ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0309:0310

Extra

PDB:
ATOM 1 O3' G A 308 0.933 130.933 45.974 1.00 66.36 O
ATOM 2 P A A 309 0.446 130.120 44.676 1.00 67.59 P
ATOM 3 OP1 A A 309 -0.017 128.796 45.163 1.00 67.82 O
ATOM 4 OP2 A A 309 1.514 130.179 43.643 1.00 67.63 O
ATOM 5 O5' A A 309 -0.799 130.971 44.151 1.00 66.33 O
ATOM 6 C5' A A 309 -2.052 130.950 44.851 1.00 68.09 C
ATOM 7 C4' A A 309 -3.052 131.881 44.198 1.00 70.05 C
ATOM 8 O4' A A 309 -2.635 133.263 44.377 1.00 70.23 O
ATOM 9 C3' A A 309 -3.253 131.758 42.696 1.00 70.74 C
ATOM 10 O3' A A 309 -4.098 130.701 42.288 1.00 70.75 O
ATOM 11 C2' A A 309 -3.846 133.112 42.334 1.00 70.78 C
ATOM 12 O2' A A 309 -5.232 133.200 42.588 1.00 70.95 O
ATOM 13 C1' A A 309 -3.076 134.042 43.271 1.00 71.57 C
ATOM 14 N9 A A 309 -1.912 134.579 42.561 1.00 71.67 N
ATOM 15 C8 A A 309 -0.631 134.084 42.512 1.00 70.78 C
ATOM 16 N7 A A 309 0.161 134.750 41.708 1.00 70.39 N
ATOM 17 C5 A A 309 -0.644 135.762 41.206 1.00 70.14 C
ATOM 18 C6 A A 309 -0.401 136.798 40.287 1.00 69.25 C
ATOM 19 N6 A A 309 0.768 136.987 39.681 1.00 67.14 N
ATOM 20 N1 A A 309 -1.419 137.639 40.005 1.00 69.51 N
ATOM 21 C2 A A 309 -2.597 137.443 40.607 1.00 70.56 C
ATOM 22 N3 A A 309 -2.951 136.504 41.481 1.00 71.11 N
ATOM 23 C4 A A 309 -1.917 135.684 41.740 1.00 71.04 C
ATOM 24 P G A 310 -3.929 130.095 40.808 1.00 74.65 P
ATOM 25 OP1 G A 310 -4.975 129.052 40.647 1.00 75.71 O
ATOM 26 OP2 G A 310 -2.503 129.739 40.598 1.00 73.80 O
ATOM 27 O5' G A 310 -4.286 131.311 39.842 1.00 72.60 O
TER

ATOM 1 O3' A B 309 -4.098 130.701 42.288 1.00 70.75 O
ATOM 2 P G B 310 -3.929 130.095 40.808 1.00 74.65 P
ATOM 3 OP1 G B 310 -4.975 129.052 40.647 1.00 75.71 O
ATOM 4 OP2 G B 310 -2.503 129.739 40.598 1.00 73.80 O
ATOM 5 O5' G B 310 -4.286 131.311 39.842 1.00 72.60 O
ATOM 6 C5' G B 310 -5.615 131.845 39.825 1.00 74.82 C
ATOM 7 C4' G B 310 -5.752 132.940 38.794 1.00 76.36 C
ATOM 8 O4' G B 310 -4.954 134.096 39.162 1.00 77.58 O
ATOM 9 C3' G B 310 -5.312 132.644 37.372 1.00 77.01 C
ATOM 10 O3' G B 310 -6.240 131.884 36.623 1.00 76.20 O
ATOM 11 C2' G B 310 -5.149 134.040 36.792 1.00 77.15 C
ATOM 12 O2' G B 310 -6.382 134.607 36.394 1.00 76.98 O
ATOM 13 C1' G B 310 -4.590 134.808 37.989 1.00 77.84 C
ATOM 14 N9 G B 310 -3.134 134.901 37.900 1.00 78.58 N
ATOM 15 C8 G B 310 -2.194 134.087 38.488 1.00 78.95 C
ATOM 16 N7 G B 310 -0.968 134.398 38.155 1.00 79.21 N
ATOM 17 C5 G B 310 -1.108 135.491 37.308 1.00 79.39 C
ATOM 18 C6 G B 310 -0.127 136.263 36.621 1.00 79.89 C
ATOM 19 O6 G B 310 1.103 136.125 36.618 1.00 80.26 O
ATOM 20 N1 G B 310 -0.710 137.280 35.873 1.00 80.33 N
ATOM 21 C2 G B 310 -2.057 137.526 35.790 1.00 80.04 C
ATOM 22 N2 G B 310 -2.425 138.552 35.014 1.00 79.69 N
ATOM 23 N3 G B 310 -2.977 136.819 36.421 1.00 79.68 N
ATOM 24 C4 G B 310 -2.436 135.823 37.155 1.00 79.03 C
ATOM 25 P C B 311 -5.701 130.954 35.430 1.00 77.05 P
ATOM 26 OP1 C B 311 -6.859 130.175 34.914 1.00 77.20 O
ATOM 27 OP2 C B 311 -4.497 130.241 35.920 1.00 76.43 O
ATOM 28 O5' C B 311 -5.220 131.990 34.313 1.00 77.56 O
TER

Atoms:
OP1: (-0.017,128.796,45.163)
OP2: (1.514,130.179,43.643)
C3': (-3.253,131.758,42.696)
C1': (-3.076,134.042,43.271)
C5': (-2.052,130.950,44.851)
O4': (-2.635,133.263,44.377)
C8: (-0.631,134.084,42.512)
O2': (-5.232,133.200,42.588)
C6: (-0.401,136.798,40.287)
C5: (-0.644,135.762,41.206)
C4: (-1.917,135.684,41.740)
P: (0.446,130.120,44.676)
C4': (-3.052,131.881,44.198)
C2': (-3.846,133.112,42.334)
C2: (-2.597,137.443,40.607)
N1: (-1.419,137.639,40.005)
N3: (-2.951,136.504,41.481)
N6: (0.768,136.987,39.681)
N7: (0.161,134.750,41.708)
N9: (-1.912,134.579,42.561)
O5': (-0.799,130.971,44.151)
O3': (-4.098,130.701,42.288)
OP1: (-4.975,129.052,40.647)
OP2: (-2.503,129.739,40.598)
C3': (-5.312,132.644,37.372)
C1': (-4.590,134.808,37.989)
C5': (-5.615,131.845,39.825)
O6: (1.103,136.125,36.618)
O4': (-4.954,134.096,39.162)
C8: (-2.194,134.087,38.488)
C2: (-2.057,137.526,35.790)
C6: (-0.127,136.263,36.621)
C5: (-1.108,135.491,37.308)
C4: (-2.436,135.823,37.155)
P: (-3.929,130.095,40.808)
C4': (-5.752,132.940,38.794)
C2': (-5.149,134.040,36.792)
O2': (-6.382,134.607,36.394)
N1: (-0.710,137.280,35.873)
N2: (-2.425,138.552,35.014)
N3: (-2.977,136.819,36.421)
N7: (-0.968,134.398,38.155)
N9: (-3.134,134.901,37.900)
O5': (-4.286,131.311,39.842)
O3': (-6.240,131.884,36.623)
Image (generated by PyMOL):
PyMOL image
show in jmol