Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11971:11972
Extra
PDB:
ATOM 1 O3' C A1970 14.012 -11.233 109.730 1.00 41.62 O
ATOM 2 P A A1971 15.143 -12.373 109.700 1.00 43.82 P
ATOM 3 OP1 A A1971 15.742 -12.367 108.377 1.00 43.43 O
ATOM 4 OP2 A A1971 14.491 -13.617 110.183 1.00 44.00 O
ATOM 5 O5' A A1971 16.226 -11.891 110.776 1.00 44.00 O
ATOM 6 C5' A A1971 16.643 -10.550 110.877 1.00 44.01 C
ATOM 7 C4' A A1971 17.364 -10.293 112.188 1.00 44.31 C
ATOM 8 O4' A A1971 16.509 -10.575 113.325 1.00 44.69 O
ATOM 9 C3' A A1971 18.565 -11.148 112.490 1.00 44.29 C
ATOM 10 O3' A A1971 19.693 -10.828 111.689 1.00 43.99 O
ATOM 11 C2' A A1971 18.754 -10.881 113.997 1.00 44.71 C
ATOM 12 O2' A A1971 19.337 -9.612 114.228 1.00 44.75 O
ATOM 13 C1' A A1971 17.312 -10.803 114.465 1.00 44.95 C
ATOM 14 N9 A A1971 16.884 -12.033 115.134 1.00 45.17 N
ATOM 15 C8 A A1971 15.976 -12.979 114.772 1.00 45.14 C
ATOM 16 N7 A A1971 15.866 -13.972 115.644 1.00 45.40 N
ATOM 17 C5 A A1971 16.751 -13.633 116.652 1.00 45.63 C
ATOM 18 C6 A A1971 17.098 -14.246 117.884 1.00 45.99 C
ATOM 19 N6 A A1971 16.592 -15.384 118.336 1.00 46.18 N
ATOM 20 N1 A A1971 18.025 -13.650 118.647 1.00 46.15 N
ATOM 21 C2 A A1971 18.536 -12.505 118.183 1.00 45.97 C
ATOM 22 N3 A A1971 18.294 -11.818 117.071 1.00 45.65 N
ATOM 23 C4 A A1971 17.379 -12.442 116.334 1.00 45.49 C
ATOM 24 P G A1972 20.665 -11.990 111.182 1.00 47.35 P
ATOM 25 OP1 G A1972 21.713 -11.345 110.387 1.00 47.07 O
ATOM 26 OP2 G A1972 19.865 -13.048 110.562 1.00 47.23 O
ATOM 27 O5' G A1972 21.255 -12.546 112.530 1.00 47.68 O
TER
ATOM 1 O3' A B1971 19.693 -10.828 111.689 1.00 43.99 O
ATOM 2 P G B1972 20.665 -11.990 111.182 1.00 47.35 P
ATOM 3 OP1 G B1972 21.713 -11.345 110.387 1.00 47.07 O
ATOM 4 OP2 G B1972 19.865 -13.048 110.562 1.00 47.23 O
ATOM 5 O5' G B1972 21.255 -12.546 112.530 1.00 47.68 O
ATOM 6 C5' G B1972 22.529 -12.137 112.970 1.00 47.73 C
ATOM 7 C4' G B1972 22.872 -12.802 114.245 1.00 48.08 C
ATOM 8 O4' G B1972 21.727 -12.785 115.122 1.00 48.40 O
ATOM 9 C3' G B1972 23.227 -14.250 114.130 1.00 48.04 C
ATOM 10 O3' G B1972 24.560 -14.400 113.709 1.00 47.85 O
ATOM 11 C2' G B1972 22.971 -14.739 115.552 1.00 48.48 C
ATOM 12 O2' G B1972 24.014 -14.345 116.398 1.00 48.68 O
ATOM 13 C1' G B1972 21.743 -13.921 115.942 1.00 48.65 C
ATOM 14 N9 G B1972 20.514 -14.680 115.716 1.00 48.66 N
ATOM 15 C8 G B1972 19.643 -14.588 114.661 1.00 48.41 C
ATOM 16 N7 G B1972 18.662 -15.442 114.711 1.00 48.50 N
ATOM 17 C5 G B1972 18.965 -16.136 115.851 1.00 48.83 C
ATOM 18 C6 G B1972 18.274 -17.195 116.387 1.00 49.06 C
ATOM 19 O6 G B1972 17.251 -17.644 115.881 1.00 49.00 O
ATOM 20 N1 G B1972 18.852 -17.669 117.554 1.00 49.39 N
ATOM 21 C2 G B1972 19.969 -17.143 118.120 1.00 49.48 C
ATOM 22 N2 G B1972 20.378 -17.700 119.250 1.00 49.83 N
ATOM 23 N3 G B1972 20.634 -16.126 117.633 1.00 49.27 N
ATOM 24 C4 G B1972 20.077 -15.692 116.495 1.00 48.94 C
