Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2961:2962
Extra
PDB:
ATOM 1 O3' A A 960 -40.769 -3.454 104.941 1.00 67.87 O
ATOM 2 P A A 961 -39.201 -3.229 105.224 1.00 64.12 P
ATOM 3 OP1 A A 961 -38.654 -4.548 105.653 1.00 65.13 O
ATOM 4 OP2 A A 961 -39.078 -2.061 106.151 1.00 63.88 O
ATOM 5 O5' A A 961 -38.638 -2.838 103.789 1.00 63.12 O
ATOM 6 C5' A A 961 -38.313 -3.832 102.846 1.00 63.25 C
ATOM 7 C4' A A 961 -38.311 -3.263 101.472 1.00 62.27 C
ATOM 8 O4' A A 961 -39.302 -2.212 101.399 1.00 61.68 O
ATOM 9 C3' A A 961 -37.027 -2.579 101.044 1.00 61.58 C
ATOM 10 O3' A A 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 11 C2' A A 961 -37.522 -1.634 99.948 1.00 60.58 C
ATOM 12 O2' A A 961 -37.794 -2.351 98.756 1.00 60.54 O
ATOM 13 C1' A A 961 -38.866 -1.193 100.523 1.00 60.67 C
ATOM 14 N9 A A 961 -38.779 0.089 101.272 1.00 60.25 N
ATOM 15 C8 A A 961 -38.893 0.265 102.633 1.00 60.78 C
ATOM 16 N7 A A 961 -38.783 1.510 103.038 1.00 60.27 N
ATOM 17 C5 A A 961 -38.596 2.222 101.877 1.00 59.35 C
ATOM 18 C6 A A 961 -38.414 3.591 101.660 1.00 58.53 C
ATOM 19 N6 A A 961 -38.403 4.512 102.618 1.00 58.50 N
ATOM 20 N1 A A 961 -38.251 4.003 100.394 1.00 57.77 N
ATOM 21 C2 A A 961 -38.282 3.055 99.439 1.00 57.86 C
ATOM 22 N3 A A 961 -38.441 1.732 99.505 1.00 58.59 N
ATOM 23 C4 A A 961 -38.600 1.370 100.781 1.00 59.32 C
ATOM 24 P G A 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 25 OP1 G A 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 26 OP2 G A 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 27 O5' G A 962 -33.999 -2.056 100.836 1.00 63.66 O
TER
ATOM 1 O3' A B 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 2 P G B 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 3 OP1 G B 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 4 OP2 G B 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 5 O5' G B 962 -33.999 -2.056 100.836 1.00 63.66 O
ATOM 6 C5' G B 962 -33.706 -1.781 99.476 1.00 62.92 C
ATOM 7 C4' G B 962 -33.705 -0.302 99.174 1.00 61.94 C
ATOM 8 O4' G B 962 -34.957 0.326 99.593 1.00 61.78 O
ATOM 9 C3' G B 962 -32.661 0.542 99.862 1.00 61.74 C
ATOM 10 O3' G B 962 -31.373 0.356 99.332 1.00 61.65 O
ATOM 11 C2' G B 962 -33.221 1.926 99.590 1.00 60.87 C
ATOM 12 O2' G B 962 -33.105 2.233 98.210 1.00 60.16 O
ATOM 13 C1' G B 962 -34.704 1.698 99.881 1.00 61.13 C
ATOM 14 N9 G B 962 -35.010 1.979 101.299 1.00 61.59 N
ATOM 15 C8 G B 962 -35.464 1.154 102.316 1.00 62.51 C
ATOM 16 N7 G B 962 -35.564 1.769 103.474 1.00 62.72 N
ATOM 17 C5 G B 962 -35.130 3.065 103.195 1.00 61.89 C
ATOM 18 C6 G B 962 -35.014 4.205 104.033 1.00 61.70 C
ATOM 19 O6 G B 962 -35.268 4.295 105.235 1.00 62.26 O
ATOM 20 N1 G B 962 -34.542 5.319 103.366 1.00 60.81 N
ATOM 21 C2 G B 962 -34.228 5.352 102.044 1.00 60.18 C
ATOM 22 N2 G B 962 -33.791 6.538 101.588 1.00 59.41 N
ATOM 23 N3 G B 962 -34.348 4.309 101.239 1.00 60.34 N
ATOM 24 C4 G B 962 -34.788 3.207 101.870 1.00 61.19 C
