Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0319:0320
Extra
PDB:
ATOM 1 O3' C A 318 18.258 125.086 32.035 1.00 52.18 O
ATOM 2 P A A 319 19.747 124.500 32.161 1.00 52.45 P
ATOM 3 OP1 A A 319 20.337 124.382 30.805 1.00 52.30 O
ATOM 4 OP2 A A 319 19.684 123.303 33.033 1.00 51.52 O
ATOM 5 O5' A A 319 20.515 125.646 32.958 1.00 51.95 O
ATOM 6 C5' A A 319 21.296 126.631 32.266 1.00 49.60 C
ATOM 7 C4' A A 319 22.740 126.533 32.685 1.00 48.15 C
ATOM 8 O4' A A 319 23.578 126.854 31.547 1.00 50.01 O
ATOM 9 C3' A A 319 23.212 127.471 33.786 1.00 46.70 C
ATOM 10 O3' A A 319 22.956 127.006 35.101 1.00 46.20 O
ATOM 11 C2' A A 319 24.702 127.500 33.519 1.00 48.42 C
ATOM 12 O2' A A 319 25.316 126.312 33.975 1.00 48.17 O
ATOM 13 C1' A A 319 24.724 127.561 31.987 1.00 50.00 C
ATOM 14 N9 A A 319 24.614 128.948 31.515 1.00 51.05 N
ATOM 15 C8 A A 319 23.478 129.618 31.129 1.00 50.37 C
ATOM 16 N7 A A 319 23.680 130.881 30.847 1.00 50.71 N
ATOM 17 C5 A A 319 25.041 131.054 31.042 1.00 50.29 C
ATOM 18 C6 A A 319 25.872 132.180 30.938 1.00 49.70 C
ATOM 19 N6 A A 319 25.433 133.397 30.622 1.00 48.91 N
ATOM 20 N1 A A 319 27.186 132.014 31.189 1.00 50.46 N
ATOM 21 C2 A A 319 27.624 130.798 31.535 1.00 51.10 C
ATOM 22 N3 A A 319 26.941 129.669 31.684 1.00 50.67 N
ATOM 23 C4 A A 319 25.636 129.866 31.423 1.00 50.98 C
ATOM 24 P G A 320 22.537 128.050 36.255 1.00 46.70 P
ATOM 25 OP1 G A 320 22.582 127.306 37.537 1.00 45.22 O
ATOM 26 OP2 G A 320 21.293 128.753 35.855 1.00 46.10 O
ATOM 27 O5' G A 320 23.702 129.132 36.267 1.00 48.19 O
TER
ATOM 1 O3' A B 319 22.956 127.006 35.101 1.00 46.20 O
ATOM 2 P G B 320 22.537 128.050 36.255 1.00 46.70 P
ATOM 3 OP1 G B 320 22.582 127.306 37.537 1.00 45.22 O
ATOM 4 OP2 G B 320 21.293 128.753 35.855 1.00 46.10 O
ATOM 5 O5' G B 320 23.702 129.132 36.267 1.00 48.19 O
ATOM 6 C5' G B 320 24.994 128.831 36.829 1.00 47.92 C
ATOM 7 C4' G B 320 25.908 130.033 36.724 1.00 46.41 C
ATOM 8 O4' G B 320 26.236 130.297 35.329 1.00 45.78 O
ATOM 9 C3' G B 320 25.352 131.352 37.230 1.00 45.16 C
ATOM 10 O3' G B 320 25.429 131.501 38.636 1.00 44.39 O
ATOM 11 C2' G B 320 26.228 132.343 36.485 1.00 47.24 C
ATOM 12 O2' G B 320 27.531 132.409 37.036 1.00 46.48 O
ATOM 13 C1' G B 320 26.263 131.698 35.097 1.00 48.11 C
ATOM 14 N9 G B 320 25.053 132.057 34.354 1.00 52.12 N
ATOM 15 C8 G B 320 23.930 131.278 34.184 1.00 53.03 C
ATOM 16 N7 G B 320 22.963 131.895 33.564 1.00 54.29 N
ATOM 17 C5 G B 320 23.478 133.155 33.282 1.00 54.73 C
ATOM 18 C6 G B 320 22.878 134.270 32.635 1.00 54.79 C
ATOM 19 O6 G B 320 21.733 134.368 32.172 1.00 54.88 O
ATOM 20 N1 G B 320 23.754 135.349 32.556 1.00 53.54 N
ATOM 21 C2 G B 320 25.036 135.360 33.035 1.00 53.46 C
ATOM 22 N2 G B 320 25.710 136.500 32.865 1.00 53.03 N
ATOM 23 N3 G B 320 25.612 134.330 33.640 1.00 54.41 N
ATOM 24 C4 G B 320 24.778 133.267 33.736 1.00 54.32 C
