Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0435:0436
Extra
PDB:
ATOM 1 O3' G A 434 35.094 127.728 32.845 1.00 35.96 O
ATOM 2 P A A 435 34.363 127.921 34.267 1.00 36.89 P
ATOM 3 OP1 A A 435 32.917 128.015 33.946 1.00 37.07 O
ATOM 4 OP2 A A 435 34.997 129.001 35.058 1.00 33.96 O
ATOM 5 O5' A A 435 34.655 126.552 35.032 1.00 37.17 O
ATOM 6 C5' A A 435 34.258 125.286 34.480 1.00 36.65 C
ATOM 7 C4' A A 435 34.861 124.148 35.278 1.00 37.19 C
ATOM 8 O4' A A 435 36.305 124.198 35.195 1.00 37.13 O
ATOM 9 C3' A A 435 34.570 124.126 36.769 1.00 37.32 C
ATOM 10 O3' A A 435 33.311 123.512 37.020 1.00 38.39 O
ATOM 11 C2' A A 435 35.714 123.280 37.300 1.00 37.73 C
ATOM 12 O2' A A 435 35.507 121.903 37.087 1.00 39.10 O
ATOM 13 C1' A A 435 36.869 123.743 36.410 1.00 37.64 C
ATOM 14 N9 A A 435 37.633 124.846 37.001 1.00 39.49 N
ATOM 15 C8 A A 435 37.579 126.176 36.668 1.00 37.97 C
ATOM 16 N7 A A 435 38.367 126.933 37.386 1.00 38.59 N
ATOM 17 C5 A A 435 38.990 126.043 38.250 1.00 38.16 C
ATOM 18 C6 A A 435 39.944 126.222 39.264 1.00 37.26 C
ATOM 19 N6 A A 435 40.470 127.402 39.589 1.00 35.69 N
ATOM 20 N1 A A 435 40.348 125.130 39.940 1.00 38.09 N
ATOM 21 C2 A A 435 39.834 123.942 39.607 1.00 37.81 C
ATOM 22 N3 A A 435 38.943 123.644 38.674 1.00 37.29 N
ATOM 23 C4 A A 435 38.552 124.753 38.023 1.00 38.61 C
ATOM 24 P G A 436 32.486 123.885 38.343 1.00 37.45 P
ATOM 25 OP1 G A 436 31.097 123.394 38.143 1.00 37.35 O
ATOM 26 OP2 G A 436 32.709 125.317 38.645 1.00 35.31 O
ATOM 27 O5' G A 436 33.179 122.997 39.477 1.00 38.92 O
TER
ATOM 1 O3' A B 435 33.311 123.512 37.020 1.00 38.39 O
ATOM 2 P G B 436 32.486 123.885 38.343 1.00 37.45 P
ATOM 3 OP1 G B 436 31.097 123.394 38.143 1.00 37.35 O
ATOM 4 OP2 G B 436 32.709 125.317 38.645 1.00 35.31 O
ATOM 5 O5' G B 436 33.179 122.997 39.477 1.00 38.92 O
ATOM 6 C5' G B 436 33.484 121.593 39.262 1.00 37.55 C
ATOM 7 C4' G B 436 34.241 121.021 40.453 1.00 37.40 C
ATOM 8 O4' G B 436 35.502 121.728 40.598 1.00 38.36 O
ATOM 9 C3' G B 436 33.549 121.127 41.811 1.00 34.78 C
ATOM 10 O3' G B 436 34.010 120.082 42.675 1.00 32.67 O
ATOM 11 C2' G B 436 34.099 122.442 42.342 1.00 34.42 C
ATOM 12 O2' G B 436 34.055 122.529 43.750 1.00 34.85 O
ATOM 13 C1' G B 436 35.546 122.366 41.859 1.00 36.98 C
ATOM 14 N9 G B 436 36.177 123.672 41.699 1.00 39.40 N
ATOM 15 C8 G B 436 35.798 124.675 40.837 1.00 40.28 C
ATOM 16 N7 G B 436 36.526 125.750 40.949 1.00 41.45 N
ATOM 17 C5 G B 436 37.452 125.438 41.937 1.00 41.36 C
ATOM 18 C6 G B 436 38.496 126.224 42.504 1.00 40.14 C
ATOM 19 O6 G B 436 38.828 127.383 42.228 1.00 35.88 O
ATOM 20 N1 G B 436 39.181 125.523 43.489 1.00 41.28 N
ATOM 21 C2 G B 436 38.907 124.233 43.877 1.00 41.50 C
ATOM 22 N2 G B 436 39.676 123.736 44.854 1.00 39.99 N
ATOM 23 N3 G B 436 37.947 123.489 43.351 1.00 41.28 N
ATOM 24 C4 G B 436 37.259 124.152 42.399 1.00 40.16 C