ATOM 25 P U B 963 -30.139 -0.027 100.283 1.00 59.48 P
ATOM 26 OP1 U B 963 -29.211 -0.846 99.470 1.00 59.66 O
ATOM 27 OP2 U B 963 -30.697 -0.602 101.506 1.00 60.32 O
ATOM 28 O5' U B 963 -29.487 1.383 100.610 1.00 58.85 O
TER
ATOM 2 P A A 961 -39.201 -3.229 105.224 1.00 64.12 P
ATOM 3 OP1 A A 961 -38.654 -4.548 105.653 1.00 65.13 O
ATOM 4 OP2 A A 961 -39.078 -2.061 106.151 1.00 63.88 O
ATOM 5 O5' A A 961 -38.638 -2.838 103.789 1.00 63.12 O
ATOM 6 C5' A A 961 -38.313 -3.832 102.846 1.00 63.25 C
ATOM 7 C4' A A 961 -38.311 -3.263 101.472 1.00 62.27 C
ATOM 8 O4' A A 961 -39.302 -2.212 101.399 1.00 61.68 O
ATOM 9 C3' A A 961 -37.027 -2.579 101.044 1.00 61.58 C
ATOM 10 O3' A A 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 11 C2' A A 961 -37.522 -1.634 99.948 1.00 60.58 C
ATOM 12 O2' A A 961 -37.794 -2.351 98.756 1.00 60.54 O
ATOM 13 C1' A A 961 -38.866 -1.193 100.523 1.00 60.67 C
ATOM 14 N9 A A 961 -38.779 0.089 101.272 1.00 60.25 N
ATOM 15 C8 A A 961 -38.893 0.265 102.633 1.00 60.78 C
ATOM 16 N7 A A 961 -38.783 1.510 103.038 1.00 60.27 N
ATOM 17 C5 A A 961 -38.596 2.222 101.877 1.00 59.35 C
ATOM 18 C6 A A 961 -38.414 3.591 101.660 1.00 58.53 C
ATOM 19 N6 A A 961 -38.403 4.512 102.618 1.00 58.50 N
ATOM 20 N1 A A 961 -38.251 4.003 100.394 1.00 57.77 N
ATOM 21 C2 A A 961 -38.282 3.055 99.439 1.00 57.86 C
ATOM 22 N3 A A 961 -38.441 1.732 99.505 1.00 58.59 N
ATOM 23 C4 A A 961 -38.600 1.370 100.781 1.00 59.32 C
ATOM 24 P G A 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 25 OP1 G A 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 26 OP2 G A 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 27 O5' G A 962 -33.999 -2.056 100.836 1.00 63.66 O
TER
ATOM 1 O3' A B 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 2 P G B 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 3 OP1 G B 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 4 OP2 G B 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 5 O5' G B 962 -33.999 -2.056 100.836 1.00 63.66 O
ATOM 6 C5' G B 962 -33.706 -1.781 99.476 1.00 62.92 C
ATOM 7 C4' G B 962 -33.705 -0.302 99.174 1.00 61.94 C
ATOM 8 O4' G B 962 -34.957 0.326 99.593 1.00 61.78 O
ATOM 9 C3' G B 962 -32.661 0.542 99.862 1.00 61.74 C
ATOM 10 O3' G B 962 -31.373 0.356 99.332 1.00 61.65 O
ATOM 11 C2' G B 962 -33.221 1.926 99.590 1.00 60.87 C
ATOM 12 O2' G B 962 -33.105 2.233 98.210 1.00 60.16 O
ATOM 13 C1' G B 962 -34.704 1.698 99.881 1.00 61.13 C
ATOM 14 N9 G B 962 -35.010 1.979 101.299 1.00 61.59 N
ATOM 15 C8 G B 962 -35.464 1.154 102.316 1.00 62.51 C
ATOM 16 N7 G B 962 -35.564 1.769 103.474 1.00 62.72 N
ATOM 17 C5 G B 962 -35.130 3.065 103.195 1.00 61.89 C
ATOM 18 C6 G B 962 -35.014 4.205 104.033 1.00 61.70 C
ATOM 19 O6 G B 962 -35.268 4.295 105.235 1.00 62.26 O
ATOM 20 N1 G B 962 -34.542 5.319 103.366 1.00 60.81 N
ATOM 21 C2 G B 962 -34.228 5.352 102.044 1.00 60.18 C
ATOM 22 N2 G B 962 -33.791 6.538 101.588 1.00 59.41 N
