ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01853:01854

Extra

PDB:
ATOM 1 O3' C A1852 117.631 101.369 82.667 1.00 55.07 O
ATOM 2 P A A1853 117.846 99.787 82.753 1.00 55.68 P
ATOM 3 OP1 A A1853 118.965 99.515 83.700 1.00 53.05 O
ATOM 4 OP2 A A1853 117.920 99.294 81.348 1.00 53.15 O
ATOM 5 O5' A A1853 116.494 99.245 83.394 1.00 53.91 O
ATOM 6 C5' A A1853 116.249 97.839 83.475 1.00 54.16 C
ATOM 7 C4' A A1853 114.869 97.568 84.015 1.00 54.29 C
ATOM 8 O4' A A1853 114.735 98.127 85.349 1.00 55.08 O
ATOM 9 C3' A A1853 113.698 98.179 83.272 1.00 54.04 C
ATOM 10 O3' A A1853 113.372 97.456 82.097 1.00 53.71 O
ATOM 11 C2' A A1853 112.602 98.073 84.320 1.00 55.10 C
ATOM 12 O2' A A1853 112.122 96.751 84.453 1.00 56.08 O
ATOM 13 C1' A A1853 113.374 98.450 85.587 1.00 55.97 C
ATOM 14 N9 A A1853 113.274 99.883 85.856 1.00 57.54 N
ATOM 15 C8 A A1853 114.254 100.842 85.785 1.00 58.21 C
ATOM 16 N7 A A1853 113.825 102.052 86.042 1.00 59.93 N
ATOM 17 C5 A A1853 112.474 101.877 86.309 1.00 60.07 C
ATOM 18 C6 A A1853 111.451 102.780 86.636 1.00 61.04 C
ATOM 19 N6 A A1853 111.632 104.098 86.740 1.00 60.95 N
ATOM 20 N1 A A1853 110.213 102.277 86.847 1.00 61.47 N
ATOM 21 C2 A A1853 110.027 100.957 86.720 1.00 59.20 C
ATOM 22 N3 A A1853 110.905 100.013 86.405 1.00 59.26 N
ATOM 23 C4 A A1853 112.125 100.545 86.212 1.00 58.80 C
ATOM 24 P G A1854 112.616 98.202 80.894 1.00 54.39 P
ATOM 25 OP1 G A1854 112.337 97.196 79.834 1.00 54.99 O
ATOM 26 OP2 G A1854 113.370 99.433 80.544 1.00 56.50 O
ATOM 27 O5' G A1854 111.230 98.639 81.547 1.00 53.29 O
TER

ATOM 1 O3' A B1853 113.372 97.456 82.097 1.00 53.71 O
ATOM 2 P G B1854 112.616 98.202 80.894 1.00 54.39 P
ATOM 3 OP1 G B1854 112.337 97.196 79.834 1.00 54.99 O
ATOM 4 OP2 G B1854 113.370 99.433 80.544 1.00 56.50 O
ATOM 5 O5' G B1854 111.230 98.639 81.547 1.00 53.29 O
ATOM 6 C5' G B1854 110.194 97.670 81.806 1.00 48.60 C
ATOM 7 C4' G B1854 108.881 98.369 82.048 1.00 45.91 C
ATOM 8 O4' G B1854 108.965 99.132 83.276 1.00 46.95 O
ATOM 9 C3' G B1854 108.507 99.390 80.991 1.00 45.12 C
ATOM 10 O3' G B1854 107.864 98.777 79.887 1.00 45.14 O
ATOM 11 C2' G B1854 107.592 100.330 81.757 1.00 46.30 C
ATOM 12 O2' G B1854 106.285 99.817 81.908 1.00 45.83 O
ATOM 13 C1' G B1854 108.285 100.365 83.121 1.00 47.11 C
ATOM 14 N9 G B1854 109.270 101.437 83.238 1.00 47.54 N
ATOM 15 C8 G B1854 110.637 101.302 83.303 1.00 46.83 C
ATOM 16 N7 G B1854 111.261 102.444 83.392 1.00 47.16 N
ATOM 17 C5 G B1854 110.247 103.392 83.387 1.00 48.37 C
ATOM 18 C6 G B1854 110.314 104.803 83.448 1.00 48.50 C
ATOM 19 O6 G B1854 111.316 105.523 83.511 1.00 50.13 O
ATOM 20 N1 G B1854 109.048 105.378 83.417 1.00 48.35 N
ATOM 21 C2 G B1854 107.868 104.684 83.328 1.00 48.24 C
ATOM 22 N2 G B1854 106.755 105.424 83.301 1.00 46.20 N
ATOM 23 N3 G B1854 107.790 103.364 83.266 1.00 47.59 N
ATOM 24 C4 G B1854 109.010 102.786 83.298 1.00 47.93 C
ATOM 25 P U B1855 108.071 99.379 78.417 1.00 45.97 P
ATOM 26 OP1 U B1855 107.231 98.614 77.460 1.00 45.79 O
ATOM 27 OP2 U B1855 109.531 99.509 78.173 1.00 46.09 O
ATOM 28 O5' U B1855 107.482 100.848 78.543 1.00 46.28 O
TER

Atoms:
OP1: (118.965,99.515,83.700)
OP2: (117.920,99.294,81.348)
C3': (113.698,98.179,83.272)
C1': (113.374,98.450,85.587)
C5': (116.249,97.839,83.475)
O4': (114.735,98.127,85.349)
C8: (114.254,100.842,85.785)
O2': (112.122,96.751,84.453)
C6: (111.451,102.780,86.636)
C5: (112.474,101.877,86.309)
C4: (112.125,100.545,86.212)
P: (117.846,99.787,82.753)
C4': (114.869,97.568,84.015)
C2': (112.602,98.073,84.320)
C2: (110.027,100.957,86.720)
N1: (110.213,102.277,86.847)
N3: (110.905,100.013,86.405)
N6: (111.632,104.098,86.740)
N7: (113.825,102.052,86.042)
N9: (113.274,99.883,85.856)
O5': (116.494,99.245,83.394)
O3': (113.372,97.456,82.097)
OP1: (112.337,97.196,79.834)
OP2: (113.370,99.433,80.544)
C3': (108.507,99.390,80.991)
C1': (108.285,100.365,83.121)
C5': (110.194,97.670,81.806)
O6: (111.316,105.523,83.511)
O4': (108.965,99.132,83.276)
C8: (110.637,101.302,83.303)
C2: (107.868,104.684,83.328)
C6: (110.314,104.803,83.448)
C5: (110.247,103.392,83.387)
C4: (109.010,102.786,83.298)
P: (112.616,98.202,80.894)
C4': (108.881,98.369,82.048)
C2': (107.592,100.330,81.757)
O2': (106.285,99.817,81.908)
N1: (109.048,105.378,83.417)
N2: (106.755,105.424,83.301)
N3: (107.790,103.364,83.266)
N7: (111.261,102.444,83.392)
N9: (109.270,101.437,83.238)
O5': (111.230,98.639,81.547)
O3': (107.864,98.777,79.887)
Image (generated by PyMOL):
PyMOL image
show in jmol