Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:A7:A6
Extra
PDB:
ATOM 1 O3' C A 6 94.054 38.121 30.388 1.00113.08 O
ATOM 2 P U A 7 92.923 37.095 29.897 1.00113.28 P
ATOM 3 OP1 U A 7 92.145 37.731 28.804 1.00113.34 O
ATOM 4 OP2 U A 7 92.222 36.606 31.112 1.00114.63 O
ATOM 5 O5' U A 7 93.753 35.888 29.278 1.00107.62 O
ATOM 6 C5' U A 7 94.573 36.086 28.135 1.00107.78 C
ATOM 7 C4' U A 7 95.426 34.867 27.896 1.00109.50 C
ATOM 8 O4' U A 7 96.388 34.727 28.975 1.00107.81 O
ATOM 9 C3' U A 7 94.666 33.555 27.912 1.00109.57 C
ATOM 10 O3' U A 7 94.051 33.299 26.660 1.00114.38 O
ATOM 11 C2' U A 7 95.767 32.559 28.243 1.00106.55 C
ATOM 12 O2' U A 7 96.572 32.247 27.124 1.00101.08 O
ATOM 13 C1' U A 7 96.578 33.352 29.271 1.00105.53 C
ATOM 14 N1 U A 7 96.127 33.118 30.650 1.00105.29 N
ATOM 15 C2 U A 7 96.621 32.009 31.310 1.00104.43 C
ATOM 16 O2 U A 7 97.413 31.234 30.799 1.00103.78 O
ATOM 17 N3 U A 7 96.154 31.841 32.591 1.00104.19 N
ATOM 18 C4 U A 7 95.262 32.652 33.264 1.00104.65 C
ATOM 19 O4 U A 7 94.935 32.368 34.418 1.00104.15 O
ATOM 20 C5 U A 7 94.799 33.780 32.514 1.00104.99 C
ATOM 21 C6 U A 7 95.237 33.969 31.264 1.00105.32 C
ATOM 22 P G A 8 92.668 32.486 26.615 1.00117.55 P
ATOM 23 OP1 G A 8 92.179 32.468 25.213 1.00116.60 O
ATOM 24 OP2 G A 8 91.802 33.039 27.690 1.00112.50 O
ATOM 25 O5' G A 8 93.100 31.006 27.013 1.00115.33 O
TER
ATOM 1 O3' C B 5 92.822 40.379 35.910 1.00129.37 O
ATOM 2 P C B 6 92.220 39.316 34.863 1.00125.55 P
ATOM 3 OP1 C B 6 91.246 40.020 33.990 1.00125.92 O
ATOM 4 OP2 C B 6 91.785 38.125 35.633 1.00125.87 O
ATOM 5 O5' C B 6 93.471 38.900 33.970 1.00120.17 O
ATOM 6 C5' C B 6 94.077 39.836 33.085 1.00113.24 C
ATOM 7 C4' C B 6 95.157 39.165 32.270 1.00111.44 C
ATOM 8 O4' C B 6 96.263 38.781 33.126 1.00110.06 O
ATOM 9 C3' C B 6 94.753 37.866 31.599 1.00111.30 C
ATOM 10 O3' C B 6 94.054 38.121 30.388 1.00113.08 O
ATOM 11 C2' C B 6 96.101 37.198 31.354 1.00108.83 C
ATOM 12 O2' C B 6 96.764 37.683 30.205 1.00106.04 O
ATOM 13 C1' C B 6 96.879 37.612 32.605 1.00107.80 C
ATOM 14 N1 C B 6 96.897 36.581 33.656 1.00105.04 N
ATOM 15 C2 C B 6 97.720 35.462 33.488 1.00103.49 C
ATOM 16 O2 C B 6 98.401 35.367 32.456 1.00101.61 O
ATOM 17 N3 C B 6 97.752 34.515 34.452 1.00103.02 N
ATOM 18 C4 C B 6 97.002 34.653 35.548 1.00103.96 C
ATOM 19 N4 C B 6 97.065 33.696 36.475 1.00103.67 N
ATOM 20 C5 C B 6 96.152 35.781 35.742 1.00104.82 C
ATOM 21 C6 C B 6 96.131 36.712 34.780 1.00105.17 C
