Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3P59:F8:F6
Extra
PDB:
ATOM 1 O3' C A 7 39.342 -29.362 2.790 1.00 46.32 O
ATOM 2 P C A 8 40.720 -30.146 3.052 1.00 45.07 P
ATOM 3 OP1 C A 8 41.536 -29.281 3.919 1.00 39.79 O
ATOM 4 OP2 C A 8 41.271 -30.536 1.722 1.00 52.08 O
ATOM 5 O5' C A 8 40.247 -31.462 3.840 1.00 50.43 O
ATOM 6 C5' C A 8 40.254 -31.533 5.263 1.00 48.17 C
ATOM 7 C4' C A 8 41.119 -32.672 5.769 1.00 47.05 C
ATOM 8 O4' C A 8 41.640 -32.340 7.079 1.00 48.62 O
ATOM 9 C3' C A 8 40.438 -34.025 5.956 1.00 57.68 C
ATOM 10 O3' C A 8 40.376 -34.781 4.737 1.00 63.96 O
ATOM 11 C2' C A 8 41.297 -34.678 7.043 1.00 57.12 C
ATOM 12 O2' C A 8 42.485 -35.216 6.486 1.00 71.05 O
ATOM 13 C1' C A 8 41.688 -33.483 7.896 1.00 45.02 C
ATOM 14 N1 C A 8 40.773 -33.269 9.047 1.00 41.16 N
ATOM 15 C2 C A 8 40.846 -34.090 10.166 1.00 38.80 C
ATOM 16 O2 C A 8 41.659 -35.011 10.137 1.00 34.74 O
ATOM 17 N3 C A 8 40.017 -33.872 11.218 1.00 40.10 N
ATOM 18 C4 C A 8 39.148 -32.854 11.192 1.00 35.95 C
ATOM 19 N4 C A 8 38.339 -32.650 12.239 1.00 33.63 N
ATOM 20 C5 C A 8 39.069 -31.995 10.073 1.00 33.81 C
ATOM 21 C6 C A 8 39.888 -32.232 9.047 1.00 37.41 C
ATOM 22 P U A 9 39.348 -36.024 4.551 1.00 56.94 P
ATOM 23 OP1 U A 9 39.603 -36.601 3.208 1.00 53.75 O
ATOM 24 OP2 U A 9 37.974 -35.524 4.865 1.00 47.50 O
ATOM 25 O5' U A 9 39.829 -37.054 5.669 1.00 44.61 O
TER
ATOM 1 O3' A B 5 34.695 -28.686 13.252 1.00 36.39 O
ATOM 2 P G B 6 35.945 -29.234 12.444 1.00 30.67 P
ATOM 3 OP1 G B 6 35.963 -30.707 12.593 1.00 28.61 O
ATOM 4 OP2 G B 6 37.123 -28.449 12.885 1.00 28.59 O
ATOM 5 O5' G B 6 35.588 -28.846 10.965 1.00 35.22 O
ATOM 6 C5' G B 6 34.329 -29.136 10.424 1.00 38.46 C
ATOM 7 C4' G B 6 34.172 -28.475 9.092 1.00 34.98 C
ATOM 8 O4' G B 6 34.007 -27.046 9.288 1.00 31.86 O
ATOM 9 C3' G B 6 35.377 -28.566 8.169 1.00 41.52 C
ATOM 10 O3' G B 6 35.510 -29.827 7.515 1.00 39.57 O
ATOM 11 C2' G B 6 35.130 -27.401 7.228 1.00 41.01 C
ATOM 12 O2' G B 6 34.104 -27.728 6.307 1.00 45.66 O
ATOM 13 C1' G B 6 34.587 -26.357 8.199 1.00 33.98 C
ATOM 14 N9 G B 6 35.643 -25.455 8.708 1.00 26.74 N
ATOM 15 C8 G B 6 36.314 -25.394 9.908 1.00 27.42 C
ATOM 16 N7 G B 6 37.177 -24.391 9.970 1.00 25.32 N
ATOM 17 C5 G B 6 37.050 -23.744 8.748 1.00 13.44 C
ATOM 18 C6 G B 6 37.715 -22.612 8.198 1.00 16.49 C
ATOM 19 O6 G B 6 38.585 -21.823 8.631 1.00 13.96 O
ATOM 20 N1 G B 6 37.239 -22.397 6.929 1.00 19.57 N
ATOM 21 C2 G B 6 36.285 -23.118 6.272 1.00 22.18 C
ATOM 22 N2 G B 6 35.984 -22.715 5.036 1.00 23.57 N
ATOM 23 N3 G B 6 35.668 -24.162 6.760 1.00 22.63 N
ATOM 24 C4 G B 6 36.116 -24.408 7.987 1.00 18.35 C