ATOM 25 P G B 321 24.496 132.583 39.369 1.00 45.00 P
ATOM 26 OP1 G B 321 24.802 132.553 40.818 1.00 47.54 O
ATOM 27 OP2 G B 321 23.107 132.397 38.921 1.00 47.54 O
ATOM 28 O5' G B 321 25.003 133.975 38.798 1.00 45.92 O
TER
ATOM 2 P A A 319 19.747 124.500 32.161 1.00 52.45 P
ATOM 3 OP1 A A 319 20.337 124.382 30.805 1.00 52.30 O
ATOM 4 OP2 A A 319 19.684 123.303 33.033 1.00 51.52 O
ATOM 5 O5' A A 319 20.515 125.646 32.958 1.00 51.95 O
ATOM 6 C5' A A 319 21.296 126.631 32.266 1.00 49.60 C
ATOM 7 C4' A A 319 22.740 126.533 32.685 1.00 48.15 C
ATOM 8 O4' A A 319 23.578 126.854 31.547 1.00 50.01 O
ATOM 9 C3' A A 319 23.212 127.471 33.786 1.00 46.70 C
ATOM 10 O3' A A 319 22.956 127.006 35.101 1.00 46.20 O
ATOM 11 C2' A A 319 24.702 127.500 33.519 1.00 48.42 C
ATOM 12 O2' A A 319 25.316 126.312 33.975 1.00 48.17 O
ATOM 13 C1' A A 319 24.724 127.561 31.987 1.00 50.00 C
ATOM 14 N9 A A 319 24.614 128.948 31.515 1.00 51.05 N
ATOM 15 C8 A A 319 23.478 129.618 31.129 1.00 50.37 C
ATOM 16 N7 A A 319 23.680 130.881 30.847 1.00 50.71 N
ATOM 17 C5 A A 319 25.041 131.054 31.042 1.00 50.29 C
ATOM 18 C6 A A 319 25.872 132.180 30.938 1.00 49.70 C
ATOM 19 N6 A A 319 25.433 133.397 30.622 1.00 48.91 N
ATOM 20 N1 A A 319 27.186 132.014 31.189 1.00 50.46 N
ATOM 21 C2 A A 319 27.624 130.798 31.535 1.00 51.10 C
ATOM 22 N3 A A 319 26.941 129.669 31.684 1.00 50.67 N
ATOM 23 C4 A A 319 25.636 129.866 31.423 1.00 50.98 C
ATOM 24 P G A 320 22.537 128.050 36.255 1.00 46.70 P
ATOM 25 OP1 G A 320 22.582 127.306 37.537 1.00 45.22 O
ATOM 26 OP2 G A 320 21.293 128.753 35.855 1.00 46.10 O
ATOM 27 O5' G A 320 23.702 129.132 36.267 1.00 48.19 O
TER
ATOM 1 O3' A B 319 22.956 127.006 35.101 1.00 46.20 O
ATOM 2 P G B 320 22.537 128.050 36.255 1.00 46.70 P
ATOM 3 OP1 G B 320 22.582 127.306 37.537 1.00 45.22 O
ATOM 4 OP2 G B 320 21.293 128.753 35.855 1.00 46.10 O
ATOM 5 O5' G B 320 23.702 129.132 36.267 1.00 48.19 O
ATOM 6 C5' G B 320 24.994 128.831 36.829 1.00 47.92 C
ATOM 7 C4' G B 320 25.908 130.033 36.724 1.00 46.41 C
ATOM 8 O4' G B 320 26.236 130.297 35.329 1.00 45.78 O
ATOM 9 C3' G B 320 25.352 131.352 37.230 1.00 45.16 C
ATOM 10 O3' G B 320 25.429 131.501 38.636 1.00 44.39 O
ATOM 11 C2' G B 320 26.228 132.343 36.485 1.00 47.24 C
ATOM 12 O2' G B 320 27.531 132.409 37.036 1.00 46.48 O
ATOM 13 C1' G B 320 26.263 131.698 35.097 1.00 48.11 C
ATOM 14 N9 G B 320 25.053 132.057 34.354 1.00 52.12 N
ATOM 15 C8 G B 320 23.930 131.278 34.184 1.00 53.03 C
ATOM 16 N7 G B 320 22.963 131.895 33.564 1.00 54.29 N
ATOM 17 C5 G B 320 23.478 133.155 33.282 1.00 54.73 C
ATOM 18 C6 G B 320 22.878 134.270 32.635 1.00 54.79 C
ATOM 19 O6 G B 320 21.733 134.368 32.172 1.00 54.88 O
ATOM 20 N1 G B 320 23.754 135.349 32.556 1.00 53.54 N
ATOM 21 C2 G B 320 25.036 135.360 33.035 1.00 53.46 C
ATOM 22 N2 G B 320 25.710 136.500 32.865 1.00 53.03 N
