Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2329:A2330
Extra
PDB:
ATOM 1 O3' C A2328 67.902 116.988 107.371 1.00 39.07 O
ATOM 2 P A A2329 67.034 116.205 108.453 1.00 40.24 P
ATOM 3 OP1 A A2329 67.665 116.450 109.764 1.00 40.01 O
ATOM 4 OP2 A A2329 66.863 114.816 107.964 1.00 40.18 O
ATOM 5 O5' A A2329 65.588 116.862 108.355 1.00 40.21 O
ATOM 6 C5' A A2329 65.318 118.210 108.742 1.00 40.86 C
ATOM 7 C4' A A2329 63.866 118.512 108.476 1.00 41.90 C
ATOM 8 O4' A A2329 63.648 118.549 107.046 1.00 42.96 O
ATOM 9 C3' A A2329 62.886 117.455 108.966 1.00 41.00 C
ATOM 10 O3' A A2329 62.596 117.623 110.349 1.00 40.16 O
ATOM 11 C2' A A2329 61.682 117.715 108.075 1.00 41.10 C
ATOM 12 O2' A A2329 60.976 118.853 108.484 1.00 40.44 O
ATOM 13 C1' A A2329 62.361 118.032 106.745 1.00 43.53 C
ATOM 14 N9 A A2329 62.510 116.836 105.914 1.00 46.59 N
ATOM 15 C8 A A2329 63.623 116.067 105.687 1.00 47.07 C
ATOM 16 N7 A A2329 63.400 115.034 104.918 1.00 48.54 N
ATOM 17 C5 A A2329 62.049 115.129 104.614 1.00 49.93 C
ATOM 18 C6 A A2329 61.189 114.319 103.847 1.00 51.44 C
ATOM 19 N6 A A2329 61.591 113.213 103.217 1.00 53.84 N
ATOM 20 N1 A A2329 59.894 114.691 103.749 1.00 50.89 N
ATOM 21 C2 A A2329 59.502 115.802 104.381 1.00 51.11 C
ATOM 22 N3 A A2329 60.213 116.643 105.131 1.00 51.07 N
ATOM 23 C4 A A2329 61.494 116.242 105.208 1.00 49.14 C
ATOM 24 P G A2330 62.172 116.360 111.247 1.00 41.96 P
ATOM 25 OP1 G A2330 61.903 116.878 112.618 1.00 40.22 O
ATOM 26 OP2 G A2330 63.181 115.290 111.067 1.00 41.03 O
ATOM 27 O5' G A2330 60.772 115.919 110.621 1.00 40.15 O
TER
ATOM 1 O3' A B2329 62.596 117.623 110.349 1.00 40.16 O
ATOM 2 P G B2330 62.172 116.360 111.247 1.00 41.96 P
ATOM 3 OP1 G B2330 61.903 116.878 112.618 1.00 40.22 O
ATOM 4 OP2 G B2330 63.181 115.290 111.067 1.00 41.03 O
ATOM 5 O5' G B2330 60.772 115.919 110.621 1.00 40.15 O
ATOM 6 C5' G B2330 59.674 116.841 110.616 1.00 39.72 C
ATOM 7 C4' G B2330 58.510 116.326 109.805 1.00 40.21 C
ATOM 8 O4' G B2330 58.899 116.136 108.421 1.00 42.44 O
ATOM 9 C3' G B2330 57.906 114.992 110.186 1.00 39.36 C
ATOM 10 O3' G B2330 57.095 115.073 111.355 1.00 38.54 O
ATOM 11 C2' G B2330 57.106 114.673 108.933 1.00 40.31 C
ATOM 12 O2' G B2330 55.962 115.505 108.894 1.00 38.43 O
ATOM 13 C1' G B2330 58.088 115.116 107.835 1.00 41.46 C
ATOM 14 N9 G B2330 58.970 114.061 107.328 1.00 41.77 N
ATOM 15 C8 G B2330 60.344 114.012 107.440 1.00 42.06 C
ATOM 16 N7 G B2330 60.863 112.937 106.919 1.00 42.57 N
ATOM 17 C5 G B2330 59.766 112.228 106.430 1.00 42.77 C
ATOM 18 C6 G B2330 59.695 110.957 105.773 1.00 42.69 C
ATOM 19 O6 G B2330 60.612 110.151 105.521 1.00 42.55 O
ATOM 20 N1 G B2330 58.388 110.647 105.420 1.00 42.27 N
ATOM 21 C2 G B2330 57.287 111.430 105.680 1.00 41.37 C
ATOM 22 N2 G B2330 56.111 110.969 105.222 1.00 42.67 N
ATOM 23 N3 G B2330 57.334 112.578 106.322 1.00 40.25 N
ATOM 24 C4 G B2330 58.593 112.920 106.659 1.00 41.49 C