ATOM 25 P C B 7 36.972 -30.400 7.117 1.00 33.99 P
ATOM 26 OP1 C B 7 36.770 -31.722 6.515 1.00 29.50 O
ATOM 27 OP2 C B 7 37.831 -30.295 8.312 1.00 37.05 O
ATOM 28 O5' C B 7 37.478 -29.374 6.005 1.00 55.14 O
TER
ATOM 2 P C A 8 40.720 -30.146 3.052 1.00 45.07 P
ATOM 3 OP1 C A 8 41.536 -29.281 3.919 1.00 39.79 O
ATOM 4 OP2 C A 8 41.271 -30.536 1.722 1.00 52.08 O
ATOM 5 O5' C A 8 40.247 -31.462 3.840 1.00 50.43 O
ATOM 6 C5' C A 8 40.254 -31.533 5.263 1.00 48.17 C
ATOM 7 C4' C A 8 41.119 -32.672 5.769 1.00 47.05 C
ATOM 8 O4' C A 8 41.640 -32.340 7.079 1.00 48.62 O
ATOM 9 C3' C A 8 40.438 -34.025 5.956 1.00 57.68 C
ATOM 10 O3' C A 8 40.376 -34.781 4.737 1.00 63.96 O
ATOM 11 C2' C A 8 41.297 -34.678 7.043 1.00 57.12 C
ATOM 12 O2' C A 8 42.485 -35.216 6.486 1.00 71.05 O
ATOM 13 C1' C A 8 41.688 -33.483 7.896 1.00 45.02 C
ATOM 14 N1 C A 8 40.773 -33.269 9.047 1.00 41.16 N
ATOM 15 C2 C A 8 40.846 -34.090 10.166 1.00 38.80 C
ATOM 16 O2 C A 8 41.659 -35.011 10.137 1.00 34.74 O
ATOM 17 N3 C A 8 40.017 -33.872 11.218 1.00 40.10 N
ATOM 18 C4 C A 8 39.148 -32.854 11.192 1.00 35.95 C
ATOM 19 N4 C A 8 38.339 -32.650 12.239 1.00 33.63 N
ATOM 20 C5 C A 8 39.069 -31.995 10.073 1.00 33.81 C
ATOM 21 C6 C A 8 39.888 -32.232 9.047 1.00 37.41 C
ATOM 22 P U A 9 39.348 -36.024 4.551 1.00 56.94 P
ATOM 23 OP1 U A 9 39.603 -36.601 3.208 1.00 53.75 O
ATOM 24 OP2 U A 9 37.974 -35.524 4.865 1.00 47.50 O
ATOM 25 O5' U A 9 39.829 -37.054 5.669 1.00 44.61 O
TER
ATOM 1 O3' A B 5 34.695 -28.686 13.252 1.00 36.39 O
ATOM 2 P G B 6 35.945 -29.234 12.444 1.00 30.67 P
ATOM 3 OP1 G B 6 35.963 -30.707 12.593 1.00 28.61 O
ATOM 4 OP2 G B 6 37.123 -28.449 12.885 1.00 28.59 O
ATOM 5 O5' G B 6 35.588 -28.846 10.965 1.00 35.22 O
ATOM 6 C5' G B 6 34.329 -29.136 10.424 1.00 38.46 C
ATOM 7 C4' G B 6 34.172 -28.475 9.092 1.00 34.98 C
ATOM 8 O4' G B 6 34.007 -27.046 9.288 1.00 31.86 O
ATOM 9 C3' G B 6 35.377 -28.566 8.169 1.00 41.52 C
ATOM 10 O3' G B 6 35.510 -29.827 7.515 1.00 39.57 O
ATOM 11 C2' G B 6 35.130 -27.401 7.228 1.00 41.01 C
ATOM 12 O2' G B 6 34.104 -27.728 6.307 1.00 45.66 O
ATOM 13 C1' G B 6 34.587 -26.357 8.199 1.00 33.98 C
ATOM 14 N9 G B 6 35.643 -25.455 8.708 1.00 26.74 N
ATOM 15 C8 G B 6 36.314 -25.394 9.908 1.00 27.42 C
ATOM 16 N7 G B 6 37.177 -24.391 9.970 1.00 25.32 N
ATOM 17 C5 G B 6 37.050 -23.744 8.748 1.00 13.44 C
ATOM 18 C6 G B 6 37.715 -22.612 8.198 1.00 16.49 C
ATOM 19 O6 G B 6 38.585 -21.823 8.631 1.00 13.96 O
ATOM 20 N1 G B 6 37.239 -22.397 6.929 1.00 19.57 N
ATOM 21 C2 G B 6 36.285 -23.118 6.272 1.00 22.18 C
ATOM 22 N2 G B 6 35.984 -22.715 5.036 1.00 23.57 N
ATOM 23 N3 G B 6 35.668 -24.162 6.760 1.00 22.63 N