ATOM 22 P U B 7 92.923 37.095 29.897 1.00113.28 P
ATOM 23 OP1 U B 7 92.145 37.731 28.804 1.00113.34 O
ATOM 24 OP2 U B 7 92.222 36.606 31.112 1.00114.63 O
ATOM 25 O5' U B 7 93.753 35.888 29.278 1.00107.62 O
TER
ATOM 2 P U A 7 92.923 37.095 29.897 1.00113.28 P
ATOM 3 OP1 U A 7 92.145 37.731 28.804 1.00113.34 O
ATOM 4 OP2 U A 7 92.222 36.606 31.112 1.00114.63 O
ATOM 5 O5' U A 7 93.753 35.888 29.278 1.00107.62 O
ATOM 6 C5' U A 7 94.573 36.086 28.135 1.00107.78 C
ATOM 7 C4' U A 7 95.426 34.867 27.896 1.00109.50 C
ATOM 8 O4' U A 7 96.388 34.727 28.975 1.00107.81 O
ATOM 9 C3' U A 7 94.666 33.555 27.912 1.00109.57 C
ATOM 10 O3' U A 7 94.051 33.299 26.660 1.00114.38 O
ATOM 11 C2' U A 7 95.767 32.559 28.243 1.00106.55 C
ATOM 12 O2' U A 7 96.572 32.247 27.124 1.00101.08 O
ATOM 13 C1' U A 7 96.578 33.352 29.271 1.00105.53 C
ATOM 14 N1 U A 7 96.127 33.118 30.650 1.00105.29 N
ATOM 15 C2 U A 7 96.621 32.009 31.310 1.00104.43 C
ATOM 16 O2 U A 7 97.413 31.234 30.799 1.00103.78 O
ATOM 17 N3 U A 7 96.154 31.841 32.591 1.00104.19 N
ATOM 18 C4 U A 7 95.262 32.652 33.264 1.00104.65 C
ATOM 19 O4 U A 7 94.935 32.368 34.418 1.00104.15 O
ATOM 20 C5 U A 7 94.799 33.780 32.514 1.00104.99 C
ATOM 21 C6 U A 7 95.237 33.969 31.264 1.00105.32 C
ATOM 22 P G A 8 92.668 32.486 26.615 1.00117.55 P
ATOM 23 OP1 G A 8 92.179 32.468 25.213 1.00116.60 O
ATOM 24 OP2 G A 8 91.802 33.039 27.690 1.00112.50 O
ATOM 25 O5' G A 8 93.100 31.006 27.013 1.00115.33 O
TER
ATOM 1 O3' C B 5 92.822 40.379 35.910 1.00129.37 O
ATOM 2 P C B 6 92.220 39.316 34.863 1.00125.55 P
ATOM 3 OP1 C B 6 91.246 40.020 33.990 1.00125.92 O
ATOM 4 OP2 C B 6 91.785 38.125 35.633 1.00125.87 O
ATOM 5 O5' C B 6 93.471 38.900 33.970 1.00120.17 O
ATOM 6 C5' C B 6 94.077 39.836 33.085 1.00113.24 C
ATOM 7 C4' C B 6 95.157 39.165 32.270 1.00111.44 C
ATOM 8 O4' C B 6 96.263 38.781 33.126 1.00110.06 O
ATOM 9 C3' C B 6 94.753 37.866 31.599 1.00111.30 C
ATOM 10 O3' C B 6 94.054 38.121 30.388 1.00113.08 O
ATOM 11 C2' C B 6 96.101 37.198 31.354 1.00108.83 C
ATOM 12 O2' C B 6 96.764 37.683 30.205 1.00106.04 O
ATOM 13 C1' C B 6 96.879 37.612 32.605 1.00107.80 C
ATOM 14 N1 C B 6 96.897 36.581 33.656 1.00105.04 N
ATOM 15 C2 C B 6 97.720 35.462 33.488 1.00103.49 C
ATOM 16 O2 C B 6 98.401 35.367 32.456 1.00101.61 O
ATOM 17 N3 C B 6 97.752 34.515 34.452 1.00103.02 N
ATOM 18 C4 C B 6 97.002 34.653 35.548 1.00103.96 C
ATOM 19 N4 C B 6 97.065 33.696 36.475 1.00103.67 N
ATOM 20 C5 C B 6 96.152 35.781 35.742 1.00104.82 C
