Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2013:A2014
Extra
PDB:
ATOM 1 O3' C A2012 45.400 123.367 119.382 1.00 27.20 O
ATOM 2 P A A2013 46.298 122.064 119.165 1.00 27.37 P
ATOM 3 OP1 A A2013 47.208 121.946 120.315 1.00 25.70 O
ATOM 4 OP2 A A2013 46.847 122.139 117.795 1.00 29.39 O
ATOM 5 O5' A A2013 45.259 120.874 119.235 1.00 25.67 O
ATOM 6 C5' A A2013 45.417 119.742 118.395 1.00 28.73 C
ATOM 7 C4' A A2013 44.311 118.768 118.648 1.00 29.33 C
ATOM 8 O4' A A2013 43.032 119.402 118.403 1.00 29.32 O
ATOM 9 C3' A A2013 44.325 117.598 117.700 1.00 28.39 C
ATOM 10 O3' A A2013 45.266 116.639 118.113 1.00 26.11 O
ATOM 11 C2' A A2013 42.879 117.141 117.751 1.00 29.23 C
ATOM 12 O2' A A2013 42.545 116.463 118.943 1.00 30.71 O
ATOM 13 C1' A A2013 42.167 118.490 117.749 1.00 30.04 C
ATOM 14 N9 A A2013 41.988 118.961 116.381 1.00 31.92 N
ATOM 15 C8 A A2013 42.723 119.914 115.727 1.00 33.01 C
ATOM 16 N7 A A2013 42.319 120.141 114.502 1.00 32.96 N
ATOM 17 C5 A A2013 41.243 119.282 114.342 1.00 31.40 C
ATOM 18 C6 A A2013 40.374 119.060 113.280 1.00 30.87 C
ATOM 19 N6 A A2013 40.433 119.729 112.131 1.00 30.02 N
ATOM 20 N1 A A2013 39.421 118.116 113.436 1.00 30.42 N
ATOM 21 C2 A A2013 39.358 117.451 114.585 1.00 29.92 C
ATOM 22 N3 A A2013 40.109 117.582 115.668 1.00 32.01 N
ATOM 23 C4 A A2013 41.042 118.533 115.482 1.00 31.91 C
ATOM 24 P G A2014 45.985 115.734 117.014 1.00 26.19 P
ATOM 25 OP1 G A2014 46.842 114.796 117.752 1.00 24.45 O
ATOM 26 OP2 G A2014 46.582 116.585 115.937 1.00 24.09 O
ATOM 27 O5' G A2014 44.778 114.915 116.379 1.00 23.73 O
TER
ATOM 1 O3' A B2013 45.266 116.639 118.113 1.00 26.11 O
ATOM 2 P G B2014 45.985 115.734 117.014 1.00 26.19 P
ATOM 3 OP1 G B2014 46.842 114.796 117.752 1.00 24.45 O
ATOM 4 OP2 G B2014 46.582 116.585 115.937 1.00 24.09 O
ATOM 5 O5' G B2014 44.778 114.915 116.379 1.00 23.73 O
ATOM 6 C5' G B2014 44.079 113.913 117.135 1.00 22.05 C
ATOM 7 C4' G B2014 42.880 113.407 116.357 1.00 21.72 C
ATOM 8 O4' G B2014 42.018 114.532 116.045 1.00 21.26 O
ATOM 9 C3' G B2014 43.156 112.783 114.991 1.00 21.38 C
ATOM 10 O3' G B2014 43.514 111.405 115.078 1.00 23.62 O
ATOM 11 C2' G B2014 41.813 112.933 114.296 1.00 20.84 C
ATOM 12 O2' G B2014 40.895 111.954 114.723 1.00 19.36 O
ATOM 13 C1' G B2014 41.369 114.307 114.799 1.00 22.36 C
ATOM 14 N9 G B2014 41.798 115.328 113.852 1.00 23.26 N
ATOM 15 C8 G B2014 42.844 116.204 113.968 1.00 23.87 C
ATOM 16 N7 G B2014 43.016 116.933 112.903 1.00 24.48 N
ATOM 17 C5 G B2014 42.015 116.518 112.040 1.00 25.02 C
ATOM 18 C6 G B2014 41.703 116.941 110.721 1.00 24.70 C
ATOM 19 O6 G B2014 42.287 117.764 110.023 1.00 25.63 O
ATOM 20 N1 G B2014 40.588 116.288 110.221 1.00 23.50 N
ATOM 21 C2 G B2014 39.867 115.337 110.891 1.00 26.39 C
ATOM 22 N2 G B2014 38.807 114.827 110.242 1.00 26.57 N
ATOM 23 N3 G B2014 40.161 114.916 112.115 1.00 26.30 N
ATOM 24 C4 G B2014 41.241 115.550 112.623 1.00 24.76 C
