Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X71:X35
Extra
PDB:
ATOM 1 O3' U A 70 12.772 -7.555 15.762 1.00 26.98 O
ATOM 2 P C A 71 11.197 -7.310 15.919 1.00 34.01 P
ATOM 3 OP1 C A 71 10.748 -8.052 17.123 1.00 31.52 O
ATOM 4 OP2 C A 71 10.690 -7.659 14.577 1.00 34.79 O
ATOM 5 O5' C A 71 10.968 -5.758 16.209 1.00 32.37 O
ATOM 6 C5' C A 71 11.466 -4.740 15.344 1.00 35.06 C
ATOM 7 C4' C A 71 10.887 -3.382 15.664 1.00 35.43 C
ATOM 8 O4' C A 71 9.460 -3.389 15.381 1.00 37.45 O
ATOM 9 C3' C A 71 11.037 -2.898 17.111 1.00 37.35 C
ATOM 10 O3' C A 71 11.211 -1.482 17.109 1.00 37.46 O
ATOM 11 C2' C A 71 9.661 -3.209 17.701 1.00 37.69 C
ATOM 12 O2' C A 71 9.301 -2.451 18.838 1.00 37.83 O
ATOM 13 C1' C A 71 8.763 -2.887 16.508 1.00 39.35 C
ATOM 14 N1 C A 71 7.394 -3.455 16.606 1.00 45.04 N
ATOM 15 C2 C A 71 6.296 -2.661 16.234 1.00 46.85 C
ATOM 16 O2 C A 71 6.489 -1.506 15.822 1.00 45.80 O
ATOM 17 N3 C A 71 5.044 -3.173 16.333 1.00 47.47 N
ATOM 18 C4 C A 71 4.865 -4.419 16.783 1.00 46.22 C
ATOM 19 N4 C A 71 3.615 -4.883 16.860 1.00 45.44 N
ATOM 20 C5 C A 71 5.960 -5.242 17.177 1.00 44.47 C
ATOM 21 C6 C A 71 7.193 -4.727 17.075 1.00 43.01 C
ATOM 22 P A A 72 12.628 -0.722 17.216 1.00 38.62 P
ATOM 23 OP1 A A 72 12.261 0.497 17.980 1.00 43.72 O
ATOM 24 OP2 A A 72 13.163 -0.595 15.837 1.00 34.56 O
ATOM 25 O5' A A 72 13.598 -1.616 18.094 1.00 31.08 O
TER
ATOM 1 O3' C B 34 1.664 -7.995 17.864 1.00 41.92 O
ATOM 2 P G B 35 3.074 -8.114 18.643 1.00 43.52 P
ATOM 3 OP1 G B 35 3.717 -6.779 18.608 1.00 41.85 O
ATOM 4 OP2 G B 35 3.806 -9.287 18.103 1.00 38.66 O
ATOM 5 O5' G B 35 2.588 -8.405 20.132 1.00 33.24 O
ATOM 6 C5' G B 35 2.062 -7.385 20.971 1.00 31.10 C
ATOM 7 C4' G B 35 1.614 -7.964 22.289 1.00 29.19 C
ATOM 8 O4' G B 35 0.567 -8.932 22.033 1.00 30.25 O
ATOM 9 C3' G B 35 2.651 -8.763 23.066 1.00 27.61 C
ATOM 10 O3' G B 35 3.539 -7.963 23.824 1.00 27.36 O
ATOM 11 C2' G B 35 1.783 -9.665 23.931 1.00 27.47 C
ATOM 12 O2' G B 35 1.234 -8.931 25.017 1.00 27.52 O
ATOM 13 C1' G B 35 0.658 -9.996 22.952 1.00 30.14 C
ATOM 14 N9 G B 35 0.916 -11.229 22.186 1.00 27.62 N
ATOM 15 C8 G B 35 1.237 -11.329 20.856 1.00 29.78 C
ATOM 16 N7 G B 35 1.394 -12.566 20.458 1.00 28.91 N
ATOM 17 C5 G B 35 1.151 -13.335 21.594 1.00 29.64 C
ATOM 18 C6 G B 35 1.161 -14.746 21.791 1.00 26.16 C
ATOM 19 O6 G B 35 1.393 -15.641 20.982 1.00 24.83 O
ATOM 20 N1 G B 35 0.861 -15.105 23.099 1.00 25.31 N
ATOM 21 C2 G B 35 0.571 -14.201 24.092 1.00 29.07 C
ATOM 22 N2 G B 35 0.304 -14.731 25.287 1.00 28.02 N
ATOM 23 N3 G B 35 0.543 -12.881 23.932 1.00 27.55 N
ATOM 24 C4 G B 35 0.842 -12.518 22.667 1.00 28.78 C
