Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:B41:B39
Extra
PDB:
ATOM 1 O3' C A 40 -116.401 165.856 108.605 1.00 44.89 O
ATOM 2 P C A 41 -117.540 166.770 109.278 1.00 50.84 P
ATOM 3 OP1 C A 41 -118.149 167.570 108.191 1.00 50.84 O
ATOM 4 OP2 C A 41 -116.914 167.486 110.422 1.00 50.84 O
ATOM 5 O5' C A 41 -118.593 165.696 109.810 1.00 50.84 O
ATOM 6 C5' C A 41 -119.725 165.359 109.027 1.00 50.84 C
ATOM 7 C4' C A 41 -120.499 164.198 109.604 1.00 50.84 C
ATOM 8 O4' C A 41 -119.591 163.166 110.060 1.00 50.84 O
ATOM 9 C3' C A 41 -121.367 164.468 110.829 1.00 50.84 C
ATOM 10 O3' C A 41 -122.573 165.141 110.527 1.00 50.84 O
ATOM 11 C2' C A 41 -121.584 163.061 111.349 1.00 50.84 C
ATOM 12 O2' C A 41 -122.525 162.371 110.529 1.00 50.84 O
ATOM 13 C1' C A 41 -120.198 162.450 111.117 1.00 50.84 C
ATOM 14 N1 C A 41 -119.331 162.537 112.321 1.00 51.01 N
ATOM 15 C2 C A 41 -119.645 161.753 113.443 1.00 51.01 C
ATOM 16 O2 C A 41 -120.648 161.026 113.416 1.00 51.01 O
ATOM 17 N3 C A 41 -118.856 161.802 114.547 1.00 51.01 N
ATOM 18 C4 C A 41 -117.778 162.590 114.563 1.00 51.01 C
ATOM 19 N4 C A 41 -117.034 162.596 115.675 1.00 51.01 N
ATOM 20 C5 C A 41 -117.427 163.394 113.437 1.00 51.01 C
ATOM 21 C6 C A 41 -118.218 163.333 112.349 1.00 51.01 C
ATOM 22 P G A 42 -122.561 166.717 110.244 1.00 51.19 P
ATOM 23 OP1 G A 42 -123.254 166.929 108.952 1.00 51.19 O
ATOM 24 OP2 G A 42 -121.163 167.174 110.381 1.00 51.19 O
ATOM 25 O5' G A 42 -123.437 167.301 111.442 1.00 51.19 O
TER
ATOM 1 O3' U B 38 -115.001 164.828 114.752 1.00 61.61 O
ATOM 2 P G B 39 -113.899 163.906 115.473 1.00 65.39 P
ATOM 3 OP1 G B 39 -114.074 162.517 114.955 1.00 65.39 O
ATOM 4 OP2 G B 39 -114.028 164.143 116.929 1.00 65.39 O
ATOM 5 O5' G B 39 -112.527 164.521 114.938 1.00 65.39 O
ATOM 6 C5' G B 39 -112.320 164.763 113.549 1.00 65.39 C
ATOM 7 C4' G B 39 -110.968 165.379 113.296 1.00 65.39 C
ATOM 8 O4' G B 39 -109.965 164.653 114.025 1.00 65.39 O
ATOM 9 C3' G B 39 -110.467 165.366 111.855 1.00 65.39 C
ATOM 10 O3' G B 39 -110.974 166.459 111.100 1.00 65.39 O
ATOM 11 C2' G B 39 -108.939 165.393 112.002 1.00 65.39 C
ATOM 12 O2' G B 39 -108.446 166.727 111.963 1.00 65.39 O
ATOM 13 C1' G B 39 -108.715 164.829 113.411 1.00 65.39 C
ATOM 14 N9 G B 39 -107.994 163.548 113.414 1.00 65.53 N
ATOM 15 C8 G B 39 -108.344 162.381 112.805 1.00 65.53 C
ATOM 16 N7 G B 39 -107.483 161.422 113.024 1.00 65.53 N
ATOM 17 C5 G B 39 -106.512 162.002 113.838 1.00 65.53 C
ATOM 18 C6 G B 39 -105.319 161.463 114.401 1.00 65.53 C
ATOM 19 O6 G B 39 -104.868 160.318 114.287 1.00 65.53 O
ATOM 20 N1 G B 39 -104.618 162.404 115.162 1.00 65.53 N
ATOM 21 C2 G B 39 -105.015 163.704 115.359 1.00 65.53 C
ATOM 22 N2 G B 39 -104.198 164.443 116.126 1.00 65.53 N
ATOM 23 N3 G B 39 -106.124 164.223 114.843 1.00 65.53 N
ATOM 24 C4 G B 39 -106.817 163.323 114.096 1.00 65.53 C
ATOM 25 P C B 40 -111.179 166.343 109.506 1.00 44.89 P