ATOM 25 P A B2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 26 OP1 A B2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 27 OP2 A B2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 28 O5' A B2331 56.571 112.652 111.427 1.00 39.45 O
TER
ATOM 2 P A A2329 67.034 116.205 108.453 1.00 40.24 P
ATOM 3 OP1 A A2329 67.665 116.450 109.764 1.00 40.01 O
ATOM 4 OP2 A A2329 66.863 114.816 107.964 1.00 40.18 O
ATOM 5 O5' A A2329 65.588 116.862 108.355 1.00 40.21 O
ATOM 6 C5' A A2329 65.318 118.210 108.742 1.00 40.86 C
ATOM 7 C4' A A2329 63.866 118.512 108.476 1.00 41.90 C
ATOM 8 O4' A A2329 63.648 118.549 107.046 1.00 42.96 O
ATOM 9 C3' A A2329 62.886 117.455 108.966 1.00 41.00 C
ATOM 10 O3' A A2329 62.596 117.623 110.349 1.00 40.16 O
ATOM 11 C2' A A2329 61.682 117.715 108.075 1.00 41.10 C
ATOM 12 O2' A A2329 60.976 118.853 108.484 1.00 40.44 O
ATOM 13 C1' A A2329 62.361 118.032 106.745 1.00 43.53 C
ATOM 14 N9 A A2329 62.510 116.836 105.914 1.00 46.59 N
ATOM 15 C8 A A2329 63.623 116.067 105.687 1.00 47.07 C
ATOM 16 N7 A A2329 63.400 115.034 104.918 1.00 48.54 N
ATOM 17 C5 A A2329 62.049 115.129 104.614 1.00 49.93 C
ATOM 18 C6 A A2329 61.189 114.319 103.847 1.00 51.44 C
ATOM 19 N6 A A2329 61.591 113.213 103.217 1.00 53.84 N
ATOM 20 N1 A A2329 59.894 114.691 103.749 1.00 50.89 N
ATOM 21 C2 A A2329 59.502 115.802 104.381 1.00 51.11 C
ATOM 22 N3 A A2329 60.213 116.643 105.131 1.00 51.07 N
ATOM 23 C4 A A2329 61.494 116.242 105.208 1.00 49.14 C
ATOM 24 P G A2330 62.172 116.360 111.247 1.00 41.96 P
ATOM 25 OP1 G A2330 61.903 116.878 112.618 1.00 40.22 O
ATOM 26 OP2 G A2330 63.181 115.290 111.067 1.00 41.03 O
ATOM 27 O5' G A2330 60.772 115.919 110.621 1.00 40.15 O
TER
ATOM 1 O3' A B2329 62.596 117.623 110.349 1.00 40.16 O
ATOM 2 P G B2330 62.172 116.360 111.247 1.00 41.96 P
ATOM 3 OP1 G B2330 61.903 116.878 112.618 1.00 40.22 O
ATOM 4 OP2 G B2330 63.181 115.290 111.067 1.00 41.03 O
ATOM 5 O5' G B2330 60.772 115.919 110.621 1.00 40.15 O
ATOM 6 C5' G B2330 59.674 116.841 110.616 1.00 39.72 C
ATOM 7 C4' G B2330 58.510 116.326 109.805 1.00 40.21 C
ATOM 8 O4' G B2330 58.899 116.136 108.421 1.00 42.44 O
ATOM 9 C3' G B2330 57.906 114.992 110.186 1.00 39.36 C
ATOM 10 O3' G B2330 57.095 115.073 111.355 1.00 38.54 O
ATOM 11 C2' G B2330 57.106 114.673 108.933 1.00 40.31 C
ATOM 12 O2' G B2330 55.962 115.505 108.894 1.00 38.43 O
ATOM 13 C1' G B2330 58.088 115.116 107.835 1.00 41.46 C
ATOM 14 N9 G B2330 58.970 114.061 107.328 1.00 41.77 N
ATOM 15 C8 G B2330 60.344 114.012 107.440 1.00 42.06 C
ATOM 16 N7 G B2330 60.863 112.937 106.919 1.00 42.57 N
ATOM 17 C5 G B2330 59.766 112.228 106.430 1.00 42.77 C
ATOM 18 C6 G B2330 59.695 110.957 105.773 1.00 42.69 C
ATOM 19 O6 G B2330 60.612 110.151 105.521 1.00 42.55 O
ATOM 20 N1 G B2330 58.388 110.647 105.420 1.00 42.27 N
ATOM 21 C2 G B2330 57.287 111.430 105.680 1.00 41.37 C
ATOM 22 N2 G B2330 56.111 110.969 105.222 1.00 42.67 N
ATOM 23 N3 G B2330 57.334 112.578 106.322 1.00 40.25 N