ATOM 21 C6 C B 6 96.131 36.712 34.780 1.00105.17 C
ATOM 22 P U B 7 92.923 37.095 29.897 1.00113.28 P
ATOM 23 OP1 U B 7 92.145 37.731 28.804 1.00113.34 O
ATOM 24 OP2 U B 7 92.222 36.606 31.112 1.00114.63 O
ATOM 25 O5' U B 7 93.753 35.888 29.278 1.00107.62 O
TER
Atoms:
C4: (95.262,32.652,33.264)
N3: (96.154,31.841,32.591)
OP1: (92.145,37.731,28.804)
OP2: (92.222,36.606,31.112)
C2: (96.621,32.009,31.310)
C1': (96.578,33.352,29.271)
C3': (94.666,33.555,27.912)
O5': (93.753,35.888,29.278)
O4': (96.388,34.727,28.975)
C5': (94.573,36.086,28.135)
P: (92.923,37.095,29.897)
C4': (95.426,34.867,27.896)
C2': (95.767,32.559,28.243)
O2': (96.572,32.247,27.124)
N1: (96.127,33.118,30.650)
O4: (94.935,32.368,34.418)
O2: (97.413,31.234,30.799)
C6: (95.237,33.969,31.264)
C5: (94.799,33.780,32.514)
O3': (94.051,33.299,26.660)
N3: (96.154,31.841,32.591)
OP1: (92.145,37.731,28.804)
OP2: (92.222,36.606,31.112)
C2: (96.621,32.009,31.310)
C1': (96.578,33.352,29.271)
C3': (94.666,33.555,27.912)
O5': (93.753,35.888,29.278)
O4': (96.388,34.727,28.975)
C5': (94.573,36.086,28.135)
P: (92.923,37.095,29.897)
C4': (95.426,34.867,27.896)
C2': (95.767,32.559,28.243)
O2': (96.572,32.247,27.124)
N1: (96.127,33.118,30.650)
O4: (94.935,32.368,34.418)
O2: (97.413,31.234,30.799)
C6: (95.237,33.969,31.264)
C5: (94.799,33.780,32.514)
O3': (94.051,33.299,26.660)
C2: (97.720,35.462,33.488)
OP1: (91.246,40.020,33.990)
OP2: (91.785,38.125,35.633)
C4: (97.002,34.653,35.548)
O5': (93.471,38.900,33.970)
C3': (94.753,37.866,31.599)
C1': (96.879,37.612,32.605)
O4': (96.263,38.781,33.126)
C5': (94.077,39.836,33.085)
P: (92.220,39.316,34.863)
O2: (98.401,35.367,32.456)
C4': (95.157,39.165,32.270)
C2': (96.101,37.198,31.354)
O2': (96.764,37.683,30.205)
N1: (96.897,36.581,33.656)
N3: (97.752,34.515,34.452)
N4: (97.065,33.696,36.475)
C6: (96.131,36.712,34.780)
C5: (96.152,35.781,35.742)
O3': (94.054,38.121,30.388)
OP1: (91.246,40.020,33.990)
OP2: (91.785,38.125,35.633)
C4: (97.002,34.653,35.548)
O5': (93.471,38.900,33.970)
C3': (94.753,37.866,31.599)
C1': (96.879,37.612,32.605)
O4': (96.263,38.781,33.126)
C5': (94.077,39.836,33.085)
P: (92.220,39.316,34.863)
O2: (98.401,35.367,32.456)
C4': (95.157,39.165,32.270)
C2': (96.101,37.198,31.354)
O2': (96.764,37.683,30.205)
N1: (96.897,36.581,33.656)
N3: (97.752,34.515,34.452)
N4: (97.065,33.696,36.475)
C6: (96.131,36.712,34.780)
C5: (96.152,35.781,35.742)
O3': (94.054,38.121,30.388)
Image (generated by PyMOL):