ATOM 25 P U B2015 44.520 110.769 113.997 1.00 26.95 P
ATOM 26 OP1 U B2015 44.892 109.403 114.432 1.00 26.18 O
ATOM 27 OP2 U B2015 45.590 111.770 113.728 1.00 27.06 O
ATOM 28 O5' U B2015 43.642 110.638 112.676 1.00 25.77 O
TER
ATOM 2 P A A2013 46.298 122.064 119.165 1.00 27.37 P
ATOM 3 OP1 A A2013 47.208 121.946 120.315 1.00 25.70 O
ATOM 4 OP2 A A2013 46.847 122.139 117.795 1.00 29.39 O
ATOM 5 O5' A A2013 45.259 120.874 119.235 1.00 25.67 O
ATOM 6 C5' A A2013 45.417 119.742 118.395 1.00 28.73 C
ATOM 7 C4' A A2013 44.311 118.768 118.648 1.00 29.33 C
ATOM 8 O4' A A2013 43.032 119.402 118.403 1.00 29.32 O
ATOM 9 C3' A A2013 44.325 117.598 117.700 1.00 28.39 C
ATOM 10 O3' A A2013 45.266 116.639 118.113 1.00 26.11 O
ATOM 11 C2' A A2013 42.879 117.141 117.751 1.00 29.23 C
ATOM 12 O2' A A2013 42.545 116.463 118.943 1.00 30.71 O
ATOM 13 C1' A A2013 42.167 118.490 117.749 1.00 30.04 C
ATOM 14 N9 A A2013 41.988 118.961 116.381 1.00 31.92 N
ATOM 15 C8 A A2013 42.723 119.914 115.727 1.00 33.01 C
ATOM 16 N7 A A2013 42.319 120.141 114.502 1.00 32.96 N
ATOM 17 C5 A A2013 41.243 119.282 114.342 1.00 31.40 C
ATOM 18 C6 A A2013 40.374 119.060 113.280 1.00 30.87 C
ATOM 19 N6 A A2013 40.433 119.729 112.131 1.00 30.02 N
ATOM 20 N1 A A2013 39.421 118.116 113.436 1.00 30.42 N
ATOM 21 C2 A A2013 39.358 117.451 114.585 1.00 29.92 C
ATOM 22 N3 A A2013 40.109 117.582 115.668 1.00 32.01 N
ATOM 23 C4 A A2013 41.042 118.533 115.482 1.00 31.91 C
ATOM 24 P G A2014 45.985 115.734 117.014 1.00 26.19 P
ATOM 25 OP1 G A2014 46.842 114.796 117.752 1.00 24.45 O
ATOM 26 OP2 G A2014 46.582 116.585 115.937 1.00 24.09 O
ATOM 27 O5' G A2014 44.778 114.915 116.379 1.00 23.73 O
TER
ATOM 1 O3' A B2013 45.266 116.639 118.113 1.00 26.11 O
ATOM 2 P G B2014 45.985 115.734 117.014 1.00 26.19 P
ATOM 3 OP1 G B2014 46.842 114.796 117.752 1.00 24.45 O
ATOM 4 OP2 G B2014 46.582 116.585 115.937 1.00 24.09 O
ATOM 5 O5' G B2014 44.778 114.915 116.379 1.00 23.73 O
ATOM 6 C5' G B2014 44.079 113.913 117.135 1.00 22.05 C
ATOM 7 C4' G B2014 42.880 113.407 116.357 1.00 21.72 C
ATOM 8 O4' G B2014 42.018 114.532 116.045 1.00 21.26 O
ATOM 9 C3' G B2014 43.156 112.783 114.991 1.00 21.38 C
ATOM 10 O3' G B2014 43.514 111.405 115.078 1.00 23.62 O
ATOM 11 C2' G B2014 41.813 112.933 114.296 1.00 20.84 C
ATOM 12 O2' G B2014 40.895 111.954 114.723 1.00 19.36 O
ATOM 13 C1' G B2014 41.369 114.307 114.799 1.00 22.36 C
ATOM 14 N9 G B2014 41.798 115.328 113.852 1.00 23.26 N
ATOM 15 C8 G B2014 42.844 116.204 113.968 1.00 23.87 C
ATOM 16 N7 G B2014 43.016 116.933 112.903 1.00 24.48 N
ATOM 17 C5 G B2014 42.015 116.518 112.040 1.00 25.02 C
ATOM 18 C6 G B2014 41.703 116.941 110.721 1.00 24.70 C
ATOM 19 O6 G B2014 42.287 117.764 110.023 1.00 25.63 O
ATOM 20 N1 G B2014 40.588 116.288 110.221 1.00 23.50 N
ATOM 21 C2 G B2014 39.867 115.337 110.891 1.00 26.39 C
ATOM 22 N2 G B2014 38.807 114.827 110.242 1.00 26.57 N
ATOM 23 N3 G B2014 40.161 114.916 112.115 1.00 26.30 N
