ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCV:0579:0580

Extra

PDB:
ATOM 1 O3' A A 578 -11.360 99.636 107.572 1.00 63.65 O
ATOM 2 P A A 579 -10.776 99.986 106.123 1.00 66.88 P
ATOM 3 OP1 A A 579 -11.501 101.184 105.623 1.00 67.24 O
ATOM 4 OP2 A A 579 -10.772 98.728 105.314 1.00 65.27 O
ATOM 5 O5' A A 579 -9.268 100.397 106.433 1.00 65.22 O
ATOM 6 C5' A A 579 -8.969 101.449 107.378 1.00 62.78 C
ATOM 7 C4' A A 579 -7.497 101.440 107.716 1.00 61.31 C
ATOM 8 O4' A A 579 -7.155 100.135 108.251 1.00 61.36 O
ATOM 9 C3' A A 579 -6.544 101.612 106.543 1.00 60.00 C
ATOM 10 O3' A A 579 -6.359 102.987 106.211 1.00 58.42 O
ATOM 11 C2' A A 579 -5.275 100.967 107.078 1.00 59.48 C
ATOM 12 O2' A A 579 -4.613 101.793 108.012 1.00 59.54 O
ATOM 13 C1' A A 579 -5.852 99.773 107.836 1.00 59.24 C
ATOM 14 N9 A A 579 -5.964 98.570 107.018 1.00 57.96 N
ATOM 15 C8 A A 579 -7.111 97.968 106.567 1.00 57.10 C
ATOM 16 N7 A A 579 -6.895 96.893 105.849 1.00 57.38 N
ATOM 17 C5 A A 579 -5.512 96.780 105.824 1.00 56.44 C
ATOM 18 C6 A A 579 -4.650 95.849 105.220 1.00 55.45 C
ATOM 19 N6 A A 579 -5.073 94.816 104.493 1.00 55.62 N
ATOM 20 N1 A A 579 -3.323 96.019 105.388 1.00 54.40 N
ATOM 21 C2 A A 579 -2.899 97.061 106.113 1.00 55.80 C
ATOM 22 N3 A A 579 -3.609 98.007 106.727 1.00 56.56 N
ATOM 23 C4 A A 579 -4.925 97.805 106.541 1.00 57.08 C
ATOM 24 P G A 580 -6.353 103.443 104.667 1.00 58.33 P
ATOM 25 OP1 G A 580 -6.062 104.898 104.660 1.00 57.13 O
ATOM 26 OP2 G A 580 -7.574 102.933 103.984 1.00 57.27 O
ATOM 27 O5' G A 580 -5.112 102.669 104.037 1.00 57.49 O
TER

ATOM 1 O3' A B 579 -6.359 102.987 106.211 1.00 58.42 O
ATOM 2 P G B 580 -6.353 103.443 104.667 1.00 58.33 P
ATOM 3 OP1 G B 580 -6.062 104.898 104.660 1.00 57.13 O
ATOM 4 OP2 G B 580 -7.574 102.933 103.984 1.00 57.27 O
ATOM 5 O5' G B 580 -5.112 102.669 104.037 1.00 57.49 O
ATOM 6 C5' G B 580 -3.764 102.965 104.446 1.00 54.06 C
ATOM 7 C4' G B 580 -2.813 101.974 103.829 1.00 52.89 C
ATOM 8 O4' G B 580 -3.132 100.646 104.312 1.00 53.30 O
ATOM 9 C3' G B 580 -2.903 101.844 102.318 1.00 52.30 C
ATOM 10 O3' G B 580 -2.124 102.834 101.677 1.00 52.60 O
ATOM 11 C2' G B 580 -2.334 100.454 102.077 1.00 52.29 C
ATOM 12 O2' G B 580 -0.923 100.410 102.098 1.00 51.64 O
ATOM 13 C1' G B 580 -2.879 99.697 103.290 1.00 52.89 C
ATOM 14 N9 G B 580 -4.125 99.011 102.982 1.00 52.68 N
ATOM 15 C8 G B 580 -5.404 99.476 103.169 1.00 53.06 C
ATOM 16 N7 G B 580 -6.315 98.631 102.774 1.00 53.43 N
ATOM 17 C5 G B 580 -5.591 97.545 102.304 1.00 53.24 C
ATOM 18 C6 G B 580 -6.031 96.323 101.752 1.00 54.12 C
ATOM 19 O6 G B 580 -7.191 95.939 101.565 1.00 56.34 O
ATOM 20 N1 G B 580 -4.960 95.505 101.406 1.00 53.60 N
ATOM 21 C2 G B 580 -3.634 95.824 101.577 1.00 53.77 C
ATOM 22 N2 G B 580 -2.742 94.903 101.188 1.00 54.20 N
ATOM 23 N3 G B 580 -3.214 96.962 102.092 1.00 52.76 N
ATOM 24 C4 G B 580 -4.238 97.768 102.431 1.00 52.50 C
ATOM 25 P A B 581 -2.840 104.099 101.006 1.00 54.74 P
ATOM 26 OP1 A B 581 -2.965 105.148 102.056 1.00 52.93 O
ATOM 27 OP2 A B 581 -4.050 103.629 100.283 1.00 52.56 O
ATOM 28 O5' A B 581 -1.779 104.592 99.926 1.00 54.25 O
TER

Atoms:
OP1: (-11.501,101.184,105.623)
OP2: (-10.772,98.728,105.314)
C3': (-6.544,101.612,106.543)
C1': (-5.852,99.773,107.836)
C5': (-8.969,101.449,107.378)
O4': (-7.155,100.135,108.251)
C8: (-7.111,97.968,106.567)
O2': (-4.613,101.793,108.012)
C6: (-4.650,95.849,105.220)
C5: (-5.512,96.780,105.824)
C4: (-4.925,97.805,106.541)
P: (-10.776,99.986,106.123)
C4': (-7.497,101.440,107.716)
C2': (-5.275,100.967,107.078)
C2: (-2.899,97.061,106.113)
N1: (-3.323,96.019,105.388)
N3: (-3.609,98.007,106.727)
N6: (-5.073,94.816,104.493)
N7: (-6.895,96.893,105.849)
N9: (-5.964,98.570,107.018)
O5': (-9.268,100.397,106.433)
O3': (-6.359,102.987,106.211)
OP1: (-6.062,104.898,104.660)
OP2: (-7.574,102.933,103.984)
C3': (-2.903,101.844,102.318)
C1': (-2.879,99.697,103.290)
C5': (-3.764,102.965,104.446)
O6: (-7.191,95.939,101.565)
O4': (-3.132,100.646,104.312)
C8: (-5.404,99.476,103.169)
C2: (-3.634,95.824,101.577)
C6: (-6.031,96.323,101.752)
C5: (-5.591,97.545,102.304)
C4: (-4.238,97.768,102.431)
P: (-6.353,103.443,104.667)
C4': (-2.813,101.974,103.829)
C2': (-2.334,100.454,102.077)
O2': (-0.923,100.410,102.098)
N1: (-4.960,95.505,101.406)
N2: (-2.742,94.903,101.188)
N3: (-3.214,96.962,102.092)
N7: (-6.315,98.631,102.774)
N9: (-4.125,99.011,102.982)
O5': (-5.112,102.669,104.037)
O3': (-2.124,102.834,101.677)
Image (generated by PyMOL):
PyMOL image
show in jmol