ATOM 25 P A B1973 25.003 -15.388 112.509 1.00 44.66 P
ATOM 26 OP1 A B1973 26.485 -15.133 112.295 1.00 44.54 O
ATOM 27 OP2 A B1973 24.082 -15.167 111.364 1.00 44.38 O
ATOM 28 O5' A B1973 24.796 -16.829 113.156 1.00 44.89 O
TER
ATOM 2 P A A1971 15.143 -12.373 109.700 1.00 43.82 P
ATOM 3 OP1 A A1971 15.742 -12.367 108.377 1.00 43.43 O
ATOM 4 OP2 A A1971 14.491 -13.617 110.183 1.00 44.00 O
ATOM 5 O5' A A1971 16.226 -11.891 110.776 1.00 44.00 O
ATOM 6 C5' A A1971 16.643 -10.550 110.877 1.00 44.01 C
ATOM 7 C4' A A1971 17.364 -10.293 112.188 1.00 44.31 C
ATOM 8 O4' A A1971 16.509 -10.575 113.325 1.00 44.69 O
ATOM 9 C3' A A1971 18.565 -11.148 112.490 1.00 44.29 C
ATOM 10 O3' A A1971 19.693 -10.828 111.689 1.00 43.99 O
ATOM 11 C2' A A1971 18.754 -10.881 113.997 1.00 44.71 C
ATOM 12 O2' A A1971 19.337 -9.612 114.228 1.00 44.75 O
ATOM 13 C1' A A1971 17.312 -10.803 114.465 1.00 44.95 C
ATOM 14 N9 A A1971 16.884 -12.033 115.134 1.00 45.17 N
ATOM 15 C8 A A1971 15.976 -12.979 114.772 1.00 45.14 C
ATOM 16 N7 A A1971 15.866 -13.972 115.644 1.00 45.40 N
ATOM 17 C5 A A1971 16.751 -13.633 116.652 1.00 45.63 C
ATOM 18 C6 A A1971 17.098 -14.246 117.884 1.00 45.99 C
ATOM 19 N6 A A1971 16.592 -15.384 118.336 1.00 46.18 N
ATOM 20 N1 A A1971 18.025 -13.650 118.647 1.00 46.15 N
ATOM 21 C2 A A1971 18.536 -12.505 118.183 1.00 45.97 C
ATOM 22 N3 A A1971 18.294 -11.818 117.071 1.00 45.65 N
ATOM 23 C4 A A1971 17.379 -12.442 116.334 1.00 45.49 C
ATOM 24 P G A1972 20.665 -11.990 111.182 1.00 47.35 P
ATOM 25 OP1 G A1972 21.713 -11.345 110.387 1.00 47.07 O
ATOM 26 OP2 G A1972 19.865 -13.048 110.562 1.00 47.23 O
ATOM 27 O5' G A1972 21.255 -12.546 112.530 1.00 47.68 O
TER
ATOM 1 O3' A B1971 19.693 -10.828 111.689 1.00 43.99 O
ATOM 2 P G B1972 20.665 -11.990 111.182 1.00 47.35 P
ATOM 3 OP1 G B1972 21.713 -11.345 110.387 1.00 47.07 O
ATOM 4 OP2 G B1972 19.865 -13.048 110.562 1.00 47.23 O
ATOM 5 O5' G B1972 21.255 -12.546 112.530 1.00 47.68 O
ATOM 6 C5' G B1972 22.529 -12.137 112.970 1.00 47.73 C
ATOM 7 C4' G B1972 22.872 -12.802 114.245 1.00 48.08 C
ATOM 8 O4' G B1972 21.727 -12.785 115.122 1.00 48.40 O
ATOM 9 C3' G B1972 23.227 -14.250 114.130 1.00 48.04 C
ATOM 10 O3' G B1972 24.560 -14.400 113.709 1.00 47.85 O
ATOM 11 C2' G B1972 22.971 -14.739 115.552 1.00 48.48 C
ATOM 12 O2' G B1972 24.014 -14.345 116.398 1.00 48.68 O
ATOM 13 C1' G B1972 21.743 -13.921 115.942 1.00 48.65 C
ATOM 14 N9 G B1972 20.514 -14.680 115.716 1.00 48.66 N
ATOM 15 C8 G B1972 19.643 -14.588 114.661 1.00 48.41 C
ATOM 16 N7 G B1972 18.662 -15.442 114.711 1.00 48.50 N
ATOM 17 C5 G B1972 18.965 -16.136 115.851 1.00 48.83 C
ATOM 18 C6 G B1972 18.274 -17.195 116.387 1.00 49.06 C
ATOM 19 O6 G B1972 17.251 -17.644 115.881 1.00 49.00 O
ATOM 20 N1 G B1972 18.852 -17.669 117.554 1.00 49.39 N
ATOM 21 C2 G B1972 19.969 -17.143 118.120 1.00 49.48 C
ATOM 22 N2 G B1972 20.378 -17.700 119.250 1.00 49.83 N
ATOM 23 N3 G B1972 20.634 -16.126 117.633 1.00 49.27 N