ATOM 24 C4 G B2014 41.241 115.550 112.623 1.00 24.76 C
ATOM 25 P U B2015 44.520 110.769 113.997 1.00 26.95 P
ATOM 26 OP1 U B2015 44.892 109.403 114.432 1.00 26.18 O
ATOM 27 OP2 U B2015 45.590 111.770 113.728 1.00 27.06 O
ATOM 28 O5' U B2015 43.642 110.638 112.676 1.00 25.77 O
TER
Atoms:
OP1: (47.208,121.946,120.315)
OP2: (46.847,122.139,117.795)
C3': (44.325,117.598,117.700)
C1': (42.167,118.490,117.749)
C5': (45.417,119.742,118.395)
O4': (43.032,119.402,118.403)
C8: (42.723,119.914,115.727)
O2': (42.545,116.463,118.943)
C6: (40.374,119.060,113.280)
C5: (41.243,119.282,114.342)
C4: (41.042,118.533,115.482)
P: (46.298,122.064,119.165)
C4': (44.311,118.768,118.648)
C2': (42.879,117.141,117.751)
C2: (39.358,117.451,114.585)
N1: (39.421,118.116,113.436)
N3: (40.109,117.582,115.668)
N6: (40.433,119.729,112.131)
N7: (42.319,120.141,114.502)
N9: (41.988,118.961,116.381)
O5': (45.259,120.874,119.235)
O3': (45.266,116.639,118.113)
OP2: (46.847,122.139,117.795)
C3': (44.325,117.598,117.700)
C1': (42.167,118.490,117.749)
C5': (45.417,119.742,118.395)
O4': (43.032,119.402,118.403)
C8: (42.723,119.914,115.727)
O2': (42.545,116.463,118.943)
C6: (40.374,119.060,113.280)
C5: (41.243,119.282,114.342)
C4: (41.042,118.533,115.482)
P: (46.298,122.064,119.165)
C4': (44.311,118.768,118.648)
C2': (42.879,117.141,117.751)
C2: (39.358,117.451,114.585)
N1: (39.421,118.116,113.436)
N3: (40.109,117.582,115.668)
N6: (40.433,119.729,112.131)
N7: (42.319,120.141,114.502)
N9: (41.988,118.961,116.381)
O5': (45.259,120.874,119.235)
O3': (45.266,116.639,118.113)
OP1: (46.842,114.796,117.752)
OP2: (46.582,116.585,115.937)
C3': (43.156,112.783,114.991)
C1': (41.369,114.307,114.799)
C5': (44.079,113.913,117.135)
O6: (42.287,117.764,110.023)
O4': (42.018,114.532,116.045)
C8: (42.844,116.204,113.968)
C2: (39.867,115.337,110.891)
C6: (41.703,116.941,110.721)
C5: (42.015,116.518,112.040)
C4: (41.241,115.550,112.623)
P: (45.985,115.734,117.014)
C4': (42.880,113.407,116.357)
C2': (41.813,112.933,114.296)
O2': (40.895,111.954,114.723)
N1: (40.588,116.288,110.221)
N2: (38.807,114.827,110.242)
N3: (40.161,114.916,112.115)
N7: (43.016,116.933,112.903)
N9: (41.798,115.328,113.852)
O5': (44.778,114.915,116.379)
O3': (43.514,111.405,115.078)
OP2: (46.582,116.585,115.937)
C3': (43.156,112.783,114.991)
C1': (41.369,114.307,114.799)
C5': (44.079,113.913,117.135)
O6: (42.287,117.764,110.023)
O4': (42.018,114.532,116.045)
C8: (42.844,116.204,113.968)
C2: (39.867,115.337,110.891)
C6: (41.703,116.941,110.721)
C5: (42.015,116.518,112.040)
C4: (41.241,115.550,112.623)
P: (45.985,115.734,117.014)
C4': (42.880,113.407,116.357)
C2': (41.813,112.933,114.296)
O2': (40.895,111.954,114.723)
N1: (40.588,116.288,110.221)
N2: (38.807,114.827,110.242)
N3: (40.161,114.916,112.115)
N7: (43.016,116.933,112.903)
N9: (41.798,115.328,113.852)
O5': (44.778,114.915,116.379)
O3': (43.514,111.405,115.078)
Image (generated by PyMOL):