Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCV:0561:0562
Extra
PDB:
ATOM 1 O3' G A 560 -12.929 93.791 127.876 1.00 92.07 O
ATOM 2 P A A 561 -12.440 92.629 128.876 1.00 93.52 P
ATOM 3 OP1 A A 561 -13.387 92.625 130.015 1.00 94.69 O
ATOM 4 OP2 A A 561 -10.986 92.796 129.136 1.00 93.07 O
ATOM 5 O5' A A 561 -12.645 91.285 128.044 1.00 90.91 O
ATOM 6 C5' A A 561 -13.925 90.638 127.988 1.00 89.96 C
ATOM 7 C4' A A 561 -13.756 89.207 127.554 1.00 90.88 C
ATOM 8 O4' A A 561 -13.212 89.192 126.206 1.00 91.83 O
ATOM 9 C3' A A 561 -12.745 88.402 128.358 1.00 92.31 C
ATOM 10 O3' A A 561 -13.260 87.901 129.591 1.00 93.02 O
ATOM 11 C2' A A 561 -12.354 87.310 127.371 1.00 92.12 C
ATOM 12 O2' A A 561 -13.307 86.270 127.266 1.00 91.39 O
ATOM 13 C1' A A 561 -12.298 88.109 126.067 1.00 91.88 C
ATOM 14 N9 A A 561 -10.955 88.658 125.852 1.00 91.00 N
ATOM 15 C8 A A 561 -10.456 89.864 126.290 1.00 89.98 C
ATOM 16 N7 A A 561 -9.192 90.052 125.996 1.00 89.04 N
ATOM 17 C5 A A 561 -8.836 88.901 125.305 1.00 89.07 C
ATOM 18 C6 A A 561 -7.625 88.482 124.728 1.00 88.23 C
ATOM 19 N6 A A 561 -6.503 89.201 124.760 1.00 87.56 N
ATOM 20 N1 A A 561 -7.606 87.281 124.110 1.00 88.26 N
ATOM 21 C2 A A 561 -8.732 86.558 124.079 1.00 88.57 C
ATOM 22 N3 A A 561 -9.931 86.841 124.586 1.00 89.53 N
ATOM 23 C4 A A 561 -9.916 88.041 125.195 1.00 89.96 C
ATOM 24 P G A 562 -12.244 87.529 130.789 1.00 91.81 P
ATOM 25 OP1 G A 562 -13.073 87.101 131.939 1.00 93.01 O
ATOM 26 OP2 G A 562 -11.264 88.631 130.967 1.00 92.54 O
ATOM 27 O5' G A 562 -11.467 86.253 130.241 1.00 88.95 O
TER
ATOM 1 O3' A B 561 -13.260 87.901 129.591 1.00 93.02 O
ATOM 2 P G B 562 -12.244 87.529 130.789 1.00 91.81 P
ATOM 3 OP1 G B 562 -13.073 87.101 131.939 1.00 93.01 O
ATOM 4 OP2 G B 562 -11.264 88.631 130.967 1.00 92.54 O
ATOM 5 O5' G B 562 -11.467 86.253 130.241 1.00 88.95 O
ATOM 6 C5' G B 562 -12.184 85.062 129.902 1.00 86.44 C
ATOM 7 C4' G B 562 -11.267 84.068 129.242 1.00 85.07 C
ATOM 8 O4' G B 562 -10.821 84.590 127.963 1.00 84.78 O
ATOM 9 C3' G B 562 -9.959 83.787 129.954 1.00 84.64 C
ATOM 10 O3' G B 562 -10.074 82.930 131.070 1.00 85.41 O
ATOM 11 C2' G B 562 -9.140 83.170 128.837 1.00 84.38 C
ATOM 12 O2' G B 562 -9.505 81.836 128.556 1.00 84.33 O
ATOM 13 C1' G B 562 -9.524 84.083 127.675 1.00 84.50 C
ATOM 14 N9 G B 562 -8.579 85.194 127.624 1.00 84.52 N
ATOM 15 C8 G B 562 -8.709 86.441 128.192 1.00 84.07 C
ATOM 16 N7 G B 562 -7.647 87.186 128.035 1.00 83.88 N
ATOM 17 C5 G B 562 -6.773 86.389 127.306 1.00 84.19 C
ATOM 18 C6 G B 562 -5.460 86.647 126.844 1.00 83.79 C
ATOM 19 O6 G B 562 -4.777 87.665 126.996 1.00 85.41 O
ATOM 20 N1 G B 562 -4.941 85.563 126.142 1.00 82.54 N
ATOM 21 C2 G B 562 -5.598 84.381 125.917 1.00 82.47 C
ATOM 22 N2 G B 562 -4.936 83.452 125.220 1.00 81.97 N
ATOM 23 N3 G B 562 -6.818 84.126 126.344 1.00 83.76 N
ATOM 24 C4 G B 562 -7.342 85.166 127.029 1.00 84.51 C