ATOM 25 P A B 437 33.358 118.617 42.597 1.00 29.97 P
ATOM 26 OP1 A B 437 34.491 117.661 42.491 1.00 28.15 O
ATOM 27 OP2 A B 437 32.307 118.633 41.550 1.00 30.85 O
ATOM 28 O5' A B 437 32.665 118.410 44.016 1.00 29.14 O
TER
ATOM 2 P A A 435 34.363 127.921 34.267 1.00 36.89 P
ATOM 3 OP1 A A 435 32.917 128.015 33.946 1.00 37.07 O
ATOM 4 OP2 A A 435 34.997 129.001 35.058 1.00 33.96 O
ATOM 5 O5' A A 435 34.655 126.552 35.032 1.00 37.17 O
ATOM 6 C5' A A 435 34.258 125.286 34.480 1.00 36.65 C
ATOM 7 C4' A A 435 34.861 124.148 35.278 1.00 37.19 C
ATOM 8 O4' A A 435 36.305 124.198 35.195 1.00 37.13 O
ATOM 9 C3' A A 435 34.570 124.126 36.769 1.00 37.32 C
ATOM 10 O3' A A 435 33.311 123.512 37.020 1.00 38.39 O
ATOM 11 C2' A A 435 35.714 123.280 37.300 1.00 37.73 C
ATOM 12 O2' A A 435 35.507 121.903 37.087 1.00 39.10 O
ATOM 13 C1' A A 435 36.869 123.743 36.410 1.00 37.64 C
ATOM 14 N9 A A 435 37.633 124.846 37.001 1.00 39.49 N
ATOM 15 C8 A A 435 37.579 126.176 36.668 1.00 37.97 C
ATOM 16 N7 A A 435 38.367 126.933 37.386 1.00 38.59 N
ATOM 17 C5 A A 435 38.990 126.043 38.250 1.00 38.16 C
ATOM 18 C6 A A 435 39.944 126.222 39.264 1.00 37.26 C
ATOM 19 N6 A A 435 40.470 127.402 39.589 1.00 35.69 N
ATOM 20 N1 A A 435 40.348 125.130 39.940 1.00 38.09 N
ATOM 21 C2 A A 435 39.834 123.942 39.607 1.00 37.81 C
ATOM 22 N3 A A 435 38.943 123.644 38.674 1.00 37.29 N
ATOM 23 C4 A A 435 38.552 124.753 38.023 1.00 38.61 C
ATOM 24 P G A 436 32.486 123.885 38.343 1.00 37.45 P
ATOM 25 OP1 G A 436 31.097 123.394 38.143 1.00 37.35 O
ATOM 26 OP2 G A 436 32.709 125.317 38.645 1.00 35.31 O
ATOM 27 O5' G A 436 33.179 122.997 39.477 1.00 38.92 O
TER
ATOM 1 O3' A B 435 33.311 123.512 37.020 1.00 38.39 O
ATOM 2 P G B 436 32.486 123.885 38.343 1.00 37.45 P
ATOM 3 OP1 G B 436 31.097 123.394 38.143 1.00 37.35 O
ATOM 4 OP2 G B 436 32.709 125.317 38.645 1.00 35.31 O
ATOM 5 O5' G B 436 33.179 122.997 39.477 1.00 38.92 O
ATOM 6 C5' G B 436 33.484 121.593 39.262 1.00 37.55 C
ATOM 7 C4' G B 436 34.241 121.021 40.453 1.00 37.40 C
ATOM 8 O4' G B 436 35.502 121.728 40.598 1.00 38.36 O
ATOM 9 C3' G B 436 33.549 121.127 41.811 1.00 34.78 C
ATOM 10 O3' G B 436 34.010 120.082 42.675 1.00 32.67 O
ATOM 11 C2' G B 436 34.099 122.442 42.342 1.00 34.42 C
ATOM 12 O2' G B 436 34.055 122.529 43.750 1.00 34.85 O
ATOM 13 C1' G B 436 35.546 122.366 41.859 1.00 36.98 C
ATOM 14 N9 G B 436 36.177 123.672 41.699 1.00 39.40 N
ATOM 15 C8 G B 436 35.798 124.675 40.837 1.00 40.28 C
ATOM 16 N7 G B 436 36.526 125.750 40.949 1.00 41.45 N
ATOM 17 C5 G B 436 37.452 125.438 41.937 1.00 41.36 C
ATOM 18 C6 G B 436 38.496 126.224 42.504 1.00 40.14 C
ATOM 19 O6 G B 436 38.828 127.383 42.228 1.00 35.88 O
ATOM 20 N1 G B 436 39.181 125.523 43.489 1.00 41.28 N
ATOM 21 C2 G B 436 38.907 124.233 43.877 1.00 41.50 C
ATOM 22 N2 G B 436 39.676 123.736 44.854 1.00 39.99 N
