Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A43:A44
Extra
PDB:
ATOM 1 O3' C A 42 -5.409 13.471 -5.412 1.00 1.00 O
ATOM 2 P A A 43 -4.558 13.103 -4.111 1.00 1.00 P
ATOM 3 OP1 A A 43 -5.439 13.172 -2.900 1.00 1.00 O
ATOM 4 OP2 A A 43 -3.479 14.123 -4.096 1.00 1.00 O
ATOM 5 O5' A A 43 -4.076 11.594 -4.365 1.00 1.00 O
ATOM 6 C5' A A 43 -4.975 10.513 -4.036 1.00 1.00 C
ATOM 7 C4' A A 43 -4.323 9.221 -4.470 1.00 1.00 C
ATOM 8 O4' A A 43 -3.907 9.268 -5.831 1.00 1.00 O
ATOM 9 C3' A A 43 -3.027 8.894 -3.708 1.00 1.00 C
ATOM 10 O3' A A 43 -3.274 8.398 -2.407 1.00 1.00 O
ATOM 11 C2' A A 43 -2.394 7.861 -4.649 1.00 1.00 C
ATOM 12 O2' A A 43 -3.057 6.630 -4.380 1.00 1.00 O
ATOM 13 C1' A A 43 -2.744 8.452 -6.010 1.00 1.00 C
ATOM 14 N9 A A 43 -1.604 9.214 -6.533 1.00 1.00 N
ATOM 15 C8 A A 43 -1.387 10.567 -6.429 1.00 1.00 C
ATOM 16 N7 A A 43 -0.277 10.975 -6.997 1.00 1.00 N
ATOM 17 C5 A A 43 0.277 9.812 -7.505 1.00 1.00 C
ATOM 18 C6 A A 43 1.477 9.588 -8.222 1.00 1.00 C
ATOM 19 N6 A A 43 2.334 10.540 -8.551 1.00 1.00 N
ATOM 20 N1 A A 43 1.706 8.289 -8.581 1.00 1.00 N
ATOM 21 C2 A A 43 0.832 7.296 -8.252 1.00 1.00 C
ATOM 22 N3 A A 43 -0.308 7.439 -7.580 1.00 1.00 N
ATOM 23 C4 A A 43 -0.525 8.724 -7.236 1.00 1.00 C
ATOM 24 P G A 44 -2.563 9.051 -1.121 1.00 1.00 P
ATOM 25 OP1 G A 44 -3.419 8.935 0.105 1.00 1.00 O
ATOM 26 OP2 G A 44 -2.339 10.465 -1.525 1.00 1.00 O
ATOM 27 O5' G A 44 -1.248 8.153 -0.987 1.00 1.00 O
TER
ATOM 1 O3' A B 43 -3.274 8.398 -2.407 1.00 1.00 O
ATOM 2 P G B 44 -2.563 9.051 -1.121 1.00 1.00 P
ATOM 3 OP1 G B 44 -3.419 8.935 0.105 1.00 1.00 O
ATOM 4 OP2 G B 44 -2.339 10.465 -1.525 1.00 1.00 O
ATOM 5 O5' G B 44 -1.248 8.153 -0.987 1.00 1.00 O
ATOM 6 C5' G B 44 -1.465 6.746 -1.286 1.00 1.00 C
ATOM 7 C4' G B 44 -0.211 6.290 -1.988 1.00 1.00 C
ATOM 8 O4' G B 44 -0.133 6.861 -3.289 1.00 1.00 O
ATOM 9 C3' G B 44 1.098 6.732 -1.331 1.00 1.00 C
ATOM 10 O3' G B 44 1.393 5.943 -0.194 1.00 1.00 O
ATOM 11 C2' G B 44 2.105 6.569 -2.467 1.00 1.00 C
ATOM 12 O2' G B 44 2.466 5.222 -2.586 1.00 1.00 O
ATOM 13 C1' G B 44 1.224 7.045 -3.663 1.00 1.00 C
ATOM 14 N9 G B 44 1.689 8.411 -3.962 1.00 1.00 N
ATOM 15 C8 G B 44 1.236 9.636 -3.588 1.00 1.00 C
ATOM 16 N7 G B 44 1.942 10.628 -4.081 1.00 1.00 N
ATOM 17 C5 G B 44 2.931 10.009 -4.829 1.00 1.00 C
ATOM 18 C6 G B 44 4.004 10.526 -5.606 1.00 1.00 C
ATOM 19 O6 G B 44 4.294 11.716 -5.786 1.00 1.00 O
ATOM 20 N1 G B 44 4.782 9.581 -6.219 1.00 1.00 N
ATOM 21 C2 G B 44 4.535 8.248 -6.085 1.00 1.00 C
ATOM 22 N2 G B 44 5.373 7.432 -6.728 1.00 1.00 N
ATOM 23 N3 G B 44 3.552 7.704 -5.367 1.00 1.00 N
ATOM 24 C4 G B 44 2.792 8.643 -4.769 1.00 1.00 C
