Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2331:A2332
Extra
PDB:
ATOM 1 O3' G A2330 57.095 115.073 111.355 1.00 38.54 O
ATOM 2 P A A2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 3 OP1 A A2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 4 OP2 A A2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 5 O5' A A2331 56.571 112.652 111.427 1.00 39.45 O
ATOM 6 C5' A A2331 55.175 112.532 111.128 1.00 37.35 C
ATOM 7 C4' A A2331 54.918 111.288 110.356 1.00 36.23 C
ATOM 8 O4' A A2331 55.738 111.273 109.168 1.00 34.75 O
ATOM 9 C3' A A2331 55.341 110.051 111.094 1.00 36.19 C
ATOM 10 O3' A A2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 11 C2' A A2331 55.495 109.061 109.951 1.00 36.11 C
ATOM 12 O2' A A2331 54.235 108.668 109.429 1.00 37.71 O
ATOM 13 C1' A A2331 56.146 109.951 108.897 1.00 34.86 C
ATOM 14 N9 A A2331 57.607 109.910 108.889 1.00 35.68 N
ATOM 15 C8 A A2331 58.511 110.882 109.266 1.00 36.53 C
ATOM 16 N7 A A2331 59.763 110.548 109.064 1.00 36.35 N
ATOM 17 C5 A A2331 59.681 109.271 108.535 1.00 36.18 C
ATOM 18 C6 A A2331 60.662 108.378 108.079 1.00 36.72 C
ATOM 19 N6 A A2331 61.966 108.660 108.055 1.00 35.59 N
ATOM 20 N1 A A2331 60.252 107.178 107.624 1.00 36.83 N
ATOM 21 C2 A A2331 58.942 106.917 107.610 1.00 36.60 C
ATOM 22 N3 A A2331 57.925 107.681 107.988 1.00 35.78 N
ATOM 23 C4 A A2331 58.364 108.857 108.446 1.00 35.88 C
ATOM 24 P G A2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 25 OP1 G A2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 26 OP2 G A2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 27 O5' G A2332 55.086 107.477 112.855 1.00 39.42 O
TER
ATOM 1 O3' A B2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 2 P G B2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 3 OP1 G B2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 4 OP2 G B2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 5 O5' G B2332 55.086 107.477 112.855 1.00 39.42 O
ATOM 6 C5' G B2332 54.044 106.581 112.404 1.00 37.34 C
ATOM 7 C4' G B2332 54.618 105.269 111.932 1.00 37.95 C
ATOM 8 O4' G B2332 55.477 105.503 110.795 1.00 37.73 O
ATOM 9 C3' G B2332 55.510 104.535 112.913 1.00 38.99 C
ATOM 10 O3' G B2332 54.783 103.792 113.875 1.00 40.32 O
ATOM 11 C2' G B2332 56.338 103.651 112.000 1.00 39.16 C
ATOM 12 O2' G B2332 55.665 102.480 111.565 1.00 39.73 O
ATOM 13 C1' G B2332 56.577 104.605 110.834 1.00 39.25 C
ATOM 14 N9 G B2332 57.797 105.387 111.003 1.00 39.95 N
ATOM 15 C8 G B2332 57.898 106.690 111.428 1.00 39.68 C
ATOM 16 N7 G B2332 59.118 107.144 111.407 1.00 40.04 N
ATOM 17 C5 G B2332 59.870 106.066 110.969 1.00 40.13 C
ATOM 18 C6 G B2332 61.250 105.954 110.743 1.00 41.52 C
ATOM 19 O6 G B2332 62.127 106.819 110.872 1.00 43.41 O
ATOM 20 N1 G B2332 61.588 104.679 110.312 1.00 40.75 N
ATOM 21 C2 G B2332 60.710 103.646 110.121 1.00 39.76 C
ATOM 22 N2 G B2332 61.244 102.474 109.719 1.00 40.21 N
ATOM 23 N3 G B2332 59.418 103.743 110.314 1.00 38.64 N
ATOM 24 C4 G B2332 59.068 104.970 110.735 1.00 39.11 C
