ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01889:01890

Extra

PDB:
ATOM 1 O3' A A1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 2 P A A1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 3 OP1 A A1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 4 OP2 A A1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 5 O5' A A1889 114.838 100.576 58.175 1.00 57.04 O
ATOM 6 C5' A A1889 114.814 101.989 57.891 1.00 54.71 C
ATOM 7 C4' A A1889 113.436 102.546 58.151 1.00 52.91 C
ATOM 8 O4' A A1889 112.493 101.871 57.279 1.00 53.55 O
ATOM 9 C3' A A1889 112.885 102.288 59.543 1.00 52.71 C
ATOM 10 O3' A A1889 113.342 103.218 60.509 1.00 51.94 O
ATOM 11 C2' A A1889 111.385 102.365 59.317 1.00 52.55 C
ATOM 12 O2' A A1889 110.906 103.690 59.210 1.00 52.20 O
ATOM 13 C1' A A1889 111.266 101.664 57.965 1.00 53.04 C
ATOM 14 N9 A A1889 111.060 100.223 58.112 1.00 52.76 N
ATOM 15 C8 A A1889 112.005 99.227 58.172 1.00 51.91 C
ATOM 16 N7 A A1889 111.501 98.027 58.314 1.00 50.01 N
ATOM 17 C5 A A1889 110.133 98.243 58.349 1.00 51.91 C
ATOM 18 C6 A A1889 109.045 97.371 58.474 1.00 51.52 C
ATOM 19 N6 A A1889 109.163 96.050 58.597 1.00 52.59 N
ATOM 20 N1 A A1889 107.808 97.909 58.465 1.00 51.63 N
ATOM 21 C2 A A1889 107.685 99.236 58.339 1.00 51.08 C
ATOM 22 N3 A A1889 108.629 100.159 58.215 1.00 51.73 N
ATOM 23 C4 A A1889 109.847 99.591 58.226 1.00 52.99 C
ATOM 24 P G A1890 113.697 102.703 61.989 1.00 53.90 P
ATOM 25 OP1 G A1890 113.890 103.901 62.849 1.00 52.51 O
ATOM 26 OP2 G A1890 114.778 101.692 61.888 1.00 54.05 O
ATOM 27 O5' G A1890 112.377 101.947 62.457 1.00 52.86 O
TER

ATOM 1 O3' A B1889 113.342 103.218 60.509 1.00 51.94 O
ATOM 2 P G B1890 113.697 102.703 61.989 1.00 53.90 P
ATOM 3 OP1 G B1890 113.890 103.901 62.849 1.00 52.51 O
ATOM 4 OP2 G B1890 114.778 101.692 61.888 1.00 54.05 O
ATOM 5 O5' G B1890 112.377 101.947 62.457 1.00 52.86 O
ATOM 6 C5' G B1890 111.152 102.664 62.669 1.00 53.45 C
ATOM 7 C4' G B1890 110.052 101.711 63.059 1.00 54.69 C
ATOM 8 O4' G B1890 109.757 100.825 61.947 1.00 56.24 O
ATOM 9 C3' G B1890 110.395 100.767 64.193 1.00 55.10 C
ATOM 10 O3' G B1890 110.275 101.385 65.459 1.00 55.48 O
ATOM 11 C2' G B1890 109.420 99.621 63.966 1.00 55.60 C
ATOM 12 O2' G B1890 108.106 99.869 64.426 1.00 55.37 O
ATOM 13 C1' G B1890 109.432 99.534 62.438 1.00 56.30 C
ATOM 14 N9 G B1890 110.456 98.604 61.978 1.00 57.40 N
ATOM 15 C8 G B1890 111.687 98.912 61.453 1.00 56.71 C
ATOM 16 N7 G B1890 112.402 97.857 61.179 1.00 58.69 N
ATOM 17 C5 G B1890 111.590 96.788 61.535 1.00 58.76 C
ATOM 18 C6 G B1890 111.827 95.393 61.472 1.00 59.99 C
ATOM 19 O6 G B1890 112.839 94.797 61.076 1.00 61.89 O
ATOM 20 N1 G B1890 110.734 94.670 61.933 1.00 60.94 N
ATOM 21 C2 G B1890 109.563 95.214 62.400 1.00 60.78 C
ATOM 22 N2 G B1890 108.626 94.348 62.812 1.00 61.07 N
ATOM 23 N3 G B1890 109.330 96.511 62.461 1.00 59.76 N
ATOM 24 C4 G B1890 110.381 97.234 62.017 1.00 58.39 C
ATOM 25 P G B1891 111.270 100.958 66.641 1.00 57.65 P
ATOM 26 OP1 G B1891 110.995 101.855 67.796 1.00 57.85 O
ATOM 27 OP2 G B1891 112.655 100.866 66.104 1.00 57.18 O
ATOM 28 O5' G B1891 110.789 99.480 66.992 1.00 57.67 O
TER

Atoms:
OP1: (117.313,100.266,57.914)
OP2: (115.720,98.257,58.079)
C3': (112.885,102.288,59.543)
C1': (111.266,101.664,57.965)
C5': (114.814,101.989,57.891)
O4': (112.493,101.871,57.279)
C8: (112.005,99.227,58.172)
O2': (110.906,103.690,59.210)
C6: (109.045,97.371,58.474)
C5: (110.133,98.243,58.349)
C4: (109.847,99.591,58.226)
P: (115.997,99.639,57.611)
C4': (113.436,102.546,58.151)
C2': (111.385,102.365,59.317)
C2: (107.685,99.236,58.339)
N1: (107.808,97.909,58.465)
N3: (108.629,100.159,58.215)
N6: (109.163,96.050,58.597)
N7: (111.501,98.027,58.314)
N9: (111.060,100.223,58.112)
O5': (114.838,100.576,58.175)
O3': (113.342,103.218,60.509)
OP1: (113.890,103.901,62.849)
OP2: (114.778,101.692,61.888)
C3': (110.395,100.767,64.193)
C1': (109.432,99.534,62.438)
C5': (111.152,102.664,62.669)
O6: (112.839,94.797,61.076)
O4': (109.757,100.825,61.947)
C8: (111.687,98.912,61.453)
C2: (109.563,95.214,62.400)
C6: (111.827,95.393,61.472)
C5: (111.590,96.788,61.535)
C4: (110.381,97.234,62.017)
P: (113.697,102.703,61.989)
C4': (110.052,101.711,63.059)
C2': (109.420,99.621,63.966)
O2': (108.106,99.869,64.426)
N1: (110.734,94.670,61.933)
N2: (108.626,94.348,62.812)
N3: (109.330,96.511,62.461)
N7: (112.402,97.857,61.179)
N9: (110.456,98.604,61.978)
O5': (112.377,101.947,62.457)
O3': (110.275,101.385,65.459)
Image (generated by PyMOL):
PyMOL image
show in jmol