ATOM 25 P A B 563 -8.945 82.982 132.209 1.00 85.88 P
ATOM 26 OP1 A B 563 -9.316 82.020 133.272 1.00 87.37 O
ATOM 27 OP2 A B 563 -8.707 84.407 132.555 1.00 85.47 O
ATOM 28 O5' A B 563 -7.658 82.406 131.476 1.00 85.00 O
TER
ATOM 2 P A A 561 -12.440 92.629 128.876 1.00 93.52 P
ATOM 3 OP1 A A 561 -13.387 92.625 130.015 1.00 94.69 O
ATOM 4 OP2 A A 561 -10.986 92.796 129.136 1.00 93.07 O
ATOM 5 O5' A A 561 -12.645 91.285 128.044 1.00 90.91 O
ATOM 6 C5' A A 561 -13.925 90.638 127.988 1.00 89.96 C
ATOM 7 C4' A A 561 -13.756 89.207 127.554 1.00 90.88 C
ATOM 8 O4' A A 561 -13.212 89.192 126.206 1.00 91.83 O
ATOM 9 C3' A A 561 -12.745 88.402 128.358 1.00 92.31 C
ATOM 10 O3' A A 561 -13.260 87.901 129.591 1.00 93.02 O
ATOM 11 C2' A A 561 -12.354 87.310 127.371 1.00 92.12 C
ATOM 12 O2' A A 561 -13.307 86.270 127.266 1.00 91.39 O
ATOM 13 C1' A A 561 -12.298 88.109 126.067 1.00 91.88 C
ATOM 14 N9 A A 561 -10.955 88.658 125.852 1.00 91.00 N
ATOM 15 C8 A A 561 -10.456 89.864 126.290 1.00 89.98 C
ATOM 16 N7 A A 561 -9.192 90.052 125.996 1.00 89.04 N
ATOM 17 C5 A A 561 -8.836 88.901 125.305 1.00 89.07 C
ATOM 18 C6 A A 561 -7.625 88.482 124.728 1.00 88.23 C
ATOM 19 N6 A A 561 -6.503 89.201 124.760 1.00 87.56 N
ATOM 20 N1 A A 561 -7.606 87.281 124.110 1.00 88.26 N
ATOM 21 C2 A A 561 -8.732 86.558 124.079 1.00 88.57 C
ATOM 22 N3 A A 561 -9.931 86.841 124.586 1.00 89.53 N
ATOM 23 C4 A A 561 -9.916 88.041 125.195 1.00 89.96 C
ATOM 24 P G A 562 -12.244 87.529 130.789 1.00 91.81 P
ATOM 25 OP1 G A 562 -13.073 87.101 131.939 1.00 93.01 O
ATOM 26 OP2 G A 562 -11.264 88.631 130.967 1.00 92.54 O
ATOM 27 O5' G A 562 -11.467 86.253 130.241 1.00 88.95 O
TER
ATOM 1 O3' A B 561 -13.260 87.901 129.591 1.00 93.02 O
ATOM 2 P G B 562 -12.244 87.529 130.789 1.00 91.81 P
ATOM 3 OP1 G B 562 -13.073 87.101 131.939 1.00 93.01 O
ATOM 4 OP2 G B 562 -11.264 88.631 130.967 1.00 92.54 O
ATOM 5 O5' G B 562 -11.467 86.253 130.241 1.00 88.95 O
ATOM 6 C5' G B 562 -12.184 85.062 129.902 1.00 86.44 C
ATOM 7 C4' G B 562 -11.267 84.068 129.242 1.00 85.07 C
ATOM 8 O4' G B 562 -10.821 84.590 127.963 1.00 84.78 O
ATOM 9 C3' G B 562 -9.959 83.787 129.954 1.00 84.64 C
ATOM 10 O3' G B 562 -10.074 82.930 131.070 1.00 85.41 O
ATOM 11 C2' G B 562 -9.140 83.170 128.837 1.00 84.38 C
ATOM 12 O2' G B 562 -9.505 81.836 128.556 1.00 84.33 O
ATOM 13 C1' G B 562 -9.524 84.083 127.675 1.00 84.50 C
ATOM 14 N9 G B 562 -8.579 85.194 127.624 1.00 84.52 N
ATOM 15 C8 G B 562 -8.709 86.441 128.192 1.00 84.07 C
ATOM 16 N7 G B 562 -7.647 87.186 128.035 1.00 83.88 N
ATOM 17 C5 G B 562 -6.773 86.389 127.306 1.00 84.19 C
ATOM 18 C6 G B 562 -5.460 86.647 126.844 1.00 83.79 C
ATOM 19 O6 G B 562 -4.777 87.665 126.996 1.00 85.41 O
ATOM 20 N1 G B 562 -4.941 85.563 126.142 1.00 82.54 N
ATOM 21 C2 G B 562 -5.598 84.381 125.917 1.00 82.47 C
ATOM 22 N2 G B 562 -4.936 83.452 125.220 1.00 81.97 N
ATOM 23 N3 G B 562 -6.818 84.126 126.344 1.00 83.76 N