ATOM 25 P U B2333 55.291 103.762 115.402 1.00 41.29 P
ATOM 26 OP1 U B2333 54.243 103.010 116.132 1.00 38.66 O
ATOM 27 OP2 U B2333 55.648 105.129 115.836 1.00 40.16 O
ATOM 28 O5' U B2333 56.647 102.923 115.360 1.00 39.08 O
TER
ATOM 2 P A A2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 3 OP1 A A2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 4 OP2 A A2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 5 O5' A A2331 56.571 112.652 111.427 1.00 39.45 O
ATOM 6 C5' A A2331 55.175 112.532 111.128 1.00 37.35 C
ATOM 7 C4' A A2331 54.918 111.288 110.356 1.00 36.23 C
ATOM 8 O4' A A2331 55.738 111.273 109.168 1.00 34.75 O
ATOM 9 C3' A A2331 55.341 110.051 111.094 1.00 36.19 C
ATOM 10 O3' A A2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 11 C2' A A2331 55.495 109.061 109.951 1.00 36.11 C
ATOM 12 O2' A A2331 54.235 108.668 109.429 1.00 37.71 O
ATOM 13 C1' A A2331 56.146 109.951 108.897 1.00 34.86 C
ATOM 14 N9 A A2331 57.607 109.910 108.889 1.00 35.68 N
ATOM 15 C8 A A2331 58.511 110.882 109.266 1.00 36.53 C
ATOM 16 N7 A A2331 59.763 110.548 109.064 1.00 36.35 N
ATOM 17 C5 A A2331 59.681 109.271 108.535 1.00 36.18 C
ATOM 18 C6 A A2331 60.662 108.378 108.079 1.00 36.72 C
ATOM 19 N6 A A2331 61.966 108.660 108.055 1.00 35.59 N
ATOM 20 N1 A A2331 60.252 107.178 107.624 1.00 36.83 N
ATOM 21 C2 A A2331 58.942 106.917 107.610 1.00 36.60 C
ATOM 22 N3 A A2331 57.925 107.681 107.988 1.00 35.78 N
ATOM 23 C4 A A2331 58.364 108.857 108.446 1.00 35.88 C
ATOM 24 P G A2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 25 OP1 G A2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 26 OP2 G A2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 27 O5' G A2332 55.086 107.477 112.855 1.00 39.42 O
TER
ATOM 1 O3' A B2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 2 P G B2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 3 OP1 G B2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 4 OP2 G B2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 5 O5' G B2332 55.086 107.477 112.855 1.00 39.42 O
ATOM 6 C5' G B2332 54.044 106.581 112.404 1.00 37.34 C
ATOM 7 C4' G B2332 54.618 105.269 111.932 1.00 37.95 C
ATOM 8 O4' G B2332 55.477 105.503 110.795 1.00 37.73 O
ATOM 9 C3' G B2332 55.510 104.535 112.913 1.00 38.99 C
ATOM 10 O3' G B2332 54.783 103.792 113.875 1.00 40.32 O
ATOM 11 C2' G B2332 56.338 103.651 112.000 1.00 39.16 C
ATOM 12 O2' G B2332 55.665 102.480 111.565 1.00 39.73 O
ATOM 13 C1' G B2332 56.577 104.605 110.834 1.00 39.25 C
ATOM 14 N9 G B2332 57.797 105.387 111.003 1.00 39.95 N
ATOM 15 C8 G B2332 57.898 106.690 111.428 1.00 39.68 C
ATOM 16 N7 G B2332 59.118 107.144 111.407 1.00 40.04 N
ATOM 17 C5 G B2332 59.870 106.066 110.969 1.00 40.13 C
ATOM 18 C6 G B2332 61.250 105.954 110.743 1.00 41.52 C
ATOM 19 O6 G B2332 62.127 106.819 110.872 1.00 43.41 O
ATOM 20 N1 G B2332 61.588 104.679 110.312 1.00 40.75 N
ATOM 21 C2 G B2332 60.710 103.646 110.121 1.00 39.76 C
ATOM 22 N2 G B2332 61.244 102.474 109.719 1.00 40.21 N
