ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCV:B109:B110

Extra

PDB:
ATOM 1 O3' C A 108 25.971 13.999 17.193 1.00 37.35 O
ATOM 2 P A A 109 24.456 13.778 16.697 1.00 39.25 P
ATOM 3 OP1 A A 109 24.075 12.396 17.067 1.00 37.88 O
ATOM 4 OP2 A A 109 24.354 14.219 15.281 1.00 35.81 O
ATOM 5 O5' A A 109 23.607 14.798 17.581 1.00 39.80 O
ATOM 6 C5' A A 109 23.524 14.649 18.997 1.00 39.67 C
ATOM 7 C4' A A 109 22.710 15.774 19.596 1.00 38.94 C
ATOM 8 O4' A A 109 23.431 17.029 19.482 1.00 39.60 O
ATOM 9 C3' A A 109 21.392 16.065 18.904 1.00 39.44 C
ATOM 10 O3' A A 109 20.386 15.151 19.314 1.00 41.39 O
ATOM 11 C2' A A 109 21.104 17.490 19.361 1.00 39.70 C
ATOM 12 O2' A A 109 20.596 17.562 20.676 1.00 40.05 O
ATOM 13 C1' A A 109 22.504 18.096 19.344 1.00 38.54 C
ATOM 14 N9 A A 109 22.797 18.809 18.105 1.00 37.09 N
ATOM 15 C8 A A 109 23.576 18.396 17.053 1.00 36.12 C
ATOM 16 N7 A A 109 23.683 19.284 16.094 1.00 36.10 N
ATOM 17 C5 A A 109 22.913 20.351 16.539 1.00 36.27 C
ATOM 18 C6 A A 109 22.623 21.613 15.980 1.00 35.77 C
ATOM 19 N6 A A 109 23.096 22.035 14.805 1.00 33.52 N
ATOM 20 N1 A A 109 21.822 22.438 16.682 1.00 33.71 N
ATOM 21 C2 A A 109 21.347 22.019 17.863 1.00 36.85 C
ATOM 22 N3 A A 109 21.550 20.863 18.494 1.00 35.21 N
ATOM 23 C4 A A 109 22.352 20.066 17.771 1.00 36.77 C
ATOM 24 P G A 110 19.207 14.761 18.296 1.00 44.84 P
ATOM 25 OP1 G A 110 18.493 13.592 18.873 1.00 44.36 O
ATOM 26 OP2 G A 110 19.782 14.672 16.929 1.00 44.25 O
ATOM 27 O5' G A 110 18.248 16.033 18.323 1.00 42.51 O
TER

ATOM 1 O3' A B 109 20.386 15.151 19.314 1.00 41.39 O
ATOM 2 P G B 110 19.207 14.761 18.296 1.00 44.84 P
ATOM 3 OP1 G B 110 18.493 13.592 18.873 1.00 44.36 O
ATOM 4 OP2 G B 110 19.782 14.672 16.929 1.00 44.25 O
ATOM 5 O5' G B 110 18.248 16.033 18.323 1.00 42.51 O
ATOM 6 C5' G B 110 17.619 16.442 19.531 1.00 41.72 C
ATOM 7 C4' G B 110 16.962 17.787 19.349 1.00 41.66 C
ATOM 8 O4' G B 110 17.976 18.800 19.123 1.00 41.57 O
ATOM 9 C3' G B 110 16.062 17.924 18.134 1.00 42.90 C
ATOM 10 O3' G B 110 14.776 17.373 18.366 1.00 44.95 O
ATOM 11 C2' G B 110 16.004 19.433 17.959 1.00 42.14 C
ATOM 12 O2' G B 110 15.113 20.047 18.866 1.00 43.79 O
ATOM 13 C1' G B 110 17.442 19.827 18.300 1.00 40.15 C
ATOM 14 N9 G B 110 18.278 19.957 17.111 1.00 36.94 N
ATOM 15 C8 G B 110 19.164 19.036 16.601 1.00 36.49 C
ATOM 16 N7 G B 110 19.766 19.451 15.517 1.00 35.44 N
ATOM 17 C5 G B 110 19.247 20.721 15.301 1.00 33.50 C
ATOM 18 C6 G B 110 19.521 21.670 14.279 1.00 34.17 C
ATOM 19 O6 G B 110 20.303 21.576 13.330 1.00 34.54 O
ATOM 20 N1 G B 110 18.770 22.829 14.441 1.00 33.56 N
ATOM 21 C2 G B 110 17.869 23.051 15.452 1.00 33.55 C
ATOM 22 N2 G B 110 17.236 24.235 15.432 1.00 32.50 N
ATOM 23 N3 G B 110 17.605 22.178 16.410 1.00 31.94 N
ATOM 24 C4 G B 110 18.325 21.045 16.275 1.00 33.59 C
ATOM 25 P U B 111 13.935 16.787 17.130 1.00 48.03 P
ATOM 26 OP1 U B 111 12.807 16.019 17.714 1.00 47.92 O
ATOM 27 OP2 U B 111 14.857 16.119 16.179 1.00 45.94 O
ATOM 28 O5' U B 111 13.357 18.092 16.424 1.00 44.96 O
TER

Atoms:
OP1: (24.075,12.396,17.067)
OP2: (24.354,14.219,15.281)
C3': (21.392,16.065,18.904)
C1': (22.504,18.096,19.344)
C5': (23.524,14.649,18.997)
O4': (23.431,17.029,19.482)
C8: (23.576,18.396,17.053)
O2': (20.596,17.562,20.676)
C6: (22.623,21.613,15.980)
C5: (22.913,20.351,16.539)
C4: (22.352,20.066,17.771)
P: (24.456,13.778,16.697)
C4': (22.710,15.774,19.596)
C2': (21.104,17.490,19.361)
C2: (21.347,22.019,17.863)
N1: (21.822,22.438,16.682)
N3: (21.550,20.863,18.494)
N6: (23.096,22.035,14.805)
N7: (23.683,19.284,16.094)
N9: (22.797,18.809,18.105)
O5': (23.607,14.798,17.581)
O3': (20.386,15.151,19.314)
OP1: (18.493,13.592,18.873)
OP2: (19.782,14.672,16.929)
C3': (16.062,17.924,18.134)
C1': (17.442,19.827,18.300)
C5': (17.619,16.442,19.531)
O6: (20.303,21.576,13.330)
O4': (17.976,18.800,19.123)
C8: (19.164,19.036,16.601)
C2: (17.869,23.051,15.452)
C6: (19.521,21.670,14.279)
C5: (19.247,20.721,15.301)
C4: (18.325,21.045,16.275)
P: (19.207,14.761,18.296)
C4': (16.962,17.787,19.349)
C2': (16.004,19.433,17.959)
O2': (15.113,20.047,18.866)
N1: (18.770,22.829,14.441)
N2: (17.236,24.235,15.432)
N3: (17.605,22.178,16.410)
N7: (19.766,19.451,15.517)
N9: (18.278,19.957,17.111)
O5': (18.248,16.033,18.323)
O3': (14.776,17.373,18.366)
Image (generated by PyMOL):
PyMOL image
show in jmol