ATOM 25 P C B 36 5.046 -8.457 24.092 1.00 30.61 P
ATOM 26 OP1 C B 36 5.736 -7.271 24.656 1.00 32.38 O
ATOM 27 OP2 C B 36 5.519 -9.095 22.845 1.00 32.27 O
ATOM 28 O5' C B 36 4.907 -9.546 25.223 1.00 29.26 O
TER
ATOM 2 P C A 71 11.197 -7.310 15.919 1.00 34.01 P
ATOM 3 OP1 C A 71 10.748 -8.052 17.123 1.00 31.52 O
ATOM 4 OP2 C A 71 10.690 -7.659 14.577 1.00 34.79 O
ATOM 5 O5' C A 71 10.968 -5.758 16.209 1.00 32.37 O
ATOM 6 C5' C A 71 11.466 -4.740 15.344 1.00 35.06 C
ATOM 7 C4' C A 71 10.887 -3.382 15.664 1.00 35.43 C
ATOM 8 O4' C A 71 9.460 -3.389 15.381 1.00 37.45 O
ATOM 9 C3' C A 71 11.037 -2.898 17.111 1.00 37.35 C
ATOM 10 O3' C A 71 11.211 -1.482 17.109 1.00 37.46 O
ATOM 11 C2' C A 71 9.661 -3.209 17.701 1.00 37.69 C
ATOM 12 O2' C A 71 9.301 -2.451 18.838 1.00 37.83 O
ATOM 13 C1' C A 71 8.763 -2.887 16.508 1.00 39.35 C
ATOM 14 N1 C A 71 7.394 -3.455 16.606 1.00 45.04 N
ATOM 15 C2 C A 71 6.296 -2.661 16.234 1.00 46.85 C
ATOM 16 O2 C A 71 6.489 -1.506 15.822 1.00 45.80 O
ATOM 17 N3 C A 71 5.044 -3.173 16.333 1.00 47.47 N
ATOM 18 C4 C A 71 4.865 -4.419 16.783 1.00 46.22 C
ATOM 19 N4 C A 71 3.615 -4.883 16.860 1.00 45.44 N
ATOM 20 C5 C A 71 5.960 -5.242 17.177 1.00 44.47 C
ATOM 21 C6 C A 71 7.193 -4.727 17.075 1.00 43.01 C
ATOM 22 P A A 72 12.628 -0.722 17.216 1.00 38.62 P
ATOM 23 OP1 A A 72 12.261 0.497 17.980 1.00 43.72 O
ATOM 24 OP2 A A 72 13.163 -0.595 15.837 1.00 34.56 O
ATOM 25 O5' A A 72 13.598 -1.616 18.094 1.00 31.08 O
TER
ATOM 1 O3' C B 34 1.664 -7.995 17.864 1.00 41.92 O
ATOM 2 P G B 35 3.074 -8.114 18.643 1.00 43.52 P
ATOM 3 OP1 G B 35 3.717 -6.779 18.608 1.00 41.85 O
ATOM 4 OP2 G B 35 3.806 -9.287 18.103 1.00 38.66 O
ATOM 5 O5' G B 35 2.588 -8.405 20.132 1.00 33.24 O
ATOM 6 C5' G B 35 2.062 -7.385 20.971 1.00 31.10 C
ATOM 7 C4' G B 35 1.614 -7.964 22.289 1.00 29.19 C
ATOM 8 O4' G B 35 0.567 -8.932 22.033 1.00 30.25 O
ATOM 9 C3' G B 35 2.651 -8.763 23.066 1.00 27.61 C
ATOM 10 O3' G B 35 3.539 -7.963 23.824 1.00 27.36 O
ATOM 11 C2' G B 35 1.783 -9.665 23.931 1.00 27.47 C
ATOM 12 O2' G B 35 1.234 -8.931 25.017 1.00 27.52 O
ATOM 13 C1' G B 35 0.658 -9.996 22.952 1.00 30.14 C
ATOM 14 N9 G B 35 0.916 -11.229 22.186 1.00 27.62 N
ATOM 15 C8 G B 35 1.237 -11.329 20.856 1.00 29.78 C
ATOM 16 N7 G B 35 1.394 -12.566 20.458 1.00 28.91 N
ATOM 17 C5 G B 35 1.151 -13.335 21.594 1.00 29.64 C
ATOM 18 C6 G B 35 1.161 -14.746 21.791 1.00 26.16 C
ATOM 19 O6 G B 35 1.393 -15.641 20.982 1.00 24.83 O
ATOM 20 N1 G B 35 0.861 -15.105 23.099 1.00 25.31 N
ATOM 21 C2 G B 35 0.571 -14.201 24.092 1.00 29.07 C
ATOM 22 N2 G B 35 0.304 -14.731 25.287 1.00 28.02 N
