Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A78:A35
Extra
PDB:
ATOM 1 O3' G A 77 18.003 -23.818 19.041 1.00 42.18 O
ATOM 2 P C A 78 17.698 -25.370 19.341 1.00 40.90 P
ATOM 3 OP1 C A 78 18.813 -26.157 18.759 1.00 40.75 O
ATOM 4 OP2 C A 78 16.317 -25.643 18.876 1.00 41.56 O
ATOM 5 O5' C A 78 17.760 -25.445 20.931 1.00 41.36 O
ATOM 6 C5' C A 78 16.820 -24.744 21.744 1.00 40.33 C
ATOM 7 C4' C A 78 17.309 -24.632 23.167 1.00 36.48 C
ATOM 8 O4' C A 78 16.229 -24.151 24.025 1.00 32.74 O
ATOM 9 C3' C A 78 17.801 -25.948 23.790 1.00 37.27 C
ATOM 10 O3' C A 78 18.970 -25.706 24.572 1.00 37.92 O
ATOM 11 C2' C A 78 16.649 -26.337 24.709 1.00 36.92 C
ATOM 12 O2' C A 78 17.013 -27.162 25.793 1.00 41.36 O
ATOM 13 C1' C A 78 16.169 -24.970 25.173 1.00 35.34 C
ATOM 14 N1 C A 78 14.791 -24.971 25.723 1.00 34.84 N
ATOM 15 C2 C A 78 14.518 -24.210 26.870 1.00 35.43 C
ATOM 16 O2 C A 78 15.410 -23.496 27.346 1.00 38.21 O
ATOM 17 N3 C A 78 13.282 -24.239 27.422 1.00 30.19 N
ATOM 18 C4 C A 78 12.344 -25.018 26.885 1.00 31.57 C
ATOM 19 N4 C A 78 11.138 -25.026 27.452 1.00 37.63 N
ATOM 20 C5 C A 78 12.595 -25.817 25.735 1.00 30.36 C
ATOM 21 C6 C A 78 13.824 -25.783 25.200 1.00 32.16 C
ATOM 22 P A A 79 20.239 -26.685 24.447 1.00 54.23 P
ATOM 23 OP1 A A 79 21.189 -26.047 23.502 1.00 56.65 O
ATOM 24 OP2 A A 79 19.719 -28.037 24.132 1.00 53.05 O
ATOM 25 O5' A A 79 20.846 -26.669 25.920 1.00 49.21 O
TER
ATOM 1 O3' U B 34 7.775 -24.625 27.259 1.00 31.18 O
ATOM 2 P G B 35 7.745 -26.188 27.641 1.00 33.52 P
ATOM 3 OP1 G B 35 6.343 -26.647 27.485 1.00 36.83 O
ATOM 4 OP2 G B 35 8.399 -26.333 28.964 1.00 38.22 O
ATOM 5 O5' G B 35 8.659 -26.837 26.515 1.00 40.15 O
ATOM 6 C5' G B 35 8.393 -28.144 26.013 1.00 38.16 C
ATOM 7 C4' G B 35 8.470 -28.178 24.508 1.00 32.11 C
ATOM 8 O4' G B 35 9.792 -27.745 24.086 1.00 30.41 O
ATOM 9 C3' G B 35 8.230 -29.550 23.859 1.00 31.60 C
ATOM 10 O3' G B 35 7.344 -29.410 22.749 1.00 30.33 O
ATOM 11 C2' G B 35 9.617 -29.953 23.351 1.00 31.19 C
ATOM 12 O2' G B 35 9.600 -30.770 22.199 1.00 31.36 O
ATOM 13 C1' G B 35 10.252 -28.597 23.065 1.00 29.81 C
ATOM 14 N9 G B 35 11.721 -28.601 23.072 1.00 29.72 N
ATOM 15 C8 G B 35 12.563 -29.121 24.029 1.00 30.77 C
ATOM 16 N7 G B 35 13.828 -28.978 23.727 1.00 29.43 N
ATOM 17 C5 G B 35 13.834 -28.341 22.497 1.00 31.99 C
ATOM 18 C6 G B 35 14.918 -27.928 21.671 1.00 33.59 C
ATOM 19 O6 G B 35 16.138 -28.047 21.864 1.00 30.99 O
ATOM 20 N1 G B 35 14.462 -27.311 20.509 1.00 30.01 N
ATOM 21 C2 G B 35 13.143 -27.123 20.180 1.00 30.87 C
ATOM 22 N2 G B 35 12.907 -26.510 19.011 1.00 29.87 N
ATOM 23 N3 G B 35 12.128 -27.503 20.937 1.00 31.23 N
ATOM 24 C4 G B 35 12.540 -28.104 22.076 1.00 31.63 C