ATOM 24 C4 G B 562 -7.342 85.166 127.029 1.00 84.51 C
ATOM 25 P A B 563 -8.945 82.982 132.209 1.00 85.88 P
ATOM 26 OP1 A B 563 -9.316 82.020 133.272 1.00 87.37 O
ATOM 27 OP2 A B 563 -8.707 84.407 132.555 1.00 85.47 O
ATOM 28 O5' A B 563 -7.658 82.406 131.476 1.00 85.00 O
TER
Atoms:
OP1: (-13.387,92.625,130.015)
OP2: (-10.986,92.796,129.136)
C3': (-12.745,88.402,128.358)
C1': (-12.298,88.109,126.067)
C5': (-13.925,90.638,127.988)
O4': (-13.212,89.192,126.206)
C8: (-10.456,89.864,126.290)
O2': (-13.307,86.270,127.266)
C6: (-7.625,88.482,124.728)
C5: (-8.836,88.901,125.305)
C4: (-9.916,88.041,125.195)
P: (-12.440,92.629,128.876)
C4': (-13.756,89.207,127.554)
C2': (-12.354,87.310,127.371)
C2: (-8.732,86.558,124.079)
N1: (-7.606,87.281,124.110)
N3: (-9.931,86.841,124.586)
N6: (-6.503,89.201,124.760)
N7: (-9.192,90.052,125.996)
N9: (-10.955,88.658,125.852)
O5': (-12.645,91.285,128.044)
O3': (-13.260,87.901,129.591)
OP2: (-10.986,92.796,129.136)
C3': (-12.745,88.402,128.358)
C1': (-12.298,88.109,126.067)
C5': (-13.925,90.638,127.988)
O4': (-13.212,89.192,126.206)
C8: (-10.456,89.864,126.290)
O2': (-13.307,86.270,127.266)
C6: (-7.625,88.482,124.728)
C5: (-8.836,88.901,125.305)
C4: (-9.916,88.041,125.195)
P: (-12.440,92.629,128.876)
C4': (-13.756,89.207,127.554)
C2': (-12.354,87.310,127.371)
C2: (-8.732,86.558,124.079)
N1: (-7.606,87.281,124.110)
N3: (-9.931,86.841,124.586)
N6: (-6.503,89.201,124.760)
N7: (-9.192,90.052,125.996)
N9: (-10.955,88.658,125.852)
O5': (-12.645,91.285,128.044)
O3': (-13.260,87.901,129.591)
OP1: (-13.073,87.101,131.939)
OP2: (-11.264,88.631,130.967)
C3': (-9.959,83.787,129.954)
C1': (-9.524,84.083,127.675)
C5': (-12.184,85.062,129.902)
O6: (-4.777,87.665,126.996)
O4': (-10.821,84.590,127.963)
C8: (-8.709,86.441,128.192)
C2: (-5.598,84.381,125.917)
C6: (-5.460,86.647,126.844)
C5: (-6.773,86.389,127.306)
C4: (-7.342,85.166,127.029)
P: (-12.244,87.529,130.789)
C4': (-11.267,84.068,129.242)
C2': (-9.140,83.170,128.837)
O2': (-9.505,81.836,128.556)
N1: (-4.941,85.563,126.142)
N2: (-4.936,83.452,125.220)
N3: (-6.818,84.126,126.344)
N7: (-7.647,87.186,128.035)
N9: (-8.579,85.194,127.624)
O5': (-11.467,86.253,130.241)
O3': (-10.074,82.930,131.070)
OP2: (-11.264,88.631,130.967)
C3': (-9.959,83.787,129.954)
C1': (-9.524,84.083,127.675)
C5': (-12.184,85.062,129.902)
O6: (-4.777,87.665,126.996)
O4': (-10.821,84.590,127.963)
C8: (-8.709,86.441,128.192)
C2: (-5.598,84.381,125.917)
C6: (-5.460,86.647,126.844)
C5: (-6.773,86.389,127.306)
C4: (-7.342,85.166,127.029)
P: (-12.244,87.529,130.789)
C4': (-11.267,84.068,129.242)
C2': (-9.140,83.170,128.837)
O2': (-9.505,81.836,128.556)
N1: (-4.941,85.563,126.142)
N2: (-4.936,83.452,125.220)
N3: (-6.818,84.126,126.344)
N7: (-7.647,87.186,128.035)
N9: (-8.579,85.194,127.624)
O5': (-11.467,86.253,130.241)
O3': (-10.074,82.930,131.070)
Image (generated by PyMOL):