ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01853:01854

Extra

PDB:
ATOM 1 O3' C A1852 117.835 101.328 82.600 1.00 62.94 O
ATOM 2 P A A1853 118.006 99.744 82.745 1.00 63.59 P
ATOM 3 OP1 A A1853 119.066 99.481 83.755 1.00 64.11 O
ATOM 4 OP2 A A1853 118.139 99.190 81.370 1.00 63.24 O
ATOM 5 O5' A A1853 116.616 99.241 83.336 1.00 62.07 O
ATOM 6 C5' A A1853 116.373 97.834 83.475 1.00 62.54 C
ATOM 7 C4' A A1853 115.018 97.575 84.085 1.00 62.83 C
ATOM 8 O4' A A1853 114.935 98.178 85.402 1.00 62.50 O
ATOM 9 C3' A A1853 113.810 98.148 83.370 1.00 62.51 C
ATOM 10 O3' A A1853 113.443 97.389 82.230 1.00 62.44 O
ATOM 11 C2' A A1853 112.761 98.074 84.466 1.00 62.86 C
ATOM 12 O2' A A1853 112.293 96.757 84.681 1.00 64.80 O
ATOM 13 C1' A A1853 113.583 98.503 85.682 1.00 62.80 C
ATOM 14 N9 A A1853 113.480 99.943 85.913 1.00 62.85 N
ATOM 15 C8 A A1853 114.461 100.904 85.868 1.00 62.99 C
ATOM 16 N7 A A1853 114.023 102.114 86.114 1.00 63.32 N
ATOM 17 C5 A A1853 112.665 101.937 86.336 1.00 63.54 C
ATOM 18 C6 A A1853 111.633 102.836 86.633 1.00 63.96 C
ATOM 19 N6 A A1853 111.816 104.148 86.762 1.00 65.71 N
ATOM 20 N1 A A1853 110.388 102.336 86.790 1.00 63.63 N
ATOM 21 C2 A A1853 110.204 101.019 86.647 1.00 62.70 C
ATOM 22 N3 A A1853 111.092 100.074 86.364 1.00 61.98 N
ATOM 23 C4 A A1853 112.318 100.606 86.219 1.00 62.88 C
ATOM 24 P G A1854 112.818 98.137 80.952 1.00 62.94 P
ATOM 25 OP1 G A1854 112.598 97.118 79.892 1.00 64.67 O
ATOM 26 OP2 G A1854 113.640 99.338 80.649 1.00 63.77 O
ATOM 27 O5' G A1854 111.398 98.634 81.468 1.00 59.78 O
TER

ATOM 1 O3' A B1853 113.443 97.389 82.230 1.00 62.44 O
ATOM 2 P G B1854 112.818 98.137 80.952 1.00 62.94 P
ATOM 3 OP1 G B1854 112.598 97.118 79.892 1.00 64.67 O
ATOM 4 OP2 G B1854 113.640 99.338 80.649 1.00 63.77 O
ATOM 5 O5' G B1854 111.398 98.634 81.468 1.00 59.78 O
ATOM 6 C5' G B1854 110.348 97.698 81.750 1.00 55.41 C
ATOM 7 C4' G B1854 109.073 98.437 82.045 1.00 53.11 C
ATOM 8 O4' G B1854 109.240 99.193 83.264 1.00 52.50 O
ATOM 9 C3' G B1854 108.680 99.469 81.004 1.00 51.49 C
ATOM 10 O3' G B1854 107.947 98.857 79.956 1.00 51.54 O
ATOM 11 C2' G B1854 107.826 100.432 81.811 1.00 52.20 C
ATOM 12 O2' G B1854 106.504 99.971 82.006 1.00 51.37 O
ATOM 13 C1' G B1854 108.565 100.430 83.152 1.00 52.31 C
ATOM 14 N9 G B1854 109.553 101.496 83.275 1.00 52.45 N
ATOM 15 C8 G B1854 110.918 101.366 83.376 1.00 51.21 C
ATOM 16 N7 G B1854 111.536 102.510 83.472 1.00 50.77 N
ATOM 17 C5 G B1854 110.519 103.451 83.431 1.00 52.33 C
ATOM 18 C6 G B1854 110.575 104.860 83.478 1.00 52.93 C
ATOM 19 O6 G B1854 111.570 105.585 83.568 1.00 55.02 O
ATOM 20 N1 G B1854 109.306 105.425 83.397 1.00 52.39 N
ATOM 21 C2 G B1854 108.135 104.721 83.279 1.00 51.03 C
ATOM 22 N2 G B1854 107.019 105.440 83.195 1.00 50.81 N
ATOM 23 N3 G B1854 108.068 103.408 83.238 1.00 51.33 N
ATOM 24 C4 G B1854 109.290 102.840 83.314 1.00 52.51 C
ATOM 25 P U B1855 108.197 99.304 78.437 1.00 51.28 P
ATOM 26 OP1 U B1855 107.354 98.434 77.579 1.00 50.84 O
ATOM 27 OP2 U B1855 109.653 99.394 78.189 1.00 52.11 O
ATOM 28 O5' U B1855 107.628 100.783 78.383 1.00 51.26 O
TER

Atoms:
OP1: (119.066,99.481,83.755)
OP2: (118.139,99.190,81.370)
C3': (113.810,98.148,83.370)
C1': (113.583,98.503,85.682)
C5': (116.373,97.834,83.475)
O4': (114.935,98.178,85.402)
C8: (114.461,100.904,85.868)
O2': (112.293,96.757,84.681)
C6: (111.633,102.836,86.633)
C5: (112.665,101.937,86.336)
C4: (112.318,100.606,86.219)
P: (118.006,99.744,82.745)
C4': (115.018,97.575,84.085)
C2': (112.761,98.074,84.466)
C2: (110.204,101.019,86.647)
N1: (110.388,102.336,86.790)
N3: (111.092,100.074,86.364)
N6: (111.816,104.148,86.762)
N7: (114.023,102.114,86.114)
N9: (113.480,99.943,85.913)
O5': (116.616,99.241,83.336)
O3': (113.443,97.389,82.230)
OP1: (112.598,97.118,79.892)
OP2: (113.640,99.338,80.649)
C3': (108.680,99.469,81.004)
C1': (108.565,100.430,83.152)
C5': (110.348,97.698,81.750)
O6: (111.570,105.585,83.568)
O4': (109.240,99.193,83.264)
C8: (110.918,101.366,83.376)
C2: (108.135,104.721,83.279)
C6: (110.575,104.860,83.478)
C5: (110.519,103.451,83.431)
C4: (109.290,102.840,83.314)
P: (112.818,98.137,80.952)
C4': (109.073,98.437,82.045)
C2': (107.826,100.432,81.811)
O2': (106.504,99.971,82.006)
N1: (109.306,105.425,83.397)
N2: (107.019,105.440,83.195)
N3: (108.068,103.408,83.238)
N7: (111.536,102.510,83.472)
N9: (109.553,101.496,83.275)
O5': (111.398,98.634,81.468)
O3': (107.947,98.857,79.956)
Image (generated by PyMOL):
PyMOL image
show in jmol