ATOM 25 P G B 36 5.766 -29.660 22.936 1.00 43.12 P
ATOM 26 OP1 G B 36 5.155 -29.620 21.584 1.00 40.83 O
ATOM 27 OP2 G B 36 5.291 -28.696 23.965 1.00 46.36 O
ATOM 28 O5' G B 36 5.698 -31.142 23.514 1.00 34.52 O
TER
ATOM 2 P C A 78 17.698 -25.370 19.341 1.00 40.90 P
ATOM 3 OP1 C A 78 18.813 -26.157 18.759 1.00 40.75 O
ATOM 4 OP2 C A 78 16.317 -25.643 18.876 1.00 41.56 O
ATOM 5 O5' C A 78 17.760 -25.445 20.931 1.00 41.36 O
ATOM 6 C5' C A 78 16.820 -24.744 21.744 1.00 40.33 C
ATOM 7 C4' C A 78 17.309 -24.632 23.167 1.00 36.48 C
ATOM 8 O4' C A 78 16.229 -24.151 24.025 1.00 32.74 O
ATOM 9 C3' C A 78 17.801 -25.948 23.790 1.00 37.27 C
ATOM 10 O3' C A 78 18.970 -25.706 24.572 1.00 37.92 O
ATOM 11 C2' C A 78 16.649 -26.337 24.709 1.00 36.92 C
ATOM 12 O2' C A 78 17.013 -27.162 25.793 1.00 41.36 O
ATOM 13 C1' C A 78 16.169 -24.970 25.173 1.00 35.34 C
ATOM 14 N1 C A 78 14.791 -24.971 25.723 1.00 34.84 N
ATOM 15 C2 C A 78 14.518 -24.210 26.870 1.00 35.43 C
ATOM 16 O2 C A 78 15.410 -23.496 27.346 1.00 38.21 O
ATOM 17 N3 C A 78 13.282 -24.239 27.422 1.00 30.19 N
ATOM 18 C4 C A 78 12.344 -25.018 26.885 1.00 31.57 C
ATOM 19 N4 C A 78 11.138 -25.026 27.452 1.00 37.63 N
ATOM 20 C5 C A 78 12.595 -25.817 25.735 1.00 30.36 C
ATOM 21 C6 C A 78 13.824 -25.783 25.200 1.00 32.16 C
ATOM 22 P A A 79 20.239 -26.685 24.447 1.00 54.23 P
ATOM 23 OP1 A A 79 21.189 -26.047 23.502 1.00 56.65 O
ATOM 24 OP2 A A 79 19.719 -28.037 24.132 1.00 53.05 O
ATOM 25 O5' A A 79 20.846 -26.669 25.920 1.00 49.21 O
TER
ATOM 1 O3' U B 34 7.775 -24.625 27.259 1.00 31.18 O
ATOM 2 P G B 35 7.745 -26.188 27.641 1.00 33.52 P
ATOM 3 OP1 G B 35 6.343 -26.647 27.485 1.00 36.83 O
ATOM 4 OP2 G B 35 8.399 -26.333 28.964 1.00 38.22 O
ATOM 5 O5' G B 35 8.659 -26.837 26.515 1.00 40.15 O
ATOM 6 C5' G B 35 8.393 -28.144 26.013 1.00 38.16 C
ATOM 7 C4' G B 35 8.470 -28.178 24.508 1.00 32.11 C
ATOM 8 O4' G B 35 9.792 -27.745 24.086 1.00 30.41 O
ATOM 9 C3' G B 35 8.230 -29.550 23.859 1.00 31.60 C
ATOM 10 O3' G B 35 7.344 -29.410 22.749 1.00 30.33 O
ATOM 11 C2' G B 35 9.617 -29.953 23.351 1.00 31.19 C
ATOM 12 O2' G B 35 9.600 -30.770 22.199 1.00 31.36 O
ATOM 13 C1' G B 35 10.252 -28.597 23.065 1.00 29.81 C
ATOM 14 N9 G B 35 11.721 -28.601 23.072 1.00 29.72 N
ATOM 15 C8 G B 35 12.563 -29.121 24.029 1.00 30.77 C
ATOM 16 N7 G B 35 13.828 -28.978 23.727 1.00 29.43 N
ATOM 17 C5 G B 35 13.834 -28.341 22.497 1.00 31.99 C
ATOM 18 C6 G B 35 14.918 -27.928 21.671 1.00 33.59 C
ATOM 19 O6 G B 35 16.138 -28.047 21.864 1.00 30.99 O
ATOM 20 N1 G B 35 14.462 -27.311 20.509 1.00 30.01 N
ATOM 21 C2 G B 35 13.143 -27.123 20.180 1.00 30.87 C
ATOM 22 N2 G B 35 12.907 -26.510 19.011 1.00 29.87 N
ATOM 23 N3 G B 35 12.128 -27.503 20.937 1.00 31.23 N
