ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MJB:B2:B3

Extra

PDB:
ATOM 1 O3' A A 1 12.241 13.876 -21.857 1.00 56.45 O
ATOM 2 P A A 2 13.383 12.903 -21.287 1.00 55.89 P
ATOM 3 OP1 A A 2 12.887 11.517 -21.479 1.00 56.43 O
ATOM 4 OP2 A A 2 13.809 13.369 -19.931 1.00 54.02 O
ATOM 5 O5' A A 2 14.599 13.106 -22.297 1.00 53.73 O
ATOM 6 C5' A A 2 14.476 12.732 -23.669 1.00 50.10 C
ATOM 7 C4' A A 2 15.713 13.138 -24.434 1.00 47.43 C
ATOM 8 O4' A A 2 15.865 14.583 -24.386 1.00 47.57 O
ATOM 9 C3' A A 2 17.007 12.623 -23.850 1.00 46.91 C
ATOM 10 O3' A A 2 17.257 11.302 -24.283 1.00 47.61 O
ATOM 11 C2' A A 2 18.018 13.621 -24.386 1.00 46.18 C
ATOM 12 O2' A A 2 18.309 13.396 -25.748 1.00 47.96 O
ATOM 13 C1' A A 2 17.235 14.926 -24.246 1.00 45.43 C
ATOM 14 N9 A A 2 17.409 15.581 -22.945 1.00 42.17 N
ATOM 15 C8 A A 2 16.556 15.535 -21.876 1.00 42.14 C
ATOM 16 N7 A A 2 16.978 16.202 -20.833 1.00 42.18 N
ATOM 17 C5 A A 2 18.191 16.728 -21.242 1.00 40.65 C
ATOM 18 C6 A A 2 19.141 17.546 -20.590 1.00 41.08 C
ATOM 19 N6 A A 2 19.006 17.998 -19.336 1.00 40.16 N
ATOM 20 N1 A A 2 20.248 17.896 -21.284 1.00 40.89 N
ATOM 21 C2 A A 2 20.376 17.461 -22.540 1.00 40.91 C
ATOM 22 N3 A A 2 19.551 16.695 -23.260 1.00 41.63 N
ATOM 23 C4 A A 2 18.467 16.359 -22.543 1.00 40.69 C
ATOM 24 P G A 3 18.050 10.306 -23.313 1.00 46.41 P
ATOM 25 OP1 G A 3 18.268 9.031 -24.041 1.00 46.92 O
ATOM 26 OP2 G A 3 17.356 10.294 -21.998 1.00 46.71 O
ATOM 27 O5' G A 3 19.437 11.051 -23.094 1.00 45.19 O
TER

ATOM 1 O3' A B 2 17.257 11.302 -24.283 1.00 47.61 O
ATOM 2 P G B 3 18.050 10.306 -23.313 1.00 46.41 P
ATOM 3 OP1 G B 3 18.268 9.031 -24.041 1.00 46.92 O
ATOM 4 OP2 G B 3 17.356 10.294 -21.998 1.00 46.71 O
ATOM 5 O5' G B 3 19.437 11.051 -23.094 1.00 45.19 O
ATOM 6 C5' G B 3 20.377 11.171 -24.149 1.00 41.33 C
ATOM 7 C4' G B 3 21.535 12.024 -23.701 1.00 41.28 C
ATOM 8 O4' G B 3 21.035 13.327 -23.305 1.00 39.59 O
ATOM 9 C3' G B 3 22.265 11.544 -22.461 1.00 41.41 C
ATOM 10 O3' G B 3 23.224 10.550 -22.805 1.00 42.72 O
ATOM 11 C2' G B 3 22.933 12.824 -21.986 1.00 39.67 C
ATOM 12 O2' G B 3 24.096 13.116 -22.723 1.00 40.32 O
ATOM 13 C1' G B 3 21.860 13.863 -22.298 1.00 38.59 C
ATOM 14 N9 G B 3 21.035 14.122 -21.133 1.00 39.01 N
ATOM 15 C8 G B 3 19.756 13.686 -20.899 1.00 38.44 C
ATOM 16 N7 G B 3 19.310 14.024 -19.719 1.00 39.67 N
ATOM 17 C5 G B 3 20.355 14.741 -19.148 1.00 40.19 C
ATOM 18 C6 G B 3 20.473 15.348 -17.866 1.00 41.33 C
ATOM 19 O6 G B 3 19.652 15.364 -16.937 1.00 42.63 O
ATOM 20 N1 G B 3 21.704 15.977 -17.710 1.00 40.61 N
ATOM 21 C2 G B 3 22.700 16.011 -18.654 1.00 40.95 C
ATOM 22 N2 G B 3 23.820 16.663 -18.307 1.00 43.29 N
ATOM 23 N3 G B 3 22.607 15.447 -19.845 1.00 40.32 N
ATOM 24 C4 G B 3 21.417 14.830 -20.022 1.00 39.95 C
ATOM 25 P A B 4 23.501 9.320 -21.802 1.00 45.05 P
ATOM 26 OP1 A B 4 24.433 8.421 -22.540 1.00 45.88 O
ATOM 27 OP2 A B 4 22.217 8.775 -21.281 1.00 45.38 O
ATOM 28 O5' A B 4 24.265 10.004 -20.579 1.00 44.84 O
TER

Atoms:
OP1: (12.887,11.517,-21.479)
OP2: (13.809,13.369,-19.931)
C3': (17.007,12.623,-23.850)
C1': (17.235,14.926,-24.246)
C5': (14.476,12.732,-23.669)
O4': (15.865,14.583,-24.386)
C8: (16.556,15.535,-21.876)
O2': (18.309,13.396,-25.748)
C6: (19.141,17.546,-20.590)
C5: (18.191,16.728,-21.242)
C4: (18.467,16.359,-22.543)
P: (13.383,12.903,-21.287)
C4': (15.713,13.138,-24.434)
C2': (18.018,13.621,-24.386)
C2: (20.376,17.461,-22.540)
N1: (20.248,17.896,-21.284)
N3: (19.551,16.695,-23.260)
N6: (19.006,17.998,-19.336)
N7: (16.978,16.202,-20.833)
N9: (17.409,15.581,-22.945)
O5': (14.599,13.106,-22.297)
O3': (17.257,11.302,-24.283)
OP1: (18.268,9.031,-24.041)
OP2: (17.356,10.294,-21.998)
C3': (22.265,11.544,-22.461)
C1': (21.860,13.863,-22.298)
C5': (20.377,11.171,-24.149)
O6: (19.652,15.364,-16.937)
O4': (21.035,13.327,-23.305)
C8: (19.756,13.686,-20.899)
C2: (22.700,16.011,-18.654)
C6: (20.473,15.348,-17.866)
C5: (20.355,14.741,-19.148)
C4: (21.417,14.830,-20.022)
P: (18.050,10.306,-23.313)
C4': (21.535,12.024,-23.701)
C2': (22.933,12.824,-21.986)
O2': (24.096,13.116,-22.723)
N1: (21.704,15.977,-17.710)
N2: (23.820,16.663,-18.307)
N3: (22.607,15.447,-19.845)
N7: (19.310,14.024,-19.719)
N9: (21.035,14.122,-21.133)
O5': (19.437,11.051,-23.094)
O3': (23.224,10.550,-22.805)
Image (generated by PyMOL):
PyMOL image
show in jmol