ATOM 23 N3 G B 320 25.612 134.330 33.640 1.00 54.41 N
ATOM 24 C4 G B 320 24.778 133.267 33.736 1.00 54.32 C
ATOM 25 P G B 321 24.496 132.583 39.369 1.00 45.00 P
ATOM 26 OP1 G B 321 24.802 132.553 40.818 1.00 47.54 O
ATOM 27 OP2 G B 321 23.107 132.397 38.921 1.00 47.54 O
ATOM 28 O5' G B 321 25.003 133.975 38.798 1.00 45.92 O
TER
Atoms:
OP1: (20.337,124.382,30.805)
OP2: (19.684,123.303,33.033)
C3': (23.212,127.471,33.786)
C1': (24.724,127.561,31.987)
C5': (21.296,126.631,32.266)
O4': (23.578,126.854,31.547)
C8: (23.478,129.618,31.129)
O2': (25.316,126.312,33.975)
C6: (25.872,132.180,30.938)
C5: (25.041,131.054,31.042)
C4: (25.636,129.866,31.423)
P: (19.747,124.500,32.161)
C4': (22.740,126.533,32.685)
C2': (24.702,127.500,33.519)
C2: (27.624,130.798,31.535)
N1: (27.186,132.014,31.189)
N3: (26.941,129.669,31.684)
N6: (25.433,133.397,30.622)
N7: (23.680,130.881,30.847)
N9: (24.614,128.948,31.515)
O5': (20.515,125.646,32.958)
O3': (22.956,127.006,35.101)
OP2: (19.684,123.303,33.033)
C3': (23.212,127.471,33.786)
C1': (24.724,127.561,31.987)
C5': (21.296,126.631,32.266)
O4': (23.578,126.854,31.547)
C8: (23.478,129.618,31.129)
O2': (25.316,126.312,33.975)
C6: (25.872,132.180,30.938)
C5: (25.041,131.054,31.042)
C4: (25.636,129.866,31.423)
P: (19.747,124.500,32.161)
C4': (22.740,126.533,32.685)
C2': (24.702,127.500,33.519)
C2: (27.624,130.798,31.535)
N1: (27.186,132.014,31.189)
N3: (26.941,129.669,31.684)
N6: (25.433,133.397,30.622)
N7: (23.680,130.881,30.847)
N9: (24.614,128.948,31.515)
O5': (20.515,125.646,32.958)
O3': (22.956,127.006,35.101)
OP1: (22.582,127.306,37.537)
OP2: (21.293,128.753,35.855)
C3': (25.352,131.352,37.230)
C1': (26.263,131.698,35.097)
C5': (24.994,128.831,36.829)
O6: (21.733,134.368,32.172)
O4': (26.236,130.297,35.329)
C8: (23.930,131.278,34.184)
C2: (25.036,135.360,33.035)
C6: (22.878,134.270,32.635)
C5: (23.478,133.155,33.282)
C4: (24.778,133.267,33.736)
P: (22.537,128.050,36.255)
C4': (25.908,130.033,36.724)
C2': (26.228,132.343,36.485)
O2': (27.531,132.409,37.036)
N1: (23.754,135.349,32.556)
N2: (25.710,136.500,32.865)
N3: (25.612,134.330,33.640)
N7: (22.963,131.895,33.564)
N9: (25.053,132.057,34.354)
O5': (23.702,129.132,36.267)
O3': (25.429,131.501,38.636)
OP2: (21.293,128.753,35.855)
C3': (25.352,131.352,37.230)
C1': (26.263,131.698,35.097)
C5': (24.994,128.831,36.829)
O6: (21.733,134.368,32.172)
O4': (26.236,130.297,35.329)
C8: (23.930,131.278,34.184)
C2: (25.036,135.360,33.035)
C6: (22.878,134.270,32.635)
C5: (23.478,133.155,33.282)
C4: (24.778,133.267,33.736)
P: (22.537,128.050,36.255)
C4': (25.908,130.033,36.724)
C2': (26.228,132.343,36.485)
O2': (27.531,132.409,37.036)
N1: (23.754,135.349,32.556)
N2: (25.710,136.500,32.865)
N3: (25.612,134.330,33.640)
N7: (22.963,131.895,33.564)
N9: (25.053,132.057,34.354)
O5': (23.702,129.132,36.267)
O3': (25.429,131.501,38.636)
Image (generated by PyMOL):