': (108.342,-84.796,11.815)
C1': (109.354,-86.028,13.592)
O4': (108.865,-84.818,14.105)
C5': (107.396,-83.038,13.439)
P: (106.500,-81.655,15.475)
O2: (110.019,-88.623,13.278)
C4': (108.557,-83.908,13.035)
C2': (109.270,-85.979,12.071)
O2': (110.561,-85.715,11.565)
N1: (108.574,-87.130,14.163)
N3: (108.259,-89.446,14.487)
N4: (106.453,-90.169,15.715)
C6: (107.472,-86.867,14.891)
C5: (106.746,-87.844,15.414)
O3': (108.643,-84.127,10.599)
OP1: (101.910,-89.312,18.368)
OP2: (104.055,-89.286,16.975)
C3': (102.894,-94.362,18.627)
C1': (103.283,-94.995,16.421)
C5': (101.796,-92.173,17.992)
O6: (108.920,-94.357,14.553)
O4': (102.477,-93.850,16.421)
C8: (104.997,-93.290,15.755)
C2: (106.972,-97.169,15.488)
C6: (107.940,-94.985,14.936)
C5: (106.679,-94.483,15.309)
C4: (105.713,-95.381,15.714)
P: (102.716,-89.865,17.249)
C4': (101.940,-93.637,17.733)
C2': (103.236,-95.586,17.814)
O2': (102.169,-96.514,17.861)
N1: (107.999,-96.367,15.063)
N2: (107.233,-98.466,15.526)
N3: (105.784,-96.728,15.834)
N7: (106.218,-93.180,15.347)
N9: (104.634,-94.592,16.012)
O5': (102.834,-91.440,17.395)
O3': (102.335,-94.656,19.873)
Image (generated by PyMOL):
PyMOL image
show in jmol