ATOM 23 N3 G B 962 -34.348 4.309 101.239 1.00 60.34 N
ATOM 24 C4 G B 962 -34.788 3.207 101.870 1.00 61.19 C
ATOM 25 P U B 963 -30.139 -0.027 100.283 1.00 59.48 P
ATOM 26 OP1 U B 963 -29.211 -0.846 99.470 1.00 59.66 O
ATOM 27 OP2 U B 963 -30.697 -0.602 101.506 1.00 60.32 O
ATOM 28 O5' U B 963 -29.487 1.383 100.610 1.00 58.85 O
TER
Atoms:
OP1: (-38.654,-4.548,105.653)
OP2: (-39.078,-2.061,106.151)
C3': (-37.027,-2.579,101.044)
C1': (-38.866,-1.193,100.523)
C5': (-38.313,-3.832,102.846)
O4': (-39.302,-2.212,101.399)
C8: (-38.893,0.265,102.633)
O2': (-37.794,-2.351,98.756)
C6: (-38.414,3.591,101.660)
C5: (-38.596,2.222,101.877)
C4: (-38.600,1.370,100.781)
P: (-39.201,-3.229,105.224)
C4': (-38.311,-3.263,101.472)
C2': (-37.522,-1.634,99.948)
C2: (-38.282,3.055,99.439)
N1: (-38.251,4.003,100.394)
N3: (-38.441,1.732,99.505)
N6: (-38.403,4.512,102.618)
N7: (-38.783,1.510,103.038)
N9: (-38.779,0.089,101.272)
O5': (-38.638,-2.838,103.789)
O3': (-36.024,-3.505,100.618)
OP2: (-39.078,-2.061,106.151)
C3': (-37.027,-2.579,101.044)
C1': (-38.866,-1.193,100.523)
C5': (-38.313,-3.832,102.846)
O4': (-39.302,-2.212,101.399)
C8: (-38.893,0.265,102.633)
O2': (-37.794,-2.351,98.756)
C6: (-38.414,3.591,101.660)
C5: (-38.596,2.222,101.877)
C4: (-38.600,1.370,100.781)
P: (-39.201,-3.229,105.224)
C4': (-38.311,-3.263,101.472)
C2': (-37.522,-1.634,99.948)
C2: (-38.282,3.055,99.439)
N1: (-38.251,4.003,100.394)
N3: (-38.441,1.732,99.505)
N6: (-38.403,4.512,102.618)
N7: (-38.783,1.510,103.038)
N9: (-38.779,0.089,101.272)
O5': (-38.638,-2.838,103.789)
O3': (-36.024,-3.505,100.618)
OP1: (-33.766,-4.558,100.619)
OP2: (-34.712,-3.516,102.731)
C3': (-32.661,0.542,99.862)
C1': (-34.704,1.698,99.881)
C5': (-33.706,-1.781,99.476)
O6: (-35.268,4.295,105.235)
O4': (-34.957,0.326,99.593)
C8: (-35.464,1.154,102.316)
C2: (-34.228,5.352,102.044)
C6: (-35.014,4.205,104.033)
C5: (-35.130,3.065,103.195)
C4: (-34.788,3.207,101.870)
P: (-34.550,-3.482,101.272)
C4': (-33.705,-0.302,99.174)
C2': (-33.221,1.926,99.590)
O2': (-33.105,2.233,98.210)
N1: (-34.542,5.319,103.366)
N2: (-33.791,6.538,101.588)
N3: (-34.348,4.309,101.239)
N7: (-35.564,1.769,103.474)
N9: (-35.010,1.979,101.299)
O5': (-33.999,-2.056,100.836)
O3': (-31.373,0.356,99.332)
OP2: (-34.712,-3.516,102.731)
C3': (-32.661,0.542,99.862)
C1': (-34.704,1.698,99.881)
C5': (-33.706,-1.781,99.476)
O6: (-35.268,4.295,105.235)
O4': (-34.957,0.326,99.593)
C8: (-35.464,1.154,102.316)
C2: (-34.228,5.352,102.044)
C6: (-35.014,4.205,104.033)
C5: (-35.130,3.065,103.195)
C4: (-34.788,3.207,101.870)
P: (-34.550,-3.482,101.272)
C4': (-33.705,-0.302,99.174)
C2': (-33.221,1.926,99.590)
O2': (-33.105,2.233,98.210)
N1: (-34.542,5.319,103.366)
N2: (-33.791,6.538,101.588)
N3: (-34.348,4.309,101.239)
N7: (-35.564,1.769,103.474)
N9: (-35.010,1.979,101.299)
O5': (-33.999,-2.056,100.836)
O3': (-31.373,0.356,99.332)
Image (generated by PyMOL):