ATOM 24 C4 G B2330 58.593 112.920 106.659 1.00 41.49 C
ATOM 25 P A B2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 26 OP1 A B2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 27 OP2 A B2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 28 O5' A B2331 56.571 112.652 111.427 1.00 39.45 O
TER
Atoms:
OP1: (67.665,116.450,109.764)
OP2: (66.863,114.816,107.964)
C3': (62.886,117.455,108.966)
C1': (62.361,118.032,106.745)
C5': (65.318,118.210,108.742)
O4': (63.648,118.549,107.046)
C8: (63.623,116.067,105.687)
O2': (60.976,118.853,108.484)
C6: (61.189,114.319,103.847)
C5: (62.049,115.129,104.614)
C4: (61.494,116.242,105.208)
P: (67.034,116.205,108.453)
C4': (63.866,118.512,108.476)
C2': (61.682,117.715,108.075)
C2: (59.502,115.802,104.381)
N1: (59.894,114.691,103.749)
N3: (60.213,116.643,105.131)
N6: (61.591,113.213,103.217)
N7: (63.400,115.034,104.918)
N9: (62.510,116.836,105.914)
O5': (65.588,116.862,108.355)
O3': (62.596,117.623,110.349)
OP2: (66.863,114.816,107.964)
C3': (62.886,117.455,108.966)
C1': (62.361,118.032,106.745)
C5': (65.318,118.210,108.742)
O4': (63.648,118.549,107.046)
C8: (63.623,116.067,105.687)
O2': (60.976,118.853,108.484)
C6: (61.189,114.319,103.847)
C5: (62.049,115.129,104.614)
C4: (61.494,116.242,105.208)
P: (67.034,116.205,108.453)
C4': (63.866,118.512,108.476)
C2': (61.682,117.715,108.075)
C2: (59.502,115.802,104.381)
N1: (59.894,114.691,103.749)
N3: (60.213,116.643,105.131)
N6: (61.591,113.213,103.217)
N7: (63.400,115.034,104.918)
N9: (62.510,116.836,105.914)
O5': (65.588,116.862,108.355)
O3': (62.596,117.623,110.349)
OP1: (61.903,116.878,112.618)
OP2: (63.181,115.290,111.067)
C3': (57.906,114.992,110.186)
C1': (58.088,115.116,107.835)
C5': (59.674,116.841,110.616)
O6: (60.612,110.151,105.521)
O4': (58.899,116.136,108.421)
C8: (60.344,114.012,107.440)
C2: (57.287,111.430,105.680)
C6: (59.695,110.957,105.773)
C5: (59.766,112.228,106.430)
C4: (58.593,112.920,106.659)
P: (62.172,116.360,111.247)
C4': (58.510,116.326,109.805)
C2': (57.106,114.673,108.933)
O2': (55.962,115.505,108.894)
N1: (58.388,110.647,105.420)
N2: (56.111,110.969,105.222)
N3: (57.334,112.578,106.322)
N7: (60.863,112.937,106.919)
N9: (58.970,114.061,107.328)
O5': (60.772,115.919,110.621)
O3': (57.095,115.073,111.355)
OP2: (63.181,115.290,111.067)
C3': (57.906,114.992,110.186)
C1': (58.088,115.116,107.835)
C5': (59.674,116.841,110.616)
O6: (60.612,110.151,105.521)
O4': (58.899,116.136,108.421)
C8: (60.344,114.012,107.440)
C2: (57.287,111.430,105.680)
C6: (59.695,110.957,105.773)
C5: (59.766,112.228,106.430)
C4: (58.593,112.920,106.659)
P: (62.172,116.360,111.247)
C4': (58.510,116.326,109.805)
C2': (57.106,114.673,108.933)
O2': (55.962,115.505,108.894)
N1: (58.388,110.647,105.420)
N2: (56.111,110.969,105.222)
N3: (57.334,112.578,106.322)
N7: (60.863,112.937,106.919)
N9: (58.970,114.061,107.328)
O5': (60.772,115.919,110.621)
O3': (57.095,115.073,111.355)
Image (generated by PyMOL):