ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:039:040

Extra

PDB:
ATOM 1 O3' A A 38 63.608 142.718 29.893 1.00 41.44 O
ATOM 2 P A A 39 62.685 143.484 30.955 1.00 44.59 P
ATOM 3 OP1 A A 39 61.290 143.483 30.440 1.00 45.37 O
ATOM 4 OP2 A A 39 63.341 144.777 31.286 1.00 46.47 O
ATOM 5 O5' A A 39 62.768 142.564 32.253 1.00 44.80 O
ATOM 6 C5' A A 39 62.209 141.243 32.259 1.00 39.72 C
ATOM 7 C4' A A 39 62.766 140.440 33.413 1.00 38.78 C
ATOM 8 O4' A A 39 64.185 140.206 33.223 1.00 38.86 O
ATOM 9 C3' A A 39 62.706 141.089 34.782 1.00 37.12 C
ATOM 10 O3' A A 39 61.416 141.006 35.354 1.00 37.27 O
ATOM 11 C2' A A 39 63.730 140.272 35.551 1.00 36.85 C
ATOM 12 O2' A A 39 63.234 139.016 35.949 1.00 34.95 O
ATOM 13 C1' A A 39 64.820 140.088 34.490 1.00 39.01 C
ATOM 14 N9 A A 39 65.837 141.137 34.611 1.00 41.15 N
ATOM 15 C8 A A 39 65.879 142.355 33.977 1.00 40.73 C
ATOM 16 N7 A A 39 66.878 143.113 34.357 1.00 40.39 N
ATOM 17 C5 A A 39 67.546 142.340 35.293 1.00 40.17 C
ATOM 18 C6 A A 39 68.680 142.585 36.083 1.00 40.78 C
ATOM 19 N6 A A 39 69.359 143.729 36.069 1.00 40.67 N
ATOM 20 N1 A A 39 69.094 141.601 36.910 1.00 42.10 N
ATOM 21 C2 A A 39 68.401 140.456 36.939 1.00 41.10 C
ATOM 22 N3 A A 39 67.313 140.111 36.252 1.00 40.14 N
ATOM 23 C4 A A 39 66.931 141.111 35.441 1.00 39.50 C
ATOM 24 P G A 40 60.797 142.281 36.103 1.00 38.50 P
ATOM 25 OP1 G A 40 59.503 141.844 36.678 1.00 40.08 O
ATOM 26 OP2 G A 40 60.834 143.440 35.180 1.00 41.64 O
ATOM 27 O5' G A 40 61.819 142.572 37.289 1.00 40.48 O
TER

ATOM 1 O3' A B 39 61.416 141.006 35.354 1.00 37.27 O
ATOM 2 P G B 40 60.797 142.281 36.103 1.00 38.50 P
ATOM 3 OP1 G B 40 59.503 141.844 36.678 1.00 40.08 O
ATOM 4 OP2 G B 40 60.834 143.440 35.180 1.00 41.64 O
ATOM 5 O5' G B 40 61.819 142.572 37.289 1.00 40.48 O
ATOM 6 C5' G B 40 62.023 141.618 38.338 1.00 37.13 C
ATOM 7 C4' G B 40 63.174 142.039 39.211 1.00 39.05 C
ATOM 8 O4' G B 40 64.391 142.062 38.417 1.00 41.08 O
ATOM 9 C3' G B 40 63.115 143.434 39.814 1.00 40.01 C
ATOM 10 O3' G B 40 62.297 143.518 40.973 1.00 40.38 O
ATOM 11 C2' G B 40 64.579 143.673 40.141 1.00 40.18 C
ATOM 12 O2' G B 40 64.978 142.947 41.286 1.00 40.81 O
ATOM 13 C1' G B 40 65.254 143.087 38.895 1.00 39.64 C
ATOM 14 N9 G B 40 65.390 144.103 37.851 1.00 39.64 N
ATOM 15 C8 G B 40 64.623 144.240 36.717 1.00 40.49 C
ATOM 16 N7 G B 40 64.929 145.297 36.015 1.00 39.38 N
ATOM 17 C5 G B 40 65.973 145.887 36.717 1.00 41.29 C
ATOM 18 C6 G B 40 66.704 147.082 36.458 1.00 40.16 C
ATOM 19 O6 G B 40 66.567 147.885 35.538 1.00 41.20 O
ATOM 20 N1 G B 40 67.673 147.305 37.421 1.00 40.64 N
ATOM 21 C2 G B 40 67.917 146.494 38.499 1.00 40.94 C
ATOM 22 N2 G B 40 68.917 146.879 39.312 1.00 38.82 N
ATOM 23 N3 G B 40 67.238 145.388 38.762 1.00 40.19 N
ATOM 24 C4 G B 40 66.287 145.149 37.838 1.00 40.48 C
ATOM 25 P G B 41 61.486 144.876 41.279 1.00 44.68 P
ATOM 26 OP1 G B 41 60.588 144.600 42.433 1.00 46.28 O
ATOM 27 OP2 G B 41 60.908 145.390 40.012 1.00 42.46 O
ATOM 28 O5' G B 41 62.601 145.917 41.766 1.00 43.04 O
TER

Atoms:
OP1: (61.290,143.483,30.440)
OP2: (63.341,144.777,31.286)
C3': (62.706,141.089,34.782)
C1': (64.820,140.088,34.490)
C5': (62.209,141.243,32.259)
O4': (64.185,140.206,33.223)
C8: (65.879,142.355,33.977)
O2': (63.234,139.016,35.949)
C6: (68.680,142.585,36.083)
C5: (67.546,142.340,35.293)
C4: (66.931,141.111,35.441)
P: (62.685,143.484,30.955)
C4': (62.766,140.440,33.413)
C2': (63.730,140.272,35.551)
C2: (68.401,140.456,36.939)
N1: (69.094,141.601,36.910)
N3: (67.313,140.111,36.252)
N6: (69.359,143.729,36.069)
N7: (66.878,143.113,34.357)
N9: (65.837,141.137,34.611)
O5': (62.768,142.564,32.253)
O3': (61.416,141.006,35.354)
OP1: (59.503,141.844,36.678)
OP2: (60.834,143.440,35.180)
C3': (63.115,143.434,39.814)
C1': (65.254,143.087,38.895)
C5': (62.023,141.618,38.338)
O6: (66.567,147.885,35.538)
O4': (64.391,142.062,38.417)
C8: (64.623,144.240,36.717)
C2: (67.917,146.494,38.499)
C6: (66.704,147.082,36.458)
C5: (65.973,145.887,36.717)
C4: (66.287,145.149,37.838)
P: (60.797,142.281,36.103)
C4': (63.174,142.039,39.211)
C2': (64.579,143.673,40.141)
O2': (64.978,142.947,41.286)
N1: (67.673,147.305,37.421)
N2: (68.917,146.879,39.312)
N3: (67.238,145.388,38.762)
N7: (64.929,145.297,36.015)
N9: (65.390,144.103,37.851)
O5': (61.819,142.572,37.289)
O3': (62.297,143.518,40.973)
Image (generated by PyMOL):
PyMOL image
show in jmol