ATOM 25 P A B 45 1.598 6.535 1.271 1.00 1.00 P
ATOM 26 OP1 A B 45 0.766 5.787 2.257 1.00 1.00 O
ATOM 27 OP2 A B 45 1.176 7.956 1.121 1.00 1.00 O
ATOM 28 O5' A B 45 3.154 6.365 1.495 1.00 1.00 O
TER
ATOM 2 P A A 43 -4.558 13.103 -4.111 1.00 1.00 P
ATOM 3 OP1 A A 43 -5.439 13.172 -2.900 1.00 1.00 O
ATOM 4 OP2 A A 43 -3.479 14.123 -4.096 1.00 1.00 O
ATOM 5 O5' A A 43 -4.076 11.594 -4.365 1.00 1.00 O
ATOM 6 C5' A A 43 -4.975 10.513 -4.036 1.00 1.00 C
ATOM 7 C4' A A 43 -4.323 9.221 -4.470 1.00 1.00 C
ATOM 8 O4' A A 43 -3.907 9.268 -5.831 1.00 1.00 O
ATOM 9 C3' A A 43 -3.027 8.894 -3.708 1.00 1.00 C
ATOM 10 O3' A A 43 -3.274 8.398 -2.407 1.00 1.00 O
ATOM 11 C2' A A 43 -2.394 7.861 -4.649 1.00 1.00 C
ATOM 12 O2' A A 43 -3.057 6.630 -4.380 1.00 1.00 O
ATOM 13 C1' A A 43 -2.744 8.452 -6.010 1.00 1.00 C
ATOM 14 N9 A A 43 -1.604 9.214 -6.533 1.00 1.00 N
ATOM 15 C8 A A 43 -1.387 10.567 -6.429 1.00 1.00 C
ATOM 16 N7 A A 43 -0.277 10.975 -6.997 1.00 1.00 N
ATOM 17 C5 A A 43 0.277 9.812 -7.505 1.00 1.00 C
ATOM 18 C6 A A 43 1.477 9.588 -8.222 1.00 1.00 C
ATOM 19 N6 A A 43 2.334 10.540 -8.551 1.00 1.00 N
ATOM 20 N1 A A 43 1.706 8.289 -8.581 1.00 1.00 N
ATOM 21 C2 A A 43 0.832 7.296 -8.252 1.00 1.00 C
ATOM 22 N3 A A 43 -0.308 7.439 -7.580 1.00 1.00 N
ATOM 23 C4 A A 43 -0.525 8.724 -7.236 1.00 1.00 C
ATOM 24 P G A 44 -2.563 9.051 -1.121 1.00 1.00 P
ATOM 25 OP1 G A 44 -3.419 8.935 0.105 1.00 1.00 O
ATOM 26 OP2 G A 44 -2.339 10.465 -1.525 1.00 1.00 O
ATOM 27 O5' G A 44 -1.248 8.153 -0.987 1.00 1.00 O
TER
ATOM 1 O3' A B 43 -3.274 8.398 -2.407 1.00 1.00 O
ATOM 2 P G B 44 -2.563 9.051 -1.121 1.00 1.00 P
ATOM 3 OP1 G B 44 -3.419 8.935 0.105 1.00 1.00 O
ATOM 4 OP2 G B 44 -2.339 10.465 -1.525 1.00 1.00 O
ATOM 5 O5' G B 44 -1.248 8.153 -0.987 1.00 1.00 O
ATOM 6 C5' G B 44 -1.465 6.746 -1.286 1.00 1.00 C
ATOM 7 C4' G B 44 -0.211 6.290 -1.988 1.00 1.00 C
ATOM 8 O4' G B 44 -0.133 6.861 -3.289 1.00 1.00 O
ATOM 9 C3' G B 44 1.098 6.732 -1.331 1.00 1.00 C
ATOM 10 O3' G B 44 1.393 5.943 -0.194 1.00 1.00 O
ATOM 11 C2' G B 44 2.105 6.569 -2.467 1.00 1.00 C
ATOM 12 O2' G B 44 2.466 5.222 -2.586 1.00 1.00 O
ATOM 13 C1' G B 44 1.224 7.045 -3.663 1.00 1.00 C
ATOM 14 N9 G B 44 1.689 8.411 -3.962 1.00 1.00 N
ATOM 15 C8 G B 44 1.236 9.636 -3.588 1.00 1.00 C
ATOM 16 N7 G B 44 1.942 10.628 -4.081 1.00 1.00 N
ATOM 17 C5 G B 44 2.931 10.009 -4.829 1.00 1.00 C
ATOM 18 C6 G B 44 4.004 10.526 -5.606 1.00 1.00 C
ATOM 19 O6 G B 44 4.294 11.716 -5.786 1.00 1.00 O
ATOM 20 N1 G B 44 4.782 9.581 -6.219 1.00 1.00 N
ATOM 21 C2 G B 44 4.535 8.248 -6.085 1.00 1.00 C
ATOM 22 N2 G B 44 5.373 7.432 -6.728 1.00 1.00 N