ATOM 24 C4 G B1972 20.077 -15.692 116.495 1.00 48.94 C
ATOM 25 P A B1973 25.003 -15.388 112.509 1.00 44.66 P
ATOM 26 OP1 A B1973 26.485 -15.133 112.295 1.00 44.54 O
ATOM 27 OP2 A B1973 24.082 -15.167 111.364 1.00 44.38 O
ATOM 28 O5' A B1973 24.796 -16.829 113.156 1.00 44.89 O
TER
Atoms:
OP1: (15.742,-12.367,108.377)
OP2: (14.491,-13.617,110.183)
C3': (18.565,-11.148,112.490)
C1': (17.312,-10.803,114.465)
C5': (16.643,-10.550,110.877)
O4': (16.509,-10.575,113.325)
C8: (15.976,-12.979,114.772)
O2': (19.337,-9.612,114.228)
C6: (17.098,-14.246,117.884)
C5: (16.751,-13.633,116.652)
C4: (17.379,-12.442,116.334)
P: (15.143,-12.373,109.700)
C4': (17.364,-10.293,112.188)
C2': (18.754,-10.881,113.997)
C2: (18.536,-12.505,118.183)
N1: (18.025,-13.650,118.647)
N3: (18.294,-11.818,117.071)
N6: (16.592,-15.384,118.336)
N7: (15.866,-13.972,115.644)
N9: (16.884,-12.033,115.134)
O5': (16.226,-11.891,110.776)
O3': (19.693,-10.828,111.689)
OP2: (14.491,-13.617,110.183)
C3': (18.565,-11.148,112.490)
C1': (17.312,-10.803,114.465)
C5': (16.643,-10.550,110.877)
O4': (16.509,-10.575,113.325)
C8: (15.976,-12.979,114.772)
O2': (19.337,-9.612,114.228)
C6: (17.098,-14.246,117.884)
C5: (16.751,-13.633,116.652)
C4: (17.379,-12.442,116.334)
P: (15.143,-12.373,109.700)
C4': (17.364,-10.293,112.188)
C2': (18.754,-10.881,113.997)
C2: (18.536,-12.505,118.183)
N1: (18.025,-13.650,118.647)
N3: (18.294,-11.818,117.071)
N6: (16.592,-15.384,118.336)
N7: (15.866,-13.972,115.644)
N9: (16.884,-12.033,115.134)
O5': (16.226,-11.891,110.776)
O3': (19.693,-10.828,111.689)
OP1: (21.713,-11.345,110.387)
OP2: (19.865,-13.048,110.562)
C3': (23.227,-14.250,114.130)
C1': (21.743,-13.921,115.942)
C5': (22.529,-12.137,112.970)
O6: (17.251,-17.644,115.881)
O4': (21.727,-12.785,115.122)
C8: (19.643,-14.588,114.661)
C2: (19.969,-17.143,118.120)
C6: (18.274,-17.195,116.387)
C5: (18.965,-16.136,115.851)
C4: (20.077,-15.692,116.495)
P: (20.665,-11.990,111.182)
C4': (22.872,-12.802,114.245)
C2': (22.971,-14.739,115.552)
O2': (24.014,-14.345,116.398)
N1: (18.852,-17.669,117.554)
N2: (20.378,-17.700,119.250)
N3: (20.634,-16.126,117.633)
N7: (18.662,-15.442,114.711)
N9: (20.514,-14.680,115.716)
O5': (21.255,-12.546,112.530)
O3': (24.560,-14.400,113.709)
OP2: (19.865,-13.048,110.562)
C3': (23.227,-14.250,114.130)
C1': (21.743,-13.921,115.942)
C5': (22.529,-12.137,112.970)
O6: (17.251,-17.644,115.881)
O4': (21.727,-12.785,115.122)
C8: (19.643,-14.588,114.661)
C2: (19.969,-17.143,118.120)
C6: (18.274,-17.195,116.387)
C5: (18.965,-16.136,115.851)
C4: (20.077,-15.692,116.495)
P: (20.665,-11.990,111.182)
C4': (22.872,-12.802,114.245)
C2': (22.971,-14.739,115.552)
O2': (24.014,-14.345,116.398)
N1: (18.852,-17.669,117.554)
N2: (20.378,-17.700,119.250)
N3: (20.634,-16.126,117.633)
N7: (18.662,-15.442,114.711)
N9: (20.514,-14.680,115.716)
O5': (21.255,-12.546,112.530)
O3': (24.560,-14.400,113.709)
Image (generated by PyMOL):