ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:0309:0310

Extra

PDB:
ATOM 1 O3' G A 308 0.670 130.599 45.323 1.00 56.90 O
ATOM 2 P A A 309 0.251 129.895 43.944 1.00 58.93 P
ATOM 3 OP1 A A 309 -0.123 128.493 44.268 1.00 57.65 O
ATOM 4 OP2 A A 309 1.323 130.158 42.943 1.00 58.09 O
ATOM 5 O5' A A 309 -1.045 130.706 43.486 1.00 58.90 O
ATOM 6 C5' A A 309 -2.317 130.504 44.126 1.00 59.71 C
ATOM 7 C4' A A 309 -3.356 131.419 43.523 1.00 61.22 C
ATOM 8 O4' A A 309 -2.956 132.797 43.750 1.00 61.73 O
ATOM 9 C3' A A 309 -3.531 131.357 42.013 1.00 62.69 C
ATOM 10 O3' A A 309 -4.324 130.272 41.554 1.00 63.72 O
ATOM 11 C2' A A 309 -4.177 132.700 41.718 1.00 62.77 C
ATOM 12 O2' A A 309 -5.549 132.742 42.045 1.00 63.32 O
ATOM 13 C1' A A 309 -3.396 133.609 42.666 1.00 62.99 C
ATOM 14 N9 A A 309 -2.228 134.173 41.983 1.00 63.32 N
ATOM 15 C8 A A 309 -0.937 133.694 41.956 1.00 62.99 C
ATOM 16 N7 A A 309 -0.129 134.397 41.199 1.00 62.20 N
ATOM 17 C5 A A 309 -0.934 135.415 40.706 1.00 61.74 C
ATOM 18 C6 A A 309 -0.675 136.484 39.840 1.00 60.66 C
ATOM 19 N6 A A 309 0.515 136.718 39.294 1.00 59.73 N
ATOM 20 N1 A A 309 -1.695 137.318 39.548 1.00 60.78 N
ATOM 21 C2 A A 309 -2.892 137.083 40.096 1.00 60.89 C
ATOM 22 N3 A A 309 -3.262 136.111 40.923 1.00 61.40 N
ATOM 23 C4 A A 309 -2.225 135.298 41.191 1.00 62.45 C
ATOM 24 P G A 310 -4.123 129.729 40.051 1.00 67.16 P
ATOM 25 OP1 G A 310 -5.077 128.609 39.853 1.00 67.83 O
ATOM 26 OP2 G A 310 -2.676 129.500 39.815 1.00 67.29 O
ATOM 27 O5' G A 310 -4.576 130.947 39.133 1.00 66.23 O
TER

ATOM 1 O3' A B 309 -4.324 130.272 41.554 1.00 63.72 O
ATOM 2 P G B 310 -4.123 129.729 40.051 1.00 67.16 P
ATOM 3 OP1 G B 310 -5.077 128.609 39.853 1.00 67.83 O
ATOM 4 OP2 G B 310 -2.676 129.500 39.815 1.00 67.29 O
ATOM 5 O5' G B 310 -4.576 130.947 39.133 1.00 66.23 O
ATOM 6 C5' G B 310 -5.940 131.382 39.130 1.00 69.46 C
ATOM 7 C4' G B 310 -6.133 132.519 38.160 1.00 71.45 C
ATOM 8 O4' G B 310 -5.360 133.668 38.590 1.00 72.62 O
ATOM 9 C3' G B 310 -5.637 132.296 36.747 1.00 72.89 C
ATOM 10 O3' G B 310 -6.506 131.505 35.961 1.00 74.50 O
ATOM 11 C2' G B 310 -5.547 133.718 36.230 1.00 73.27 C
ATOM 12 O2' G B 310 -6.814 134.250 35.904 1.00 73.11 O
ATOM 13 C1' G B 310 -4.976 134.430 37.456 1.00 73.44 C
ATOM 14 N9 G B 310 -3.517 134.480 37.393 1.00 74.45 N
ATOM 15 C8 G B 310 -2.619 133.637 38.001 1.00 74.82 C
ATOM 16 N7 G B 310 -1.377 133.916 37.710 1.00 75.58 N
ATOM 17 C5 G B 310 -1.461 135.015 36.866 1.00 76.20 C
ATOM 18 C6 G B 310 -0.440 135.760 36.216 1.00 77.27 C
ATOM 19 O6 G B 310 0.786 135.587 36.253 1.00 78.83 O
ATOM 20 N1 G B 310 -0.970 136.798 35.456 1.00 76.69 N
ATOM 21 C2 G B 310 -2.306 137.082 35.333 1.00 75.83 C
ATOM 22 N2 G B 310 -2.622 138.123 34.555 1.00 75.88 N
ATOM 23 N3 G B 310 -3.263 136.396 35.928 1.00 75.57 N
ATOM 24 C4 G B 310 -2.773 135.383 36.672 1.00 75.29 C
ATOM 25 P C B 311 -5.887 130.593 34.796 1.00 75.87 P
ATOM 26 OP1 C B 311 -6.989 129.770 34.245 1.00 76.92 O
ATOM 27 OP2 C B 311 -4.670 129.925 35.336 1.00 75.22 O
ATOM 28 O5' C B 311 -5.428 131.642 33.686 1.00 75.50 O
TER

Atoms:
OP1: (-0.123,128.493,44.268)
OP2: (1.323,130.158,42.943)
C3': (-3.531,131.357,42.013)
C1': (-3.396,133.609,42.666)
C5': (-2.317,130.504,44.126)
O4': (-2.956,132.797,43.750)
C8: (-0.937,133.694,41.956)
O2': (-5.549,132.742,42.045)
C6: (-0.675,136.484,39.840)
C5: (-0.934,135.415,40.706)
C4: (-2.225,135.298,41.191)
P: (0.251,129.895,43.944)
C4': (-3.356,131.419,43.523)
C2': (-4.177,132.700,41.718)
C2: (-2.892,137.083,40.096)
N1: (-1.695,137.318,39.548)
N3: (-3.262,136.111,40.923)
N6: (0.515,136.718,39.294)
N7: (-0.129,134.397,41.199)
N9: (-2.228,134.173,41.983)
O5': (-1.045,130.706,43.486)
O3': (-4.324,130.272,41.554)
OP1: (-5.077,128.609,39.853)
OP2: (-2.676,129.500,39.815)
C3': (-5.637,132.296,36.747)
C1': (-4.976,134.430,37.456)
C5': (-5.940,131.382,39.130)
O6: (0.786,135.587,36.253)
O4': (-5.360,133.668,38.590)
C8: (-2.619,133.637,38.001)
C2: (-2.306,137.082,35.333)
C6: (-0.440,135.760,36.216)
C5: (-1.461,135.015,36.866)
C4: (-2.773,135.383,36.672)
P: (-4.123,129.729,40.051)
C4': (-6.133,132.519,38.160)
C2': (-5.547,133.718,36.230)
O2': (-6.814,134.250,35.904)
N1: (-0.970,136.798,35.456)
N2: (-2.622,138.123,34.555)
N3: (-3.263,136.396,35.928)
N7: (-1.377,133.916,37.710)
N9: (-3.517,134.480,37.393)
O5': (-4.576,130.947,39.133)
O3': (-6.506,131.505,35.961)
Image (generated by PyMOL):
PyMOL image
show in jmol