ATOM 23 N3 G B 436 37.947 123.489 43.351 1.00 41.28 N
ATOM 24 C4 G B 436 37.259 124.152 42.399 1.00 40.16 C
ATOM 25 P A B 437 33.358 118.617 42.597 1.00 29.97 P
ATOM 26 OP1 A B 437 34.491 117.661 42.491 1.00 28.15 O
ATOM 27 OP2 A B 437 32.307 118.633 41.550 1.00 30.85 O
ATOM 28 O5' A B 437 32.665 118.410 44.016 1.00 29.14 O
TER
Atoms:
OP1: (32.917,128.015,33.946)
OP2: (34.997,129.001,35.058)
C3': (34.570,124.126,36.769)
C1': (36.869,123.743,36.410)
C5': (34.258,125.286,34.480)
O4': (36.305,124.198,35.195)
C8: (37.579,126.176,36.668)
O2': (35.507,121.903,37.087)
C6: (39.944,126.222,39.264)
C5: (38.990,126.043,38.250)
C4: (38.552,124.753,38.023)
P: (34.363,127.921,34.267)
C4': (34.861,124.148,35.278)
C2': (35.714,123.280,37.300)
C2: (39.834,123.942,39.607)
N1: (40.348,125.130,39.940)
N3: (38.943,123.644,38.674)
N6: (40.470,127.402,39.589)
N7: (38.367,126.933,37.386)
N9: (37.633,124.846,37.001)
O5': (34.655,126.552,35.032)
O3': (33.311,123.512,37.020)
OP2: (34.997,129.001,35.058)
C3': (34.570,124.126,36.769)
C1': (36.869,123.743,36.410)
C5': (34.258,125.286,34.480)
O4': (36.305,124.198,35.195)
C8: (37.579,126.176,36.668)
O2': (35.507,121.903,37.087)
C6: (39.944,126.222,39.264)
C5: (38.990,126.043,38.250)
C4: (38.552,124.753,38.023)
P: (34.363,127.921,34.267)
C4': (34.861,124.148,35.278)
C2': (35.714,123.280,37.300)
C2: (39.834,123.942,39.607)
N1: (40.348,125.130,39.940)
N3: (38.943,123.644,38.674)
N6: (40.470,127.402,39.589)
N7: (38.367,126.933,37.386)
N9: (37.633,124.846,37.001)
O5': (34.655,126.552,35.032)
O3': (33.311,123.512,37.020)
OP1: (31.097,123.394,38.143)
OP2: (32.709,125.317,38.645)
C3': (33.549,121.127,41.811)
C1': (35.546,122.366,41.859)
C5': (33.484,121.593,39.262)
O6: (38.828,127.383,42.228)
O4': (35.502,121.728,40.598)
C8: (35.798,124.675,40.837)
C2: (38.907,124.233,43.877)
C6: (38.496,126.224,42.504)
C5: (37.452,125.438,41.937)
C4: (37.259,124.152,42.399)
P: (32.486,123.885,38.343)
C4': (34.241,121.021,40.453)
C2': (34.099,122.442,42.342)
O2': (34.055,122.529,43.750)
N1: (39.181,125.523,43.489)
N2: (39.676,123.736,44.854)
N3: (37.947,123.489,43.351)
N7: (36.526,125.750,40.949)
N9: (36.177,123.672,41.699)
O5': (33.179,122.997,39.477)
O3': (34.010,120.082,42.675)
OP2: (32.709,125.317,38.645)
C3': (33.549,121.127,41.811)
C1': (35.546,122.366,41.859)
C5': (33.484,121.593,39.262)
O6: (38.828,127.383,42.228)
O4': (35.502,121.728,40.598)
C8: (35.798,124.675,40.837)
C2: (38.907,124.233,43.877)
C6: (38.496,126.224,42.504)
C5: (37.452,125.438,41.937)
C4: (37.259,124.152,42.399)
P: (32.486,123.885,38.343)
C4': (34.241,121.021,40.453)
C2': (34.099,122.442,42.342)
O2': (34.055,122.529,43.750)
N1: (39.181,125.523,43.489)
N2: (39.676,123.736,44.854)
N3: (37.947,123.489,43.351)
N7: (36.526,125.750,40.949)
N9: (36.177,123.672,41.699)
O5': (33.179,122.997,39.477)
O3': (34.010,120.082,42.675)
Image (generated by PyMOL):