ATOM 23 N3 G B 35 0.543 -12.881 23.932 1.00 27.55 N
ATOM 24 C4 G B 35 0.842 -12.518 22.667 1.00 28.78 C
ATOM 25 P C B 36 5.046 -8.457 24.092 1.00 30.61 P
ATOM 26 OP1 C B 36 5.736 -7.271 24.656 1.00 32.38 O
ATOM 27 OP2 C B 36 5.519 -9.095 22.845 1.00 32.27 O
ATOM 28 O5' C B 36 4.907 -9.546 25.223 1.00 29.26 O
TER
Atoms:
C2: (6.296,-2.661,16.234)
OP1: (10.748,-8.052,17.123)
OP2: (10.690,-7.659,14.577)
C4: (4.865,-4.419,16.783)
O5': (10.968,-5.758,16.209)
C3': (11.037,-2.898,17.111)
C1': (8.763,-2.887,16.508)
O4': (9.460,-3.389,15.381)
C5': (11.466,-4.740,15.344)
P: (11.197,-7.310,15.919)
O2: (6.489,-1.506,15.822)
C4': (10.887,-3.382,15.664)
C2': (9.661,-3.209,17.701)
O2': (9.301,-2.451,18.838)
N1: (7.394,-3.455,16.606)
N3: (5.044,-3.173,16.333)
N4: (3.615,-4.883,16.860)
C6: (7.193,-4.727,17.075)
C5: (5.960,-5.242,17.177)
O3': (11.211,-1.482,17.109)
OP1: (10.748,-8.052,17.123)
OP2: (10.690,-7.659,14.577)
C4: (4.865,-4.419,16.783)
O5': (10.968,-5.758,16.209)
C3': (11.037,-2.898,17.111)
C1': (8.763,-2.887,16.508)
O4': (9.460,-3.389,15.381)
C5': (11.466,-4.740,15.344)
P: (11.197,-7.310,15.919)
O2: (6.489,-1.506,15.822)
C4': (10.887,-3.382,15.664)
C2': (9.661,-3.209,17.701)
O2': (9.301,-2.451,18.838)
N1: (7.394,-3.455,16.606)
N3: (5.044,-3.173,16.333)
N4: (3.615,-4.883,16.860)
C6: (7.193,-4.727,17.075)
C5: (5.960,-5.242,17.177)
O3': (11.211,-1.482,17.109)
OP1: (3.717,-6.779,18.608)
OP2: (3.806,-9.287,18.103)
C3': (2.651,-8.763,23.066)
C1': (0.658,-9.996,22.952)
C5': (2.062,-7.385,20.971)
O6: (1.393,-15.641,20.982)
O4': (0.567,-8.932,22.033)
C8: (1.237,-11.329,20.856)
C2: (0.571,-14.201,24.092)
C6: (1.161,-14.746,21.791)
C5: (1.151,-13.335,21.594)
C4: (0.842,-12.518,22.667)
P: (3.074,-8.114,18.643)
C4': (1.614,-7.964,22.289)
C2': (1.783,-9.665,23.931)
O2': (1.234,-8.931,25.017)
N1: (0.861,-15.105,23.099)
N2: (0.304,-14.731,25.287)
N3: (0.543,-12.881,23.932)
N7: (1.394,-12.566,20.458)
N9: (0.916,-11.229,22.186)
O5': (2.588,-8.405,20.132)
O3': (3.539,-7.963,23.824)
OP2: (3.806,-9.287,18.103)
C3': (2.651,-8.763,23.066)
C1': (0.658,-9.996,22.952)
C5': (2.062,-7.385,20.971)
O6: (1.393,-15.641,20.982)
O4': (0.567,-8.932,22.033)
C8: (1.237,-11.329,20.856)
C2: (0.571,-14.201,24.092)
C6: (1.161,-14.746,21.791)
C5: (1.151,-13.335,21.594)
C4: (0.842,-12.518,22.667)
P: (3.074,-8.114,18.643)
C4': (1.614,-7.964,22.289)
C2': (1.783,-9.665,23.931)
O2': (1.234,-8.931,25.017)
N1: (0.861,-15.105,23.099)
N2: (0.304,-14.731,25.287)
N3: (0.543,-12.881,23.932)
N7: (1.394,-12.566,20.458)
N9: (0.916,-11.229,22.186)
O5': (2.588,-8.405,20.132)
O3': (3.539,-7.963,23.824)
Image (generated by PyMOL):