ATOM 24 C4 G B 6 36.116 -24.408 7.987 1.00 18.35 C
ATOM 25 P C B 7 36.972 -30.400 7.117 1.00 33.99 P
ATOM 26 OP1 C B 7 36.770 -31.722 6.515 1.00 29.50 O
ATOM 27 OP2 C B 7 37.831 -30.295 8.312 1.00 37.05 O
ATOM 28 O5' C B 7 37.478 -29.374 6.005 1.00 55.14 O
TER
Atoms:
C2: (40.846,-34.090,10.166)
OP1: (41.536,-29.281,3.919)
OP2: (41.271,-30.536,1.722)
C4: (39.148,-32.854,11.192)
O5': (40.247,-31.462,3.840)
C3': (40.438,-34.025,5.956)
C1': (41.688,-33.483,7.896)
O4': (41.640,-32.340,7.079)
C5': (40.254,-31.533,5.263)
P: (40.720,-30.146,3.052)
O2: (41.659,-35.011,10.137)
C4': (41.119,-32.672,5.769)
C2': (41.297,-34.678,7.043)
O2': (42.485,-35.216,6.486)
N1: (40.773,-33.269,9.047)
N3: (40.017,-33.872,11.218)
N4: (38.339,-32.650,12.239)
C6: (39.888,-32.232,9.047)
C5: (39.069,-31.995,10.073)
O3': (40.376,-34.781,4.737)
OP1: (41.536,-29.281,3.919)
OP2: (41.271,-30.536,1.722)
C4: (39.148,-32.854,11.192)
O5': (40.247,-31.462,3.840)
C3': (40.438,-34.025,5.956)
C1': (41.688,-33.483,7.896)
O4': (41.640,-32.340,7.079)
C5': (40.254,-31.533,5.263)
P: (40.720,-30.146,3.052)
O2: (41.659,-35.011,10.137)
C4': (41.119,-32.672,5.769)
C2': (41.297,-34.678,7.043)
O2': (42.485,-35.216,6.486)
N1: (40.773,-33.269,9.047)
N3: (40.017,-33.872,11.218)
N4: (38.339,-32.650,12.239)
C6: (39.888,-32.232,9.047)
C5: (39.069,-31.995,10.073)
O3': (40.376,-34.781,4.737)
OP1: (35.963,-30.707,12.593)
OP2: (37.123,-28.449,12.885)
C3': (35.377,-28.566,8.169)
C1': (34.587,-26.357,8.199)
C5': (34.329,-29.136,10.424)
O6: (38.585,-21.823,8.631)
O4': (34.007,-27.046,9.288)
C8: (36.314,-25.394,9.908)
C2: (36.285,-23.118,6.272)
C6: (37.715,-22.612,8.198)
C5: (37.050,-23.744,8.748)
C4: (36.116,-24.408,7.987)
P: (35.945,-29.234,12.444)
C4': (34.172,-28.475,9.092)
C2': (35.130,-27.401,7.228)
O2': (34.104,-27.728,6.307)
N1: (37.239,-22.397,6.929)
N2: (35.984,-22.715,5.036)
N3: (35.668,-24.162,6.760)
N7: (37.177,-24.391,9.970)
N9: (35.643,-25.455,8.708)
O5': (35.588,-28.846,10.965)
O3': (35.510,-29.827,7.515)
OP2: (37.123,-28.449,12.885)
C3': (35.377,-28.566,8.169)
C1': (34.587,-26.357,8.199)
C5': (34.329,-29.136,10.424)
O6: (38.585,-21.823,8.631)
O4': (34.007,-27.046,9.288)
C8: (36.314,-25.394,9.908)
C2: (36.285,-23.118,6.272)
C6: (37.715,-22.612,8.198)
C5: (37.050,-23.744,8.748)
C4: (36.116,-24.408,7.987)
P: (35.945,-29.234,12.444)
C4': (34.172,-28.475,9.092)
C2': (35.130,-27.401,7.228)
O2': (34.104,-27.728,6.307)
N1: (37.239,-22.397,6.929)
N2: (35.984,-22.715,5.036)
N3: (35.668,-24.162,6.760)
N7: (37.177,-24.391,9.970)
N9: (35.643,-25.455,8.708)
O5': (35.588,-28.846,10.965)
O3': (35.510,-29.827,7.515)
Image (generated by PyMOL):