ATOM 23 N3 G B2332 59.418 103.743 110.314 1.00 38.64 N
ATOM 24 C4 G B2332 59.068 104.970 110.735 1.00 39.11 C
ATOM 25 P U B2333 55.291 103.762 115.402 1.00 41.29 P
ATOM 26 OP1 U B2333 54.243 103.010 116.132 1.00 38.66 O
ATOM 27 OP2 U B2333 55.648 105.129 115.836 1.00 40.16 O
ATOM 28 O5' U B2333 56.647 102.923 115.360 1.00 39.08 O
TER
Atoms:
OP1: (56.016,114.011,113.412)
OP2: (58.459,113.536,112.772)
C3': (55.341,110.051,111.094)
C1': (56.146,109.951,108.897)
C5': (55.175,112.532,111.128)
O4': (55.738,111.273,109.168)
C8: (58.511,110.882,109.266)
O2': (54.235,108.668,109.429)
C6: (60.662,108.378,108.079)
C5: (59.681,109.271,108.535)
C4: (58.364,108.857,108.446)
P: (57.068,113.829,112.366)
C4': (54.918,111.288,110.356)
C2': (55.495,109.061,109.951)
C2: (58.942,106.917,107.610)
N1: (60.252,107.178,107.624)
N3: (57.925,107.681,107.988)
N6: (61.966,108.660,108.055)
N7: (59.763,110.548,109.064)
N9: (57.607,109.910,108.889)
O5': (56.571,112.652,111.427)
O3': (54.333,109.731,112.040)
OP2: (58.459,113.536,112.772)
C3': (55.341,110.051,111.094)
C1': (56.146,109.951,108.897)
C5': (55.175,112.532,111.128)
O4': (55.738,111.273,109.168)
C8: (58.511,110.882,109.266)
O2': (54.235,108.668,109.429)
C6: (60.662,108.378,108.079)
C5: (59.681,109.271,108.535)
C4: (58.364,108.857,108.446)
P: (57.068,113.829,112.366)
C4': (54.918,111.288,110.356)
C2': (55.495,109.061,109.951)
C2: (58.942,106.917,107.610)
N1: (60.252,107.178,107.624)
N3: (57.925,107.681,107.988)
N6: (61.966,108.660,108.055)
N7: (59.763,110.548,109.064)
N9: (57.607,109.910,108.889)
O5': (56.571,112.652,111.427)
O3': (54.333,109.731,112.040)
OP1: (53.498,108.874,114.223)
OP2: (55.943,109.609,113.904)
C3': (55.510,104.535,112.913)
C1': (56.577,104.605,110.834)
C5': (54.044,106.581,112.404)
O6: (62.127,106.819,110.872)
O4': (55.477,105.503,110.795)
C8: (57.898,106.690,111.428)
C2: (60.710,103.646,110.121)
C6: (61.250,105.954,110.743)
C5: (59.870,106.066,110.969)
C4: (59.068,104.970,110.735)
P: (54.727,108.946,113.377)
C4': (54.618,105.269,111.932)
C2': (56.338,103.651,112.000)
O2': (55.665,102.480,111.565)
N1: (61.588,104.679,110.312)
N2: (61.244,102.474,109.719)
N3: (59.418,103.743,110.314)
N7: (59.118,107.144,111.407)
N9: (57.797,105.387,111.003)
O5': (55.086,107.477,112.855)
O3': (54.783,103.792,113.875)
OP2: (55.943,109.609,113.904)
C3': (55.510,104.535,112.913)
C1': (56.577,104.605,110.834)
C5': (54.044,106.581,112.404)
O6: (62.127,106.819,110.872)
O4': (55.477,105.503,110.795)
C8: (57.898,106.690,111.428)
C2: (60.710,103.646,110.121)
C6: (61.250,105.954,110.743)
C5: (59.870,106.066,110.969)
C4: (59.068,104.970,110.735)
P: (54.727,108.946,113.377)
C4': (54.618,105.269,111.932)
C2': (56.338,103.651,112.000)
O2': (55.665,102.480,111.565)
N1: (61.588,104.679,110.312)
N2: (61.244,102.474,109.719)
N3: (59.418,103.743,110.314)
N7: (59.118,107.144,111.407)
N9: (57.797,105.387,111.003)
O5': (55.086,107.477,112.855)
O3': (54.783,103.792,113.875)
Image (generated by PyMOL):