ATOM 26 OP1 C B 40 -109.849 166.019 108.902 1.00 44.89 O
ATOM 27 OP2 C B 40 -111.877 167.591 109.075 1.00 44.89 O
ATOM 28 O5' C B 40 -112.157 165.096 109.368 1.00 44.89 O
TER
ATOM 2 P C A 41 -117.540 166.770 109.278 1.00 50.84 P
ATOM 3 OP1 C A 41 -118.149 167.570 108.191 1.00 50.84 O
ATOM 4 OP2 C A 41 -116.914 167.486 110.422 1.00 50.84 O
ATOM 5 O5' C A 41 -118.593 165.696 109.810 1.00 50.84 O
ATOM 6 C5' C A 41 -119.725 165.359 109.027 1.00 50.84 C
ATOM 7 C4' C A 41 -120.499 164.198 109.604 1.00 50.84 C
ATOM 8 O4' C A 41 -119.591 163.166 110.060 1.00 50.84 O
ATOM 9 C3' C A 41 -121.367 164.468 110.829 1.00 50.84 C
ATOM 10 O3' C A 41 -122.573 165.141 110.527 1.00 50.84 O
ATOM 11 C2' C A 41 -121.584 163.061 111.349 1.00 50.84 C
ATOM 12 O2' C A 41 -122.525 162.371 110.529 1.00 50.84 O
ATOM 13 C1' C A 41 -120.198 162.450 111.117 1.00 50.84 C
ATOM 14 N1 C A 41 -119.331 162.537 112.321 1.00 51.01 N
ATOM 15 C2 C A 41 -119.645 161.753 113.443 1.00 51.01 C
ATOM 16 O2 C A 41 -120.648 161.026 113.416 1.00 51.01 O
ATOM 17 N3 C A 41 -118.856 161.802 114.547 1.00 51.01 N
ATOM 18 C4 C A 41 -117.778 162.590 114.563 1.00 51.01 C
ATOM 19 N4 C A 41 -117.034 162.596 115.675 1.00 51.01 N
ATOM 20 C5 C A 41 -117.427 163.394 113.437 1.00 51.01 C
ATOM 21 C6 C A 41 -118.218 163.333 112.349 1.00 51.01 C
ATOM 22 P G A 42 -122.561 166.717 110.244 1.00 51.19 P
ATOM 23 OP1 G A 42 -123.254 166.929 108.952 1.00 51.19 O
ATOM 24 OP2 G A 42 -121.163 167.174 110.381 1.00 51.19 O
ATOM 25 O5' G A 42 -123.437 167.301 111.442 1.00 51.19 O
TER
ATOM 1 O3' U B 38 -115.001 164.828 114.752 1.00 61.61 O
ATOM 2 P G B 39 -113.899 163.906 115.473 1.00 65.39 P
ATOM 3 OP1 G B 39 -114.074 162.517 114.955 1.00 65.39 O
ATOM 4 OP2 G B 39 -114.028 164.143 116.929 1.00 65.39 O
ATOM 5 O5' G B 39 -112.527 164.521 114.938 1.00 65.39 O
ATOM 6 C5' G B 39 -112.320 164.763 113.549 1.00 65.39 C
ATOM 7 C4' G B 39 -110.968 165.379 113.296 1.00 65.39 C
ATOM 8 O4' G B 39 -109.965 164.653 114.025 1.00 65.39 O
ATOM 9 C3' G B 39 -110.467 165.366 111.855 1.00 65.39 C
ATOM 10 O3' G B 39 -110.974 166.459 111.100 1.00 65.39 O
ATOM 11 C2' G B 39 -108.939 165.393 112.002 1.00 65.39 C
ATOM 12 O2' G B 39 -108.446 166.727 111.963 1.00 65.39 O
ATOM 13 C1' G B 39 -108.715 164.829 113.411 1.00 65.39 C
ATOM 14 N9 G B 39 -107.994 163.548 113.414 1.00 65.53 N
ATOM 15 C8 G B 39 -108.344 162.381 112.805 1.00 65.53 C
ATOM 16 N7 G B 39 -107.483 161.422 113.024 1.00 65.53 N
ATOM 17 C5 G B 39 -106.512 162.002 113.838 1.00 65.53 C
ATOM 18 C6 G B 39 -105.319 161.463 114.401 1.00 65.53 C
ATOM 19 O6 G B 39 -104.868 160.318 114.287 1.00 65.53 O
ATOM 20 N1 G B 39 -104.618 162.404 115.162 1.00 65.53 N
ATOM 21 C2 G B 39 -105.015 163.704 115.359 1.00 65.53 C
ATOM 22 N2 G B 39 -104.198 164.443 116.126 1.00 65.53 N
ATOM 23 N3 G B 39 -106.124 164.223 114.843 1.00 65.53 N
ATOM 24 C4 G B 39 -106.817 163.323 114.096 1.00 65.53 C