ATOM 24 C4 G B 35 12.540 -28.104 22.076 1.00 31.63 C
ATOM 25 P G B 36 5.766 -29.660 22.936 1.00 43.12 P
ATOM 26 OP1 G B 36 5.155 -29.620 21.584 1.00 40.83 O
ATOM 27 OP2 G B 36 5.291 -28.696 23.965 1.00 46.36 O
ATOM 28 O5' G B 36 5.698 -31.142 23.514 1.00 34.52 O
TER
Atoms:
C2: (14.518,-24.210,26.870)
OP1: (18.813,-26.157,18.759)
OP2: (16.317,-25.643,18.876)
C4: (12.344,-25.018,26.885)
O5': (17.760,-25.445,20.931)
C3': (17.801,-25.948,23.790)
C1': (16.169,-24.970,25.173)
O4': (16.229,-24.151,24.025)
C5': (16.820,-24.744,21.744)
P: (17.698,-25.370,19.341)
O2: (15.410,-23.496,27.346)
C4': (17.309,-24.632,23.167)
C2': (16.649,-26.337,24.709)
O2': (17.013,-27.162,25.793)
N1: (14.791,-24.971,25.723)
N3: (13.282,-24.239,27.422)
N4: (11.138,-25.026,27.452)
C6: (13.824,-25.783,25.200)
C5: (12.595,-25.817,25.735)
O3': (18.970,-25.706,24.572)
OP1: (18.813,-26.157,18.759)
OP2: (16.317,-25.643,18.876)
C4: (12.344,-25.018,26.885)
O5': (17.760,-25.445,20.931)
C3': (17.801,-25.948,23.790)
C1': (16.169,-24.970,25.173)
O4': (16.229,-24.151,24.025)
C5': (16.820,-24.744,21.744)
P: (17.698,-25.370,19.341)
O2: (15.410,-23.496,27.346)
C4': (17.309,-24.632,23.167)
C2': (16.649,-26.337,24.709)
O2': (17.013,-27.162,25.793)
N1: (14.791,-24.971,25.723)
N3: (13.282,-24.239,27.422)
N4: (11.138,-25.026,27.452)
C6: (13.824,-25.783,25.200)
C5: (12.595,-25.817,25.735)
O3': (18.970,-25.706,24.572)
OP1: (6.343,-26.647,27.485)
OP2: (8.399,-26.333,28.964)
C3': (8.230,-29.550,23.859)
C1': (10.252,-28.597,23.065)
C5': (8.393,-28.144,26.013)
O6: (16.138,-28.047,21.864)
O4': (9.792,-27.745,24.086)
C8: (12.563,-29.121,24.029)
C2: (13.143,-27.123,20.180)
C6: (14.918,-27.928,21.671)
C5: (13.834,-28.341,22.497)
C4: (12.540,-28.104,22.076)
P: (7.745,-26.188,27.641)
C4': (8.470,-28.178,24.508)
C2': (9.617,-29.953,23.351)
O2': (9.600,-30.770,22.199)
N1: (14.462,-27.311,20.509)
N2: (12.907,-26.510,19.011)
N3: (12.128,-27.503,20.937)
N7: (13.828,-28.978,23.727)
N9: (11.721,-28.601,23.072)
O5': (8.659,-26.837,26.515)
O3': (7.344,-29.410,22.749)
OP2: (8.399,-26.333,28.964)
C3': (8.230,-29.550,23.859)
C1': (10.252,-28.597,23.065)
C5': (8.393,-28.144,26.013)
O6: (16.138,-28.047,21.864)
O4': (9.792,-27.745,24.086)
C8: (12.563,-29.121,24.029)
C2: (13.143,-27.123,20.180)
C6: (14.918,-27.928,21.671)
C5: (13.834,-28.341,22.497)
C4: (12.540,-28.104,22.076)
P: (7.745,-26.188,27.641)
C4': (8.470,-28.178,24.508)
C2': (9.617,-29.953,23.351)
O2': (9.600,-30.770,22.199)
N1: (14.462,-27.311,20.509)
N2: (12.907,-26.510,19.011)
N3: (12.128,-27.503,20.937)
N7: (13.828,-28.978,23.727)
N9: (11.721,-28.601,23.072)
O5': (8.659,-26.837,26.515)
O3': (7.344,-29.410,22.749)
Image (generated by PyMOL):