ATOM 23 N3 G B 44 3.552 7.704 -5.367 1.00 1.00 N
ATOM 24 C4 G B 44 2.792 8.643 -4.769 1.00 1.00 C
ATOM 25 P A B 45 1.598 6.535 1.271 1.00 1.00 P
ATOM 26 OP1 A B 45 0.766 5.787 2.257 1.00 1.00 O
ATOM 27 OP2 A B 45 1.176 7.956 1.121 1.00 1.00 O
ATOM 28 O5' A B 45 3.154 6.365 1.495 1.00 1.00 O
TER
Atoms:
OP1: (-5.439,13.172,-2.900)
OP2: (-3.479,14.123,-4.096)
C3': (-3.027,8.894,-3.708)
C1': (-2.744,8.452,-6.010)
C5': (-4.975,10.513,-4.036)
O4': (-3.907,9.268,-5.831)
C8: (-1.387,10.567,-6.429)
O2': (-3.057,6.630,-4.380)
C6: (1.477,9.588,-8.222)
C5: (0.277,9.812,-7.505)
C4: (-0.525,8.724,-7.236)
P: (-4.558,13.103,-4.111)
C4': (-4.323,9.221,-4.470)
C2': (-2.394,7.861,-4.649)
C2: (0.832,7.296,-8.252)
N1: (1.706,8.289,-8.581)
N3: (-0.308,7.439,-7.580)
N6: (2.334,10.540,-8.551)
N7: (-0.277,10.975,-6.997)
N9: (-1.604,9.214,-6.533)
O5': (-4.076,11.594,-4.365)
O3': (-3.274,8.398,-2.407)
OP2: (-3.479,14.123,-4.096)
C3': (-3.027,8.894,-3.708)
C1': (-2.744,8.452,-6.010)
C5': (-4.975,10.513,-4.036)
O4': (-3.907,9.268,-5.831)
C8: (-1.387,10.567,-6.429)
O2': (-3.057,6.630,-4.380)
C6: (1.477,9.588,-8.222)
C5: (0.277,9.812,-7.505)
C4: (-0.525,8.724,-7.236)
P: (-4.558,13.103,-4.111)
C4': (-4.323,9.221,-4.470)
C2': (-2.394,7.861,-4.649)
C2: (0.832,7.296,-8.252)
N1: (1.706,8.289,-8.581)
N3: (-0.308,7.439,-7.580)
N6: (2.334,10.540,-8.551)
N7: (-0.277,10.975,-6.997)
N9: (-1.604,9.214,-6.533)
O5': (-4.076,11.594,-4.365)
O3': (-3.274,8.398,-2.407)
OP1: (-3.419,8.935,0.105)
OP2: (-2.339,10.465,-1.525)
C3': (1.098,6.732,-1.331)
C1': (1.224,7.045,-3.663)
C5': (-1.465,6.746,-1.286)
O6: (4.294,11.716,-5.786)
O4': (-0.133,6.861,-3.289)
C8: (1.236,9.636,-3.588)
C2: (4.535,8.248,-6.085)
C6: (4.004,10.526,-5.606)
C5: (2.931,10.009,-4.829)
C4: (2.792,8.643,-4.769)
P: (-2.563,9.051,-1.121)
C4': (-0.211,6.290,-1.988)
C2': (2.105,6.569,-2.467)
O2': (2.466,5.222,-2.586)
N1: (4.782,9.581,-6.219)
N2: (5.373,7.432,-6.728)
N3: (3.552,7.704,-5.367)
N7: (1.942,10.628,-4.081)
N9: (1.689,8.411,-3.962)
O5': (-1.248,8.153,-0.987)
O3': (1.393,5.943,-0.194)
OP2: (-2.339,10.465,-1.525)
C3': (1.098,6.732,-1.331)
C1': (1.224,7.045,-3.663)
C5': (-1.465,6.746,-1.286)
O6: (4.294,11.716,-5.786)
O4': (-0.133,6.861,-3.289)
C8: (1.236,9.636,-3.588)
C2: (4.535,8.248,-6.085)
C6: (4.004,10.526,-5.606)
C5: (2.931,10.009,-4.829)
C4: (2.792,8.643,-4.769)
P: (-2.563,9.051,-1.121)
C4': (-0.211,6.290,-1.988)
C2': (2.105,6.569,-2.467)
O2': (2.466,5.222,-2.586)
N1: (4.782,9.581,-6.219)
N2: (5.373,7.432,-6.728)
N3: (3.552,7.704,-5.367)
N7: (1.942,10.628,-4.081)
N9: (1.689,8.411,-3.962)
O5': (-1.248,8.153,-0.987)
O3': (1.393,5.943,-0.194)
Image (generated by PyMOL):