ATOM 25 P C B 40 -111.179 166.343 109.506 1.00 44.89 P
ATOM 26 OP1 C B 40 -109.849 166.019 108.902 1.00 44.89 O
ATOM 27 OP2 C B 40 -111.877 167.591 109.075 1.00 44.89 O
ATOM 28 O5' C B 40 -112.157 165.096 109.368 1.00 44.89 O
TER
Atoms:
C2: (-119.645,161.753,113.443)
OP1: (-118.149,167.570,108.191)
OP2: (-116.914,167.486,110.422)
C4: (-117.778,162.590,114.563)
O5': (-118.593,165.696,109.810)
C3': (-121.367,164.468,110.829)
C1': (-120.198,162.450,111.117)
O4': (-119.591,163.166,110.060)
C5': (-119.725,165.359,109.027)
P: (-117.540,166.770,109.278)
O2: (-120.648,161.026,113.416)
C4': (-120.499,164.198,109.604)
C2': (-121.584,163.061,111.349)
O2': (-122.525,162.371,110.529)
N1: (-119.331,162.537,112.321)
N3: (-118.856,161.802,114.547)
N4: (-117.034,162.596,115.675)
C6: (-118.218,163.333,112.349)
C5: (-117.427,163.394,113.437)
O3': (-122.573,165.141,110.527)
OP1: (-118.149,167.570,108.191)
OP2: (-116.914,167.486,110.422)
C4: (-117.778,162.590,114.563)
O5': (-118.593,165.696,109.810)
C3': (-121.367,164.468,110.829)
C1': (-120.198,162.450,111.117)
O4': (-119.591,163.166,110.060)
C5': (-119.725,165.359,109.027)
P: (-117.540,166.770,109.278)
O2: (-120.648,161.026,113.416)
C4': (-120.499,164.198,109.604)
C2': (-121.584,163.061,111.349)
O2': (-122.525,162.371,110.529)
N1: (-119.331,162.537,112.321)
N3: (-118.856,161.802,114.547)
N4: (-117.034,162.596,115.675)
C6: (-118.218,163.333,112.349)
C5: (-117.427,163.394,113.437)
O3': (-122.573,165.141,110.527)
OP1: (-114.074,162.517,114.955)
OP2: (-114.028,164.143,116.929)
C3': (-110.467,165.366,111.855)
C1': (-108.715,164.829,113.411)
C5': (-112.320,164.763,113.549)
O6: (-104.868,160.318,114.287)
O4': (-109.965,164.653,114.025)
C8: (-108.344,162.381,112.805)
C2: (-105.015,163.704,115.359)
C6: (-105.319,161.463,114.401)
C5: (-106.512,162.002,113.838)
C4: (-106.817,163.323,114.096)
P: (-113.899,163.906,115.473)
C4': (-110.968,165.379,113.296)
C2': (-108.939,165.393,112.002)
O2': (-108.446,166.727,111.963)
N1: (-104.618,162.404,115.162)
N2: (-104.198,164.443,116.126)
N3: (-106.124,164.223,114.843)
N7: (-107.483,161.422,113.024)
N9: (-107.994,163.548,113.414)
O5': (-112.527,164.521,114.938)
O3': (-110.974,166.459,111.100)
OP2: (-114.028,164.143,116.929)
C3': (-110.467,165.366,111.855)
C1': (-108.715,164.829,113.411)
C5': (-112.320,164.763,113.549)
O6: (-104.868,160.318,114.287)
O4': (-109.965,164.653,114.025)
C8: (-108.344,162.381,112.805)
C2: (-105.015,163.704,115.359)
C6: (-105.319,161.463,114.401)
C5: (-106.512,162.002,113.838)
C4: (-106.817,163.323,114.096)
P: (-113.899,163.906,115.473)
C4': (-110.968,165.379,113.296)
C2': (-108.939,165.393,112.002)
O2': (-108.446,166.727,111.963)
N1: (-104.618,162.404,115.162)
N2: (-104.198,164.443,116.126)
N3: (-106.124,164.223,114.843)
N7: (-107.483,161.422,113.024)
N9: (-107.994,163.548,113.414)
O5': (-112.527,164.521,114.938)
O3': (-110.974,166.459,111